MGE detailed information
MGE type: Prophage MGE length: 59313 bp
Accession: NZ_CP062348 Location: 1747145..1806457 Organism: Staphylococcus aureus strain NAS_AN_260 Replicon: chromosome
Accession: NZ_CP062348 Location: 1747145..1806457 Organism: Staphylococcus aureus strain NAS_AN_260 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF738_RS08785 (1742605) | 1742605..1743285 | - | 681 | WP_000645726.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| IF738_RS08790 (1743286) | 1743286..1744182 | - | 897 | WP_000991301.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| IF738_RS08795 (1744179) | 1744179..1744559 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| IF738_RS08800 (1744818) | 1744818..1744994 | - | 177 | WP_000681968.1 | hypothetical protein | - |
| IF738_RS08805 (1745237) | 1745237..1745335 | - | 99 | WP_000990056.1 | hypothetical protein | - |
| IF738_RS08810 (1745535) | 1745535..1746821 | + | 1287 | WP_001068523.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| IF738_RS08815 (1747145) | 1747145..1747435 | - | 291 | WP_001792929.1 | hypothetical protein | VF |
| IF738_RS08820 (1747450) | 1747450..1747818 | - | 369 | WP_223200632.1 | hypothetical protein | VF |
| IF738_RS08825 (1747792) | 1747792..1749195 | - | 1404 | Protein_1702 | hypothetical protein | VF |
| IF738_RS08830 (1749584) | 1749584..1749781 | + | 198 | WP_000239610.1 | hypothetical protein | VF |
| IF738_RS08835 (1750153) | 1750153..1750332 | + | 180 | WP_000669792.1 | hypothetical protein | - |
| IF738_RS08840 (1750643) | 1750643..1750903 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| IF738_RS08845 (1750956) | 1750956..1751306 | - | 351 | WP_000702263.1 | hypothetical protein | VF |
| IF738_RS08850 (1751818) | 1751818..1752153 | - | 336 | Protein_1707 | SH3 domain-containing protein | - |
| IF738_RS08855 (1752804) | 1752804..1753295 | - | 492 | WP_000920038.1 | hypothetical protein | VF |
| IF738_RS08860 (1753486) | 1753486..1754241 | - | 756 | WP_000861027.1 | CHAP domain-containing protein | - |
| IF738_RS08865 (1754253) | 1754253..1754507 | - | 255 | WP_000611512.1 | phage holin | - |
| IF738_RS08870 (1754559) | 1754559..1754666 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - (1754588) | 1754588..1754727 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (1754588) | 1754588..1754727 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (1754588) | 1754588..1754727 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (1754588) | 1754588..1754727 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| IF738_RS08875 (1754719) | 1754719..1754895 | - | 177 | WP_011447039.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| IF738_RS08880 (1755004) | 1755004..1755777 | - | 774 | WP_000750412.1 | hypothetical protein | VF |
| IF738_RS08885 (1756150) | 1756150..1756524 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| IF738_RS08890 (1756580) | 1756580..1756867 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| IF738_RS08895 (1756913) | 1756913..1757065 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| IF738_RS08900 (1757058) | 1757058..1760840 | - | 3783 | WP_000582131.1 | phage tail spike protein | - |
| IF738_RS08905 (1760856) | 1760856..1762346 | - | 1491 | WP_001154317.1 | phage tail family protein | - |
| IF738_RS08910 (1762346) | 1762346..1766995 | - | 4650 | WP_001133533.1 | phage tail tape measure protein | - |
| IF738_RS08915 (1767051) | 1767051..1767173 | - | 123 | WP_000570353.1 | hypothetical protein | - |
| IF738_RS08920 (1767233) | 1767233..1767679 | - | 447 | WP_000442601.1 | hypothetical protein | - |
| IF738_RS08925 (1767744) | 1767744..1768697 | - | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| IF738_RS08930 (1768698) | 1768698..1769078 | - | 381 | WP_000611454.1 | hypothetical protein | - |
| IF738_RS08935 (1769075) | 1769075..1769452 | - | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| IF738_RS08940 (1769452) | 1769452..1769787 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| IF738_RS08945 (1769774) | 1769774..1770106 | - | 333 | WP_001177483.1 | head-tail connector protein | - |
| IF738_RS08950 (1770115) | 1770115..1770273 | - | 159 | WP_001252099.1 | hypothetical protein | - |
| IF738_RS08955 (1770309) | 1770309..1771556 | - | 1248 | WP_000849950.1 | phage major capsid protein | - |
| IF738_RS08960 (1771644) | 1771644..1772228 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| IF738_RS08965 (1772221) | 1772221..1773471 | - | 1251 | WP_000511067.1 | phage portal protein | - |
| IF738_RS08970 (1773477) | 1773477..1773677 | - | 201 | WP_000365300.1 | hypothetical protein | - |
| IF738_RS08975 (1773691) | 1773691..1775385 | - | 1695 | WP_000133304.1 | phage terminase family protein | - |
| IF738_RS08980 (1775388) | 1775388..1775855 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| IF738_RS08985 (1775985) | 1775985..1776329 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| IF738_RS08990 (1776345) | 1776345..1776797 | - | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| IF738_RS08995 (1776912) | 1776912..1777382 | - | 471 | WP_000282755.1 | hypothetical protein | - |
