MGE detailed information
MGE type: Conjugative plasmid MGE length: 135788 bp
Accession: NZ_CP061338 Location: 1..135788 Organism: Escherichia coli strain M11957 Replicon: plasmid unnamed
Accession: NZ_CP061338 Location: 1..135788 Organism: Escherichia coli strain M11957 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC756_RS23440 () | 1..978 | + | 978 | WP_001414517.1 | RepB family plasmid replication initiator protein | - |
| IC756_RS23445 () | 1263..2003 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| IC756_RS23450 () | 2124..2249 | - | 126 | WP_188926504.1 | transcriptional regulator | - |
| IC756_RS23455 () | 2845..3705 | + | 861 | WP_188926506.1 | Right origin-binding protein | VF |
| IC756_RS23460 () | 3720..3995 | + | 276 | WP_188926508.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| IC756_RS23465 () | 3999..4469 | + | 471 | WP_188926510.1 | hypothetical protein | - |
| IC756_RS23470 () | 4469..4786 | + | 318 | WP_188945709.1 | hypothetical protein | - |
| IC756_RS23475 () | 4788..5261 | + | 474 | WP_188945711.1 | hypothetical protein | - |
| IC756_RS23480 () | 5275..6036 | + | 762 | WP_188945713.1 | TolC family protein | - |
| IC756_RS23485 () | 6066..6515 | + | 450 | WP_188945716.1 | hypothetical protein | - |
| IC756_RS23490 () | 6475..7734 | + | 1260 | WP_188926514.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| IC756_RS23495 () | 7738..8187 | + | 450 | WP_188926515.1 | hypothetical protein | - |
| IC756_RS23500 () | 8190..8483 | + | 294 | WP_188945719.1 | hypothetical protein | - |
| IC756_RS23505 () | 9301..10128 | + | 828 | WP_188945726.1 | ATP-binding cassette domain-containing protein | - |
| IC756_RS23510 () | 10189..10731 | + | 543 | WP_188945728.1 | hypothetical protein | - |
| IC756_RS23515 () | 10797..12038 | + | 1242 | WP_188945731.1 | hypothetical protein | - |
| IC756_RS23520 () | 12218..15211 | + | 2994 | WP_188945733.1 | Ig-like domain repeat protein | - |
| IC756_RS23525 () | 15177..16406 | + | 1230 | WP_188945734.1 | hypothetical protein | - |
| IC756_RS23530 () | 16475..17602 | - | 1128 | Protein_18 | IS66 family transposase ISEc8 | Transposase |
| IC756_RS23535 () | 17652..17999 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| IC756_RS23540 () | 17996..18376 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| IC756_RS23545 () | 18467..19882 | - | 1416 | Protein_21 | NTPase | - |
| IC756_RS23550 () | 19884..20972 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| IC756_RS23555 () | 21551..21769 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| IC756_RS23560 () | 21771..22076 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| IC756_RS23565 () | 22129..22861 | + | 733 | Protein_25 | phage integrase family protein | - |
| IC756_RS23570 () | 23648..24403 | + | 756 | WP_000852143.1 | replication initiation protein RepE | - |
| IC756_RS23575 () | 24991..26157 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| IC756_RS23580 () | 26157..27128 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| IC756_RS23585 () | 28174..28707 | + | 534 | Protein_29 | DUF1281 domain-containing protein | - |
| IC756_RS23590 () | 28711..29016 | + | 306 | Protein_30 | hypothetical protein | - |
| IC756_RS23595 () | 29093..29775 | + | 683 | Protein_31 | DNA methylase | - |
| IC756_RS23600 () | 29776..29997 | + | 222 | WP_001104883.1 | hypothetical protein | - |
| IC756_RS23605 () | 30011..30445 | + | 435 | WP_000274480.1 | DUF1380 family protein | - |
| IC756_RS23610 () | 30496..31275 | + | 780 | WP_053528480.1 | hypothetical protein | - |
| IC756_RS23615 () | 31815..32117 | + | 303 | WP_188926532.1 | antirestriction protein | - |
| IC756_RS23620 () | 32163..32582 | + | 420 | WP_188926521.1 | DUF1380 family protein | - |
| IC756_RS23625 () | 32582..32773 | + | 192 | WP_188926523.1 | hypothetical protein | - |
