MGE detailed information
MGE type: Prophage MGE length: 56429 bp
Accession: NZ_CP062758 Location: 2565627..2622055 Organism: Escherichia coli O157:H7 strain Z892 Replicon: chromosome
Accession: NZ_CP062758 Location: 2565627..2622055 Organism: Escherichia coli O157:H7 strain Z892 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ILQ38_RS12895 () | 2561527..2562747 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| ILQ38_RS12900 () | 2562872..2563567 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| ILQ38_RS12905 () | 2563520..2564812 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| ILQ38_RS12910 () | 2564970..2565584 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| ILQ38_RS12915 () | 2565627..2566481 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| ILQ38_RS12920 () | 2566483..2567100 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| ILQ38_RS12925 () | 2567111..2569534 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| ILQ38_RS12930 () | 2569595..2572021 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| ILQ38_RS12935 () | 2572220..2572525 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| ILQ38_RS12940 () | 2572633..2573343 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| ILQ38_RS12945 () | 2573346..2573906 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| ILQ38_RS12950 () | 2573941..2574282 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| ILQ38_RS12955 () | 2574417..2574743 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| ILQ38_RS12960 () | 2575513..2575697 | - | 185 | Protein_2530 | DUF3596 domain-containing protein | - |
| ILQ38_RS12965 () | 2575732..2575983 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| ILQ38_RS12970 () | 2576056..2578527 | - | 2472 | WP_000048458.1 | exonuclease | - |
| ILQ38_RS12975 () | 2578620..2578811 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| ILQ38_RS12980 () | 2578808..2578996 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| ILQ38_RS12985 () | 2579565..2579783 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| ILQ38_RS12990 () | 2579855..2580154 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| ILQ38_RS12995 () | 2580507..2580785 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ILQ38_RS13000 () | 2580787..2580978 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| ILQ38_RS13005 () | 2580999..2581370 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| ILQ38_RS13010 () | 2581468..2581770 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| ILQ38_RS13015 () | 2581767..2582192 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| ILQ38_RS13020 () | 2582215..2583177 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| ILQ38_RS13025 () | 2583184..2583924 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| ILQ38_RS13030 () | 2583950..2584719 | + | 770 | Protein_2544 | DUF1627 domain-containing protein | - |
| ILQ38_RS13035 () | 2584735..2585130 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| ILQ38_RS13040 () | 2585187..2585771 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| ILQ38_RS13045 () | 2585887..2585991 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| ILQ38_RS13050 () | 2586237..2586392 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| ILQ38_RS13055 () | 2586560..2586838 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| ILQ38_RS13060 () | 2586840..2587889 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| ILQ38_RS13065 () | 2587902..2588261 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ILQ38_RS13070 () | 2588258..2588947 | + | 690 | WP_001059381.1 | antiterminator | - |
| ILQ38_RS13090 () | 2589585..2590013 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| ILQ38_RS13095 () | 2590010..2590265 | + | 256 | Protein_2554 | DUF3927 family protein | - |
| ILQ38_RS13100 () | 2590492..2592342 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| ILQ38_RS13105 () | 2592782..2592997 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| ILQ38_RS13110 () | 2593002..2593346 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| ILQ38_RS13115 () | 2593397..2593930 | + | 534 | WP_000992137.1 | lysozyme | - |
| ILQ38_RS13120 () | 2594201..2594770 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| ILQ38_RS13125 () | 2594770..2594916 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| ILQ38_RS13130 () | 2595144..2595329 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| ILQ38_RS13135 () | 2595754..2595981 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| ILQ38_RS13140 () | 2596023..2596388 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| ILQ38_RS13145 () | 2596678..2597241 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| ILQ38_RS13150 () | 2597238..2598899 | + | 1662 | WP_038425863.1 | terminase large subunit | - |
| ILQ38_RS13155 () | 2598963..2600900 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| ILQ38_RS13160 () | 2600945..2601166 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| ILQ38_RS13165 () | 2601112..2603691 | + | 2580 | WP_072612732.1 | phage portal protein | - |
| ILQ38_RS13170 () | 2603694..2604020 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| ILQ38_RS13175 () | 2604030..2604380 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| ILQ38_RS13180 () | 2604377..2604823 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| ILQ38_RS13185 () | 2604820..2605164 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| ILQ38_RS13190 () | 2605230..2605946 | + | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| ILQ38_RS13195 () | 2605961..2606335 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| ILQ38_RS13200 () | 2606431..2606640 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| ILQ38_RS13205 () | 2606688..2609768 | + | 3081 | WP_000212814.1 | phage tail tape measure protein | - |
| ILQ38_RS13210 () | 2609761..2610102 | + | 342 | WP_000807954.1 | phage tail protein | - |
| ILQ38_RS13215 () | 2610102..2610800 | + | 699 | WP_001179510.1 | phage minor tail protein L | - |
| ILQ38_RS13220 () | 2610811..2611554 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| ILQ38_RS13225 () | 2611500..2612132 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| ILQ38_RS13230 () | 2612475..2613650 | + | 1176 | WP_206396604.1 | host specificity protein J | - |
| ILQ38_RS13235 () | 2613602..2615947 | + | 2346 | WP_129137390.1 | host specificity protein J | - |
| ILQ38_RS13240 () | 2616015..2616614 | + | 600 | WP_001228304.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| ILQ38_RS13245 () | 2616766..2618079 | + | 1314 | WP_000216532.1 | phage tail protein | - |
| ILQ38_RS13250 () | 2618081..2618350 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| ILQ38_RS13255 () | 2618463..2619037 | + | 575 | Protein_2586 | DUF1076 domain-containing protein | - |
| ILQ38_RS13260 () | 2619377..2620702 | - | 1326 | WP_001025672.1 | type III secretion system effector NleA | - |
| ILQ38_RS13265 () | 2621363..2622277 | - | 915 | Protein_2588 | tyrosine-type recombinase/integrase | - |
| ILQ38_RS13270 () | 2622300..2622422 | + | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| ILQ38_RS13275 () | 2622529..2623440 | + | 912 | WP_000950979.1 | type III secretion system effector kinase NleH1-2 | - |
| ILQ38_RS13280 () | 2623506..2624075 | + | 570 | WP_000938103.1 | T3SS effector caspase inhibitor NleF | - |
| ILQ38_RS13285 () | 2624122..2624756 | - | 635 | Protein_2592 | transposase | - |
| ILQ38_RS13290 () | 2625041..2626579 | - | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| ILQ38_RS13295 () | 2626629..2626976 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0.007 |