MGE detailed information
MGE type: Genomic_island MGE length: 10616 bp
Accession: NZ_CP062160 Location: 5056164..5066779 Organism: Escherichia coli strain 20R2R Replicon: chromosome
Accession: NZ_CP062160 Location: 5056164..5066779 Organism: Escherichia coli strain 20R2R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEM32_RS24935 () | 5052025..5053233 | - | 1209 | WP_001301837.1 | propionate kinase | - |
| IEM32_RS24940 () | 5053259..5054590 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| IEM32_RS24945 () | 5054612..5055601 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| IEM32_RS24950 () | 5055700..5056550 | - | 851 | Protein_4865 | transcriptional regulator TdcA | - |
| IEM32_RS24955 () | 5056739..5057083 | + | 345 | WP_000145832.1 | transcriptional activator TdcR | - |
| IEM32_RS24960 () | 5057339..5057878 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| IEM32_RS24965 () | 5057900..5059087 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| IEM32_RS24975 () | 5059603..5060748 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| IEM32_RS24980 () | 5060845..5061735 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| IEM32_RS24985 () | 5061765..5062535 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| IEM32_RS24990 () | 5062551..5063885 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| IEM32_RS24995 () | 5064260..5065831 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| IEM32_RS25000 () | 5065980..5066315 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| IEM32_RS25005 () | 5066315..5066779 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| IEM32_RS25010 () | 5066834..5067643 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| IEM32_RS25015 () | 5067892..5069172 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| IEM32_RS25020 () | 5069195..5069668 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| IEM32_RS25025 () | 5069679..5070458 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| IEM32_RS25030 () | 5070448..5071326 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| IEM32_RS25035 () | 5071344..5071778 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.002 |