| IC756_RS23630 () | 32752..33094 | - | 343 | Protein_38 | pilus assembly protein | - |
| IC756_RS23635 () | 33775..34005 | + | 231 | WP_000218647.1 | hypothetical protein | - |
| IC756_RS23640 () | 34057..35418 | + | 1362 | WP_137592140.1 | DUF3560 domain-containing protein | - |
| IC756_RS23645 () | 35465..36028 | + | 564 | WP_012775864.1 | class I SAM-dependent methyltransferase | - |
| IC756_RS23650 () | 35986..36539 | - | 554 | Protein_42 | hypothetical protein | - |
| IC756_RS23655 () | 36840..37379 | + | 540 | WP_032219151.1 | single-stranded DNA-binding protein | - |
| IC756_RS23660 () | 37442..37675 | + | 234 | WP_000005988.1 | DUF905 family protein | - |
| IC756_RS23665 () | 37739..39698 | + | 1960 | Protein_45 | ParB/RepB/Spo0J family partition protein | - |
| IC756_RS23670 () | 39753..40187 | + | 435 | WP_000845926.1 | conjugation system SOS inhibitor PsiB | - |
| IC756_RS23675 () | 40184..40903 | + | 720 | WP_188926525.1 | plasmid SOS inhibition protein A | - |
| - () | 40915..41113 | + | 199 | NuclAT_0 | - | - |
| - () | 40915..41113 | + | 199 | NuclAT_0 | - | - |
| - () | 40915..41113 | + | 199 | NuclAT_0 | - | - |
| - () | 40915..41113 | + | 199 | NuclAT_0 | - | - |
| IC756_RS23680 () | 41178..41336 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| IC756_RS23685 () | 41574..41891 | - | 318 | WP_001356354.1 | hypothetical protein | - |
| IC756_RS23690 () | 42324..42521 | + | 198 | WP_045174704.1 | hypothetical protein | - |
| IC756_RS23695 () | 42640..43461 | + | 822 | WP_188926533.1 | DUF945 domain-containing protein | - |
| IC756_RS23700 () | 43757..44347 | - | 591 | WP_001375132.1 | hypothetical protein | VF |
| IC756_RS23705 () | 44699..45082 | + | 384 | WP_001063020.1 | relaxosome protein TraM | - |
| IC756_RS23710 () | 45274..45921 | + | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| IC756_RS23715 () | 46057..46272 | + | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| IC756_RS23720 () | 46315..46680 | + | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| IC756_RS23725 () | 46695..47006 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IC756_RS23730 () | 47028..47594 | + | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| IC756_RS23735 () | 47605..48309 | + | 705 | WP_148713163.1 | type-F conjugative transfer system secretin TraK | - |
| IC756_RS23740 () | 48309..49736 | + | 1428 | WP_000146676.1 | conjugal transfer protein TraB | - |
| IC756_RS23745 () | 49726..50097 | + | 372 | Protein_61 | conjugal transfer protein TraP | - |
| IC756_RS23750 () | 50134..50436 | + | 303 | Protein_62 | IS3 family transposase ISEc31 | Transposase |
| IC756_RS23755 () | 50504..51655 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| IC756_RS23760 () | 51665..52570 | + | 906 | Protein_64 | IS3 family transposase ISEc31 | Transposase |
| IC756_RS23765 () | 52594..52800 | + | 207 | WP_075051332.1 | traP family protein | - |
| IC756_RS23770 () | 52754..52984 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| IC756_RS23775 () | 52996..53247 | + | 252 | WP_188926526.1 | conjugal transfer protein TrbG | - |
| IC756_RS23780 () | 53244..53759 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IC756_RS23785 () | 53894..54115 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| IC756_RS23790 () | 54275..56902 | + | 2628 | WP_188926528.1 | type IV secretion system protein TraC | - |
| IC756_RS23795 () | 56899..57285 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| IC756_RS23800 () | 57282..57914 | + | 633 | WP_001203717.1 | type-F conjugative transfer system protein TraW | - |
