MGE detailed information
MGE type: Prophage MGE length: 61416 bp
Accession: NZ_CP062160 Location: 2855030..2916445 Organism: Escherichia coli strain 20R2R Replicon: chromosome
Accession: NZ_CP062160 Location: 2855030..2916445 Organism: Escherichia coli strain 20R2R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEM32_RS13730 () | 2850070..2851101 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| IEM32_RS13735 () | 2851345..2851602 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| IEM32_RS13740 () | 2851652..2852602 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| IEM32_RS13745 () | 2852754..2853506 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| IEM32_RS13750 () | 2853701..2854216 | - | 516 | WP_000945010.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| IEM32_RS13755 () | 2854227..2854988 | - | 762 | Protein_2678 | AbgT family transporter | - |
| IEM32_RS13765 () | 2856299..2857066 | - | 768 | Protein_2680 | AbgT family transporter | - |
| IEM32_RS13770 () | 2857103..2858548 | - | 1446 | WP_001156434.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| IEM32_RS13775 () | 2858548..2859858 | - | 1311 | WP_000444937.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| IEM32_RS13780 () | 2860034..2860942 | + | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| IEM32_RS13785 () | 2861272..2861835 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| IEM32_RS13790 () | 2861856..2863088 | - | 1233 | WP_000628061.1 | diguanylate cyclase DgcM | - |
| IEM32_RS13795 () | 2863343..2864326 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| IEM32_RS13800 () | 2864601..2864771 | + | 171 | WP_001625136.1 | hypothetical protein | - |
| IEM32_RS13805 () | 2864804..2866177 | + | 1374 | WP_000123746.1 | ATP-dependent RNA helicase DbpA | - |
| IEM32_RS13810 () | 2866306..2867241 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| IEM32_RS13815 () | 2867293..2868528 | - | 1236 | WP_000040839.1 | site-specific integrase | - |
| IEM32_RS13820 () | 2868530..2868745 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| IEM32_RS13825 () | 2868845..2869033 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 2868849..2869027 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2868849..2869027 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2868849..2869027 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2868849..2869027 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| IEM32_RS13830 () | 2869071..2869220 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| IEM32_RS13835 () | 2869276..2870085 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| IEM32_RS13840 () | 2870078..2872678 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| IEM32_RS13845 () | 2872780..2873055 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| IEM32_RS13850 () | 2873130..2873300 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| IEM32_RS13855 () | 2873300..2873521 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| IEM32_RS13860 () | 2873963..2874451 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| IEM32_RS13865 () | 2874448..2874603 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| IEM32_RS13870 () | 2874614..2874793 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| IEM32_RS13875 () | 2875036..2875455 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| IEM32_RS13880 () | 2875535..2875789 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| IEM32_RS13885 () | 2875786..2876208 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| IEM32_RS13890 () | 2876286..2877074 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| IEM32_RS13895 () | 2877081..2877827 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| IEM32_RS13900 () | 2877850..2878611 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| IEM32_RS13905 () | 2878627..2879049 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| IEM32_RS13910 () | 2879155..2879367 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| IEM32_RS13915 () | 2879400..2879617 | + | 218 | Protein_2710 | DUF4014 family protein | - |
