MGE detailed information
MGE type: Prophage MGE length: 22914 bp
Accession: NZ_CP062249 Location: 1626458..1649371 Organism: Escherichia coli strain AML002_ev01 Replicon: chromosome
Accession: NZ_CP062249 Location: 1626458..1649371 Organism: Escherichia coli strain AML002_ev01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHN46_RS07890 () | 1622973..1623719 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| IHN46_RS07895 () | 1623808..1624494 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| IHN46_RS07900 () | 1624671..1624874 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| IHN46_RS07905 () | 1624909..1626369 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| IHN46_RS07910 () | 1626458..1627825 | - | 1368 | Protein_1545 | MHS family MFS transporter | - |
| IHN46_RS07915 () | 1628346..1628459 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| IHN46_RS07920 () | 1628528..1628761 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| IHN46_RS07925 () | 1629078..1629668 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IHN46_RS07930 () | 1629766..1630341 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| IHN46_RS07935 () | 1630341..1631303 | - | 963 | WP_001027733.1 | phage tail protein | - |
| IHN46_RS07940 () | 1631254..1631823 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| IHN46_RS07945 () | 1632212..1632445 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| IHN46_RS07950 () | 1632503..1632913 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| IHN46_RS07955 () | 1633065..1633238 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| IHN46_RS07960 () | 1633410..1633565 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| IHN46_RS07965 () | 1633644..1633709 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| IHN46_RS07970 () | 1633712..1633900 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| IHN46_RS07975 () | 1633911..1634123 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| IHN46_RS07980 () | 1634486..1634983 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| IHN46_RS07985 () | 1634980..1635513 | - | 534 | WP_001092971.1 | lysozyme | - |
| IHN46_RS07990 () | 1635510..1635821 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| IHN46_RS07995 () | 1635826..1636041 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| IHN46_RS08000 () | 1636795..1637010 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| IHN46_RS08005 () | 1637311..1637523 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| IHN46_RS08010 () | 1637578..1637667 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| IHN46_RS08015 () | 1637945..1638697 | - | 753 | WP_001047135.1 | antitermination protein | - |
| IHN46_RS08020 () | 1638711..1639760 | - | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| IHN46_RS08025 () | 1639762..1640040 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| IHN46_RS08030 () | 1640107..1640358 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| IHN46_RS08035 () | 1640575..1640730 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IHN46_RS08040 () | 1640802..1641089 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IHN46_RS08045 () | 1641089..1641328 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IHN46_RS08050 () | 1641353..1641658 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| IHN46_RS08055 () | 1641861..1642193 | + | 333 | WP_001301033.1 | protein FlxA | - |
| IHN46_RS08060 () | 1642630..1642779 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| IHN46_RS08065 () | 1642814..1643092 | - | 279 | Protein_1576 | hypothetical protein | - |
| IHN46_RS08070 () | 1643076..1643306 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| IHN46_RS08075 () | 1643390..1643797 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| IHN46_RS08080 () | 1643964..1644119 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| IHN46_RS08085 () | 1644279..1644497 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| IHN46_RS08090 () | 1645065..1645253 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| IHN46_RS08095 () | 1645250..1645441 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| IHN46_RS08100 () | 1645534..1646301 | + | 768 | Protein_1583 | exonuclease | - |
| IHN46_RS08105 () | 1646298..1646993 | + | 696 | Protein_1584 | IS3 family transposase IS2 | Transposase |
| IHN46_RS08110 () | 1647007..1648164 | + | 1158 | Protein_1585 | Putative defective protein IntQ ; Integrase | Integrase |
| IHN46_RS08115 () | 1648184..1648294 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| IHN46_RS08120 () | 1648352..1649371 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| IHN46_RS08125 () | 1649383..1650597 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| IHN46_RS08130 () | 1650803..1651129 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| IHN46_RS08135 () | 1651264..1651605 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| IHN46_RS08140 () | 1651640..1652200 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| IHN46_RS08145 () | 1652203..1652913 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| IHN46_RS08150 () | 1653021..1653326 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.001 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.001 |