| IF738_RS09000 (1777405) | 1777405..1777605 | - | 201 | WP_001570807.1 | DUF1514 family protein | - |
| IF738_RS09005 (1777605) | 1777605..1778255 | - | 651 | WP_001005262.1 | hypothetical protein | - |
| IF738_RS09010 (1778414) | 1778414..1778563 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| IF738_RS09015 (1778560) | 1778560..1778655 | - | 96 | Protein_1740 | DUF1381 domain-containing protein | - |
| IF738_RS09020 (1778640) | 1778640..1778891 | - | 252 | Protein_1741 | SA1788 family PVL leukocidin-associated protein | - |
| IF738_RS09025 (1778904) | 1778904..1779308 | - | 405 | WP_000401978.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IF738_RS09030 (1779317) | 1779317..1779535 | - | 219 | WP_000338527.1 | hypothetical protein | - |
| IF738_RS09035 (1779542) | 1779542..1780435 | - | 894 | WP_000148328.1 | DnaD domain-containing protein | - |
| IF738_RS09040 (1780465) | 1780465..1780935 | - | 471 | WP_000934765.1 | single-stranded DNA-binding protein | - |
| IF738_RS09045 (1780936) | 1780936..1781553 | - | 618 | WP_072353921.1 | MBL fold metallo-hydrolase | - |
| IF738_RS09050 (1781634) | 1781634..1782554 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| IF738_RS09055 (1782556) | 1782556..1784511 | - | 1956 | WP_064138715.1 | AAA family ATPase | - |
| IF738_RS09060 (1784508) | 1784508..1784771 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| IF738_RS09065 (1784780) | 1784780..1785040 | - | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| IF738_RS09070 (1785133) | 1785133..1785294 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| IF738_RS09075 (1785291) | 1785291..1785611 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| IF738_RS09080 (1785670) | 1785670..1786302 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| IF738_RS09085 (1786317) | 1786317..1786457 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| IF738_RS09090 (1786488) | 1786488..1786685 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| IF738_RS09095 (1786701) | 1786701..1787450 | - | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| IF738_RS09100 (1787507) | 1787507..1788046 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| IF738_RS09105 (1788070) | 1788070..1788330 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| IF738_RS09110 (1788348) | 1788348..1788572 | - | 225 | WP_000338186.1 | DUF739 family protein | - |
| IF738_RS09115 (1788730) | 1788730..1789500 | + | 771 | WP_001208482.1 | S24 family peptidase | - |
| IF738_RS09120 (1789696) | 1789696..1790424 | + | 729 | WP_001033320.1 | hypothetical protein | VF |
| IF738_RS09125 (1790448) | 1790448..1791176 | + | 729 | WP_000733771.1 | hypothetical protein | VF |
| IF738_RS09130 (1791260) | 1791260..1792297 | + | 1038 | WP_000857182.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IF738_RS09135 (1792348) | 1792348..1793178 | + | 831 | Protein_1764 | hypothetical protein | VF |
| IF738_RS09140 (1793416) | 1793416..1794432 | - | 1017 | WP_000595401.1 | hypothetical protein | VF |
| IF738_RS09145 (1794454) | 1794454..1795506 | - | 1053 | WP_000791417.1 | hypothetical protein | VF |
| IF738_RS09150 (1795942) | 1795942..1797165 | + | 1224 | WP_000206623.1 | ArgE/DapE family deacylase | - |
| IF738_RS09155 (1797537) | 1797537..1798382 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| IF738_RS09160 (1798444) | 1798444..1799355 | - | 912 | WP_000825510.1 | hypothetical protein | VF |
| IF738_RS09165 (1799495) | 1799495..1800823 | + | 1329 | WP_149861555.1 | TrkH family potassium uptake protein | - |
| IF738_RS09170 (1801677) | 1801677..1802120 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| IF738_RS09175 (1802226) | 1802226..1802663 | - | 438 | WP_072419900.1 | hypothetical protein | - |
| IF738_RS09180 (1802980) | 1802980..1803570 | - | 591 | WP_001293059.1 | terminase small subunit | - |
| IF738_RS09185 (1803567) | 1803567..1803779 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| IF738_RS09190 (1803840) | 1803840..1804386 | + | 547 | Protein_1775 | site-specific integrase | - |
| IF738_RS09195 (1804481) | 1804481..1806097 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| IF738_RS09200 (1806173) | 1806173..1806457 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| IF738_RS09205 (1806632) | 1806632..1807375 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease MroQ | - |
| IF738_RS09210 (1807400) | 1807400..1808659 | - | 1260 | WP_000120305.1 | SdrH family protein | - |
| IF738_RS09215 (1808856) | 1808856..1809482 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| IF738_RS09220 (1809843) | 1809843..1810628 | + | 786 | WP_000867941.1 | carbon-nitrogen family hydrolase | - |
| IF738_RS14610 (1811227) | 1811227..1811361 | - | 135 | WP_275672303.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus MW2 | Prophage | TA10154 | NC_003923 | 2047408..2102909 | 0.002 |