NZ_CP0622411406257..1427931

MGE detailed information

MGE type: Prophage        MGE length: 21675 bp
Accession: NZ_CP062241        Location: 1406257..1427931         Organism: Escherichia coli strain AML001_ev01       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
IHN54_RS06885 () 1402307..1403290 + 984 WP_000387388.1 zinc transporter ZntB -
IHN54_RS06890 () 1403768..1405141 + 1374 WP_000123737.1 ATP-dependent RNA helicase DbpA -
IHN54_RS06895 () 1405270..1406205 - 936 WP_001157406.1 tRNA 2-thiocytidine(32) synthetase TtcA -
IHN54_RS06900 () 1406257..1407492 - 1236 WP_000040852.1 Putative defective protein IntQ ; Integrase Integrase
IHN54_RS06905 () 1407494..1407709 - 216 WP_000079604.1 excisionase XisR -
IHN54_RS06910 () 1407788..1407997 - 210 WP_000276809.1 double-strand break reduction protein RcbA -
- () 1407813..1407991 + 179 NuclAT_0 - Antitoxin Detail
- () 1407813..1407991 + 179 NuclAT_0 - Antitoxin Detail
- () 1407813..1407991 + 179 NuclAT_0 - Antitoxin Detail
- () 1407813..1407991 + 179 NuclAT_0 - Antitoxin Detail
IHN54_RS06915 () 1407990..1408184 - 195 WP_001317028.1 type I toxin-antitoxin system endodeoxyribonuclease toxin RalR Toxin Detail
IHN54_RS06920 () 1408241..1409050 - 810 WP_000166319.1 recombination protein RecT -
IHN54_RS06925 () 1409043..1411643 - 2601 WP_000105143.1 exodeoxyribonuclease VIII -
IHN54_RS06930 () 1411745..1412020 - 276 WP_000632297.1 protein RacC -
IHN54_RS06935 () 1412095..1412265 - 171 WP_001352098.1 conserved protein, Rac prophage -
IHN54_RS06940 () 1412265..1412486 - 222 WP_000560225.1 killing protein KilR -
IHN54_RS06945 () 1412928..1413416 + 489 WP_001312793.1 superinfection exclusion protein B -
IHN54_RS06950 () 1413413..1413568 - 156 WP_001169151.1 YdaF family protein -
IHN54_RS06955 () 1414022..1414498 - 477 WP_000948459.1 DNA-binding transcriptional repressor RacR -
IHN54_RS06960 () 1414622..1414918 + 297 WP_000712069.1 toxin YdaS -
IHN54_RS06965 () 1414941..1415363 + 423 WP_000693797.1 phage protein -
IHN54_RS06970 () 1415376..1416233 + 858 WP_000899748.1 DUF1376 domain-containing protein -
IHN54_RS06975 () 1416240..1416986 + 747 WP_000788970.1 ATP-binding protein -
IHN54_RS06980 () 1417009..1417569 + 561 WP_000450663.1 DUF1627 domain-containing protein -
IHN54_RS06985 () 1417657..1417842 + 186 WP_001228696.1 prophage lysis lipoprotein RzoD -
IHN54_RS06990 () 1418039..1419496 + 1458 WP_001097895.1 Trk system potassium transporter TrkG -
IHN54_RS06995 () 1419634..1419897 + 264 WP_001350510.1 ParB/Srx family N-terminal domain-containing protein -
IHN54_RS07000 () 1419878..1420237 + 360 WP_000091628.1 hypothetical protein -
IHN54_RS07005 () 1420711..1421643 + 933 Protein_1364 phage tail length tape measure family protein -
IHN54_RS07010 () 1421646..1421861 + 216 Protein_1365 Ail/Lom family outer membrane beta-barrel protein -
IHN54_RS07015 () 1422003..1422983 - 981 WP_000019448.1 IS5 family transposase ISKpn26 Transposase
IHN54_RS07020 () 1423053..1423241 + 189 Protein_1367 Ail/Lom family outer membrane beta-barrel protein -
IHN54_RS07025 () 1423306..1426668 + 3363 WP_000279097.1 prophage tail fiber N-terminal domain-containing protein -
IHN54_RS07030 () 1426668..1427243 + 576 WP_001698950.1 tail fiber assembly protein -
IHN54_RS07035 () 1427341..1427931 - 591 WP_000086527.1 Tn3 family transposase TnpR_ISSba14 Transposase
IHN54_RS07040 () 1428248..1428481 - 234 WP_000836770.1 cold shock protein YdfK -
IHN54_RS07045 () 1428550..1428663 - 114 WP_120795384.1 hypothetical protein -
IHN54_RS07050 () 1429442..1429876 - 435 WP_001300461.1 universal stress protein UspF -
IHN54_RS07055 () 1430017..1431150 - 1134 WP_000837921.1 porin OmpN -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Prophage TA20020 CP009789 1385172..1414104 0.008
Escherichia coli str. K-12 substr. MC4100 Prophage TA20061 HG738867 1300529..1322203 0
Escherichia coli str. K-12 substr. MG1655 Prophage TA6362 NC_000913 1412000..1433674 0
Escherichia coli str. K-12 substr. W3110 Prophage TA21432 NC_007779 1413714..1435388 0
Escherichia coli str. K-12 substr. DH10B Prophage TA22680 NC_010473 1499420..1521094 0
Escherichia coli BW2952 Prophage TA23848 NC_012759 1302083..1323757 0
Escherichia coli DH1 Prophage TA27398 NC_017638 1394182..1415856 0
Escherichia coli BW25113 Prophage TA48677 NZ_CP009273 1406257..1427931 0
Escherichia coli strain DH5alpha Prophage TA90473 NZ_CP025520 269442..291116 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Prophage TA285012 NZ_HG738867 1300529..1322203 0