MGE detailed information
MGE type: Prophage MGE length: 22914 bp
Accession: NZ_CP062247 Location: 1626462..1649375 Organism: Escherichia coli strain AML002_ev03 Replicon: chromosome
Accession: NZ_CP062247 Location: 1626462..1649375 Organism: Escherichia coli strain AML002_ev03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHN48_RS07890 () | 1622977..1623723 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| IHN48_RS07895 () | 1623812..1624498 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| IHN48_RS07900 () | 1624675..1624878 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| IHN48_RS07905 () | 1624913..1626373 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| IHN48_RS07910 () | 1626462..1627829 | - | 1368 | Protein_1545 | MHS family MFS transporter | - |
| IHN48_RS07915 () | 1628350..1628463 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| IHN48_RS07920 () | 1628532..1628765 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| IHN48_RS07925 () | 1629082..1629672 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IHN48_RS07930 () | 1629770..1630345 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| IHN48_RS07935 () | 1630345..1631307 | - | 963 | WP_001027733.1 | phage tail protein | - |
| IHN48_RS07940 () | 1631258..1631827 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| IHN48_RS07945 () | 1632216..1632449 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| IHN48_RS07950 () | 1632507..1632917 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| IHN48_RS07955 () | 1633069..1633242 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| IHN48_RS07960 () | 1633414..1633569 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| IHN48_RS07965 () | 1633648..1633713 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| IHN48_RS07970 () | 1633716..1633904 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| IHN48_RS07975 () | 1633915..1634127 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| IHN48_RS07980 () | 1634490..1634987 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| IHN48_RS07985 () | 1634984..1635517 | - | 534 | WP_001092971.1 | lysozyme | - |
| IHN48_RS07990 () | 1635514..1635825 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| IHN48_RS07995 () | 1635830..1636045 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| IHN48_RS08000 () | 1636799..1637014 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| IHN48_RS08005 () | 1637315..1637527 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| IHN48_RS08010 () | 1637582..1637671 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| IHN48_RS08015 () | 1637949..1638701 | - | 753 | WP_001047135.1 | antitermination protein | - |
| IHN48_RS08020 () | 1638715..1639764 | - | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| IHN48_RS08025 () | 1639766..1640044 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| IHN48_RS08030 () | 1640111..1640362 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| IHN48_RS08035 () | 1640579..1640734 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IHN48_RS08040 () | 1640806..1641093 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IHN48_RS08045 () | 1641093..1641332 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IHN48_RS08050 () | 1641357..1641662 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| IHN48_RS08055 () | 1641865..1642197 | + | 333 | WP_001301033.1 | protein FlxA | - |
| IHN48_RS08060 () | 1642634..1642783 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| IHN48_RS08065 () | 1642818..1643096 | - | 279 | Protein_1576 | hypothetical protein | - |
| IHN48_RS08070 () | 1643080..1643310 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| IHN48_RS08075 () | 1643394..1643801 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| IHN48_RS08080 () | 1643968..1644123 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| IHN48_RS08085 () | 1644283..1644501 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| IHN48_RS08090 () | 1645069..1645257 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| IHN48_RS08095 () | 1645254..1645445 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| IHN48_RS08100 () | 1645538..1646305 | + | 768 | Protein_1583 | exonuclease | - |
| IHN48_RS08105 () | 1646302..1646997 | + | 696 | Protein_1584 | IS3 family transposase IS2 | Transposase |
| IHN48_RS08110 () | 1647011..1648168 | + | 1158 | Protein_1585 | Putative defective protein IntQ ; Integrase | Integrase |
| IHN48_RS08115 () | 1648188..1648298 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| IHN48_RS08120 () | 1648356..1649375 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| IHN48_RS08125 () | 1649387..1650601 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| IHN48_RS08130 () | 1650807..1651133 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| IHN48_RS08135 () | 1651268..1651609 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| IHN48_RS08140 () | 1651644..1652204 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| IHN48_RS08145 () | 1652207..1652917 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| IHN48_RS08150 () | 1653025..1653330 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.001 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.001 |