| IC756_RS23805 () | 57911..58903 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| IC756_RS23810 () | 58912..59550 | + | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IC756_RS23815 () | 59547..61355 | + | 1809 | WP_000821838.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IC756_RS23820 () | 61382..61639 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| IC756_RS23825 () | 61632..62375 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IC756_RS23830 () | 62391..62738 | + | 348 | WP_032185993.1 | conjugal transfer protein TrbA | - |
| IC756_RS23835 () | 62818..63054 | - | 237 | WP_001352846.1 | hypothetical protein | - |
| IC756_RS23840 () | 63135..63419 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IC756_RS23845 () | 63406..63951 | + | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IC756_RS23850 () | 63881..64228 | + | 348 | WP_188926530.1 | P-type conjugative transfer protein TrbJ | - |
| IC756_RS23855 () | 64176..64590 | + | 415 | Protein_83 | F-type conjugal transfer protein TrbF | - |
| IC756_RS23860 () | 64590..65963 | + | 1374 | WP_170816519.1 | conjugal transfer protein TraH | - |
| IC756_RS23865 () | 65960..68776 | + | 2817 | WP_188926459.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IC756_RS23870 () | 68809..69330 | + | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| IC756_RS23875 () | 69355..70086 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| IC756_RS23880 () | 70339..72546 | + | 2208 | WP_188926461.1 | type IV conjugative transfer system coupling protein TraD | - |
| IC756_RS23885 () | 72555..72953 | - | 399 | WP_000911315.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IC756_RS23890 () | 72953..73180 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| IC756_RS23895 () | 73262..78532 | + | 5271 | WP_188926463.1 | Multifunctional conjugation protein TraI | Relaxase |
| IC756_RS23900 () | 78552..79292 | + | 741 | WP_188926465.1 | conjugal transfer pilus acetylase TraX | - |
| IC756_RS23905 () | 79351..80210 | + | 860 | Protein_93 | alpha/beta hydrolase | - |
| IC756_RS23910 () | 80313..80873 | + | 561 | WP_032219136.1 | fertility inhibition protein FinO | - |
| IC756_RS23915 () | 81002..81217 | + | 216 | WP_032219135.1 | hypothetical protein | - |
| IC756_RS23920 () | 81937..82371 | + | 435 | WP_188926466.1 | IS66 family transposase ISEc43 | Transposase |
| IC756_RS23925 () | 82368..82718 | + | 351 | WP_188926468.1 | IS66 family transposase IS682 | Transposase |
| IC756_RS23930 () | 82749..84337 | + | 1589 | Protein_98 | IS66 family transposase ISEc23 | Transposase |
| IC756_RS23935 () | 84830..86053 | + | 1224 | WP_062858062.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| IC756_RS23940 () | 86073..86621 | + | 549 | WP_188926476.1 | AIDA repeat-containing protein | - |
| IC756_RS23945 () | 86785..86967 | + | 183 | Protein_101 | prepilin peptidase | - |
| IC756_RS23950 () | 87033..87443 | + | 411 | WP_188926478.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| IC756_RS23955 () | 87461..88420 | + | 960 | WP_188926480.1 | Type II secretion system protein C | VF |
| IC756_RS23960 () | 88450..90510 | + | 2061 | WP_000498817.1 | Type II secretion system protein D | VF |
| IC756_RS23965 () | 90510..92003 | + | 1494 | WP_188926482.1 | Type II secretion system protein E | VF |
| IC756_RS23970 () | 92003..93226 | + | 1224 | WP_001173433.1 | Type II secretion system protein F | VF |
| IC756_RS23975 () | 93243..93698 | + | 456 | WP_188926484.1 | Type II secretion system protein G | VF |
| IC756_RS23980 () | 93702..94265 | + | 564 | WP_188926486.1 | Type II secretion system protein H | VF |
| IC756_RS23985 () | 94262..94633 | + | 372 | WP_188926488.1 | Type II secretion system protein I | VF |
| IC756_RS23990 () | 94630..95235 | + | 606 | WP_001514540.1 | Type II secretion system protein J | VF |
| IC756_RS23995 () | 95232..96209 | + | 978 | WP_000633221.1 | Putative type II secretion system protein K | VF |
| IC756_RS24000 () | 96206..97399 | + | 1194 | WP_188926490.1 | Type II secretion system protein L | VF |
