MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 30711 bp
Accession: NZ_CP061717 Location: 1..30711 Organism: Pediococcus acidilactici strain HN9 Replicon: plasmid pHN9-2
Accession: NZ_CP061717 Location: 1..30711 Organism: Pediococcus acidilactici strain HN9 Replicon: plasmid pHN9-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ID874_RS10140 () | 865..1737 | - | 873 | WP_119463183.1 | ROK family protein | - |
| ID874_RS10145 () | 1937..2911 | + | 975 | WP_119463184.1 | LacI family DNA-binding transcriptional regulator | - |
| ID874_RS10150 () | 3028..4266 | + | 1239 | WP_193223780.1 | MFS transporter | - |
| ID874_RS10155 () | 4275..5690 | + | 1416 | WP_193223781.1 | glycoside hydrolase family 32 protein | - |
| ID874_RS10160 () | 6023..6667 | + | 645 | WP_027822193.1 | ArsR family transcriptional regulator | - |
| ID874_RS10165 () | 6793..7074 | + | 282 | WP_008855846.1 | thioredoxin family protein | - |
| ID874_RS10170 () | 7088..7402 | + | 315 | WP_015474701.1 | thioredoxin | - |
| ID874_RS10175 () | 7423..7746 | + | 324 | WP_193223782.1 | thioredoxin family protein | - |
| ID874_RS10180 () | 7746..7880 | + | 135 | WP_080280589.1 | aspartate/glutamate racemase family protein | - |
| ID874_RS10185 () | 7965..8909 | + | 945 | WP_006844822.1 | thioredoxin-disulfide reductase | - |
| ID874_RS10190 () | 8928..9575 | + | 648 | WP_006844821.1 | DsbA family oxidoreductase | - |
| ID874_RS10195 () | 9737..11068 | + | 1332 | WP_193223783.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| ID874_RS10200 () | 11187..11531 | - | 345 | WP_001748110.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| ID874_RS10205 () | 11525..11788 | - | 264 | WP_001748109.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| ID874_RS10210 () | 11874..12461 | + | 588 | WP_050340451.1 | site-specific integrase | - |
| ID874_RS10215 () | 12817..13029 | + | 213 | WP_193223787.1 | hypothetical protein | - |
| ID874_RS10220 () | 13746..14679 | + | 934 | Protein_17 | replication initiation protein | - |
| ID874_RS10225 () | 14672..15187 | + | 516 | WP_193223786.1 | DUF536 domain-containing protein | - |
| ID874_RS10230 () | 15456..15934 | + | 479 | Protein_19 | IS3 family transposase IS1223 | Transposase |
| ID874_RS10235 () | 15911..16309 | - | 399 | Protein_20 | ROK family protein | - |
| ID874_RS10240 () | 16509..17482 | + | 974 | Protein_21 | LacI family DNA-binding transcriptional regulator | - |
| ID874_RS10245 () | 17599..18837 | + | 1239 | WP_193223780.1 | MFS transporter | - |
| ID874_RS10250 () | 18846..20261 | + | 1416 | WP_193223781.1 | glycoside hydrolase family 32 protein | - |
| ID874_RS10255 () | 20594..21238 | + | 645 | WP_027822193.1 | ArsR family transcriptional regulator | - |
| ID874_RS10260 () | 21364..21645 | + | 282 | WP_008855846.1 | thioredoxin family protein | - |
| ID874_RS10265 () | 21659..21973 | + | 315 | WP_015474701.1 | thioredoxin | - |
| ID874_RS10270 () | 21994..22317 | + | 324 | WP_193223782.1 | thioredoxin family protein | - |
| ID874_RS10275 () | 22317..22451 | + | 135 | WP_080280589.1 | aspartate/glutamate racemase family protein | - |
| ID874_RS10280 () | 22536..23480 | + | 945 | WP_006844822.1 | thioredoxin-disulfide reductase | - |
| ID874_RS10285 () | 23499..24146 | + | 648 | WP_006844821.1 | DsbA family oxidoreductase | - |
| ID874_RS10290 () | 24308..25639 | + | 1332 | WP_193223783.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| ID874_RS10295 () | 25758..26102 | - | 345 | WP_001748110.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| ID874_RS10300 () | 26096..26359 | - | 264 | WP_001748109.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| ID874_RS10305 () | 26445..27032 | + | 588 | WP_050340451.1 | site-specific integrase | - |
| ID874_RS10310 () | 27388..27600 | + | 213 | WP_193223787.1 | hypothetical protein | - |
| ID874_RS10315 () | 28317..29252 | + | 936 | WP_193223784.1 | replication initiation protein | - |
| ID874_RS10320 () | 29245..29790 | + | 546 | WP_193223785.1 | DUF536 domain-containing protein | - |
| ID874_RS10325 () | 30032..30565 | + | 534 | WP_119463181.1 | IS3 family transposase IS1223 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|