MGE detailed information
MGE type: Prophage MGE length: 52713 bp
Accession: NZ_CP062160 Location: 2697681..2750393 Organism: Escherichia coli strain 20R2R Replicon: chromosome
Accession: NZ_CP062160 Location: 2697681..2750393 Organism: Escherichia coli strain 20R2R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEM32_RS12880 () | 2693581..2694801 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| IEM32_RS12885 () | 2694926..2695621 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| IEM32_RS12890 () | 2695574..2696866 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| IEM32_RS12895 () | 2697024..2697638 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| IEM32_RS12900 () | 2697681..2698535 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| IEM32_RS12905 () | 2698537..2699154 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| IEM32_RS12910 () | 2699165..2701588 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| IEM32_RS12915 () | 2701649..2704075 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| IEM32_RS12920 () | 2704274..2704579 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| IEM32_RS12925 () | 2704687..2705397 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| IEM32_RS12930 () | 2705400..2705960 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| IEM32_RS12935 () | 2705995..2706336 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| IEM32_RS12940 () | 2706471..2706797 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| IEM32_RS12945 () | 2707564..2707751 | - | 188 | Protein_2519 | DUF3596 domain-containing protein | - |
| IEM32_RS12950 () | 2707786..2708037 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| IEM32_RS12955 () | 2708110..2710581 | - | 2472 | WP_000048458.1 | exonuclease | - |
| IEM32_RS12960 () | 2710674..2710865 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| IEM32_RS12965 () | 2710862..2711050 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| IEM32_RS12970 () | 2711619..2711837 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| IEM32_RS12975 () | 2711909..2712208 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| IEM32_RS12980 () | 2712561..2712839 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IEM32_RS12985 () | 2712841..2713032 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| IEM32_RS12990 () | 2713053..2713424 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| IEM32_RS12995 () | 2713522..2713824 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| IEM32_RS13000 () | 2713821..2714246 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| IEM32_RS13005 () | 2714269..2715231 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| IEM32_RS13010 () | 2715238..2715978 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| IEM32_RS13015 () | 2716004..2716773 | + | 770 | Protein_2533 | DUF1627 domain-containing protein | - |
| IEM32_RS13020 () | 2716789..2717184 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| IEM32_RS13025 () | 2717241..2717825 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| IEM32_RS13030 () | 2717941..2718045 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| IEM32_RS13035 () | 2718234..2718446 | + | 213 | WP_000887477.1 | type I toxin-antitoxin system Hok family toxin | - |
| IEM32_RS13040 () | 2718614..2718892 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| IEM32_RS13045 () | 2718894..2719943 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| IEM32_RS13050 () | 2719956..2720315 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IEM32_RS13055 () | 2720312..2721001 | + | 690 | WP_001059381.1 | antiterminator | - |
| IEM32_RS13075 () | 2721642..2722070 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| IEM32_RS13080 () | 2722067..2722322 | + | 256 | Protein_2543 | DUF3927 family protein | - |
| IEM32_RS13085 () | 2722549..2724399 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| IEM32_RS13090 () | 2724839..2725054 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| IEM32_RS13095 () | 2725059..2725403 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| IEM32_RS13100 () | 2725454..2725987 | + | 534 | WP_000992137.1 | lysozyme | - |
| IEM32_RS13105 () | 2726258..2726827 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| IEM32_RS13110 () | 2726827..2726973 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| IEM32_RS13115 () | 2727201..2727386 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| IEM32_RS13120 () | 2727811..2728038 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| IEM32_RS13125 () | 2728080..2728445 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| IEM32_RS13130 () | 2728735..2729298 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| IEM32_RS13135 () | 2729295..2730956 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| IEM32_RS13140 () | 2731020..2732957 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| IEM32_RS13145 () | 2733002..2733223 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| IEM32_RS13150 () | 2733169..2735748 | + | 2580 | WP_001304108.1 | phage portal protein | - |
| IEM32_RS13155 () | 2735751..2736077 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| IEM32_RS13160 () | 2736087..2736437 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| IEM32_RS13165 () | 2736434..2736880 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| IEM32_RS13170 () | 2736877..2737221 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| IEM32_RS13175 () | 2737287..2738003 | + | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| IEM32_RS13180 () | 2738018..2738392 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| IEM32_RS13185 () | 2738488..2738697 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| IEM32_RS13190 () | 2738745..2741987 | + | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| IEM32_RS13195 () | 2741980..2742321 | + | 342 | WP_000807954.1 | phage tail protein | - |
| IEM32_RS13200 () | 2742321..2743019 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| IEM32_RS13205 () | 2743030..2743773 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| IEM32_RS13210 () | 2743719..2744351 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| IEM32_RS13215 () | 2744693..2745868 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| IEM32_RS13220 () | 2745820..2748167 | + | 2348 | Protein_2571 | host specificity protein J | - |
| IEM32_RS13225 () | 2748235..2748834 | + | 600 | WP_001230508.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| IEM32_RS13230 () | 2748899..2750122 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| IEM32_RS13235 () | 2750124..2750393 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| IEM32_RS13240 () | 2750507..2751082 | + | 576 | Protein_2575 | DUF1076 domain-containing protein | - |
| IEM32_RS13245 () | 2751793..2752443 | + | 651 | WP_001121225.1 | type III secretion system effector NleG7 | - |
| IEM32_RS13250 () | 2752593..2752988 | + | 396 | Protein_2577 | IS256 family transposase | - |
| IEM32_RS13255 () | 2753026..2754564 | - | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| IEM32_RS13260 () | 2754614..2754961 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| IEM32_RS13265 () | 2754958..2755338 | - | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0.009 |