| IC756_RS24005 () | 97386..97922 | + | 537 | WP_188926492.1 | Type II secretion system protein M | VF |
| IC756_RS24010 () | 97959..98181 | - | 223 | Protein_114 | IS3 family transposase | - |
| IC756_RS24015 () | 98337..99071 | + | 735 | WP_188926494.1 | Heat-labile enterotoxin IIB, A chain | VF |
| IC756_RS24020 () | 99074..99442 | + | 369 | WP_188926496.1 | Heat-labile enterotoxin IIA, B chain | - |
| IC756_RS24025 () | 99699..100241 | - | 543 | Protein_117 | Tn3 family transposase | - |
| IC756_RS24030 () | 100280..101513 | - | 1234 | Protein_118 | IS66 family transposase ISKpn24 | Transposase |
| IC756_RS24035 () | 101577..101831 | + | 255 | Protein_119 | IS3 family transposase ISKpn38 | Transposase |
| IC756_RS24040 () | 101932..102179 | + | 248 | Protein_120 | ATP-binding protein | - |
| IC756_RS24045 () | 102405..102620 | + | 216 | WP_062858042.1 | hypothetical protein | - |
| IC756_RS24050 () | 103022..104159 | - | 1138 | Protein_122 | IS3 family transposase IS3F | Transposase |
| IC756_RS24055 () | 104386..105738 | + | 1353 | WP_062858040.1 | esterase-like activity of phytase family protein | - |
| IC756_RS24060 () | 105912..106418 | - | 507 | WP_062858039.1 | thiol peroxidase | - |
| IC756_RS24065 () | 107451..108938 | + | 1488 | WP_188926535.1 | PhoPQ-regulated protein | - |
| IC756_RS24070 () | 109702..109965 | + | 264 | WP_062858037.1 | hypothetical protein | - |
| IC756_RS24075 () | 109955..110254 | + | 300 | Protein_127 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IC756_RS24080 () | 110782..111387 | - | 606 | WP_062858035.1 | proQ/FINO family protein | - |
| IC756_RS24085 () | 111827..112059 | + | 233 | Protein_129 | hypothetical protein | - |
| IC756_RS24090 () | 112267..112445 | + | 179 | Protein_130 | conjugal transfer protein | - |
| IC756_RS24095 () | 112504..113361 | + | 858 | WP_188926498.1 | putative protein YcjY | VF |
| IC756_RS24100 () | 113454..113929 | - | 476 | Protein_132 | IS256 family transposase IS1414 | Transposase |
| IC756_RS24105 () | 114193..114395 | - | 203 | Protein_133 | IS91 family transposase | - |
| IC756_RS24110 () | 114448..114876 | - | 429 | Protein_134 | IS3 family transposase IS2 | Transposase |
| IC756_RS24115 () | 115074..116030 | + | 957 | WP_188926500.1 | Ferri-bacillibactin esterase BesA | VF |
| IC756_RS24120 () | 116075..116768 | - | 694 | Protein_136 | TonB-dependent receptor | - |
| IC756_RS24125 () | 117612..117922 | + | 311 | Protein_137 | hypothetical protein | - |
| IC756_RS24130 () | 118535..120190 | + | 1656 | WP_062858027.1 | L-lactate permease | - |
| IC756_RS24135 () | 120190..120966 | + | 777 | WP_188926502.1 | transcriptional regulator LldR | - |
| IC756_RS24140 () | 120963..122112 | + | 1150 | Protein_140 | quinone-dependent L-lactate dehydrogenase | - |
| IC756_RS24145 () | 123198..124103 | - | 906 | Protein_141 | IS3 family transposase ISEc31 | Transposase |
| IC756_RS24150 () | 124168..125319 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| IC756_RS24155 () | 125329..125736 | + | 408 | Protein_143 | IS3 family transposase | - |
| IC756_RS24165 () | 127047..127546 | + | 500 | Protein_145 | IS3 family transposase ISCfr6 | Transposase |
| IC756_RS24170 () | 128433..128927 | + | 495 | WP_188945707.1 | Transcriptional repressor MprA | VF |
| IC756_RS24175 () | 129178..129348 | + | 171 | Protein_147 | IS3 family transposase IS911 | Transposase |
| IC756_RS24180 () | 129349..129564 | - | 216 | Protein_148 | IS3 family transposase IS911 | Transposase |
| IC756_RS24185 () | 129707..130218 | + | 512 | Protein_149 | IS3 family transposase | - |
| IC756_RS24190 () | 130500..130883 | + | 384 | Protein_150 | IS110 family transposase ISEc21 | Transposase |
| IC756_RS24195 () | 130937..132150 | + | 1214 | WP_171876673.1 | IS3 family transposase IS629 | Transposase |
| IC756_RS24200 () | 132194..132309 | + | 116 | Protein_152 