| IEM32_RS13920 () | 2879619..2879882 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| IEM32_RS13925 () | 2879893..2880054 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| IEM32_RS13930 () | 2880133..2880378 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| IEM32_RS13935 () | 2880810..2881961 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| IEM32_RS13940 () | 2881929..2882918 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| IEM32_RS13945 () | 2882918..2884309 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| IEM32_RS13950 () | 2884809..2885408 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| IEM32_RS13955 () | 2885408..2885698 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| IEM32_RS13960 () | 2885695..2886249 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| IEM32_RS13975 () | 2886811..2887242 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| IEM32_RS13980 () | 2887239..2887494 | + | 256 | Protein_2721 | DUF3927 family protein | - |
| IEM32_RS13985 () | 2887817..2889670 | + | 1854 | WP_000143079.1 | SASA family carbohydrate esterase | - |
| IEM32_RS13990 () | 2889820..2890035 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| IEM32_RS13995 () | 2890040..2890384 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| IEM32_RS14000 () | 2890435..2890968 | + | 534 | WP_000992086.1 | lysozyme | - |
| IEM32_RS14005 () | 2891242..2891937 | + | 696 | WP_000661712.1 | phage antirepressor protein | - |
| IEM32_RS14010 () | 2892032..2892163 | + | 132 | WP_001280923.1 | hypothetical protein | - |
| IEM32_RS14015 () | 2892386..2892571 | + | 186 | WP_012817877.1 | Rz1 family lipoprotein | - |
| IEM32_RS14020 () | 2892972..2893298 | + | 327 | WP_000828070.1 | TonB family protein | - |
| IEM32_RS14025 () | 2893430..2893630 | - | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| IEM32_RS14030 () | 2893672..2894037 | + | 366 | WP_000829192.1 | HNH endonuclease | - |
| IEM32_RS14035 () | 2894326..2894889 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| IEM32_RS14040 () | 2894886..2896547 | + | 1662 | WP_001304172.1 | terminase large subunit | - |
| IEM32_RS14045 () | 2896611..2898548 | + | 1938 | WP_000173011.1 | phage major capsid protein | - |
| IEM32_RS14050 () | 2898593..2898814 | + | 222 | WP_001063025.1 | hypothetical protein | - |
| IEM32_RS14055 () | 2898760..2901344 | + | 2585 | Protein_2736 | phage portal protein | - |
| IEM32_RS14060 () | 2901341..2901667 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| IEM32_RS14065 () | 2901677..2902027 | + | 351 | WP_001007911.1 | phage head closure protein | - |
| IEM32_RS14070 () | 2902024..2902470 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| IEM32_RS14075 () | 2902467..2902811 | + | 345 | WP_000133393.1 | DUF3168 domain-containing protein | - |
| IEM32_RS14080 () | 2902880..2903596 | + | 717 | WP_001275479.1 | immunoglobulin domain-containing protein | - |
| IEM32_RS14085 () | 2903602..2903976 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| IEM32_RS14090 () | 2904072..2904281 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| IEM32_RS14095 () | 2904333..2907413 | + | 3081 | WP_000212768.1 | phage tail tape measure protein | - |
| IEM32_RS14100 () | 2907406..2907747 | + | 342 | WP_000807964.1 | phage tail protein | - |
| IEM32_RS14105 () | 2907747..2908445 | + | 699 | WP_001152159.1 | phage minor tail protein L | - |
| IEM32_RS14110 () | 2908456..2909199 | + | 744 | WP_000194763.1 | C40 family peptidase | - |
| IEM32_RS14115 () | 2909145..2909777 | + | 633 | WP_064732755.1 | tail assembly protein | - |
| IEM32_RS14120 () | 2909968..2910495 | - | 528 | WP_000649829.1 | superoxide dismutase family protein | - |
| IEM32_RS14125 () | 2910629..2914126 | + | 3498 | WP_000515042.1 | host specificity protein J | - |
| IEM32_RS14130 () | 2914197..2914796 | + | 600 | WP_001230550.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| IEM32_RS14135 () | 2914861..2916174 | + | 1314 | WP_000268955.1 | phage tail protein | - |
| IEM32_RS14140 () | 2916176..2916445 | + | 270 | WP_001023992.1 | phage tail fiber C-terminal domain-containing protein | - |
| IEM32_RS14145 () | 2916558..2917133 | + | 576 | WP_001131659.1 | DUF1076 domain-containing protein | - |
| IEM32_RS14150 () | 2917206..2917835 | + | 630 | WP_001443810.1 | DUF1076 domain-containing protein | - |
| IEM32_RS14155 () | 2917917..2918558 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| IEM32_RS14160 () | 2919139..2919573 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| IEM32_RS14165 () | 2919714..2920827 | - | 1114 | Protein_2758 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA10219 | NC_002695 | 1921609..1970151 | 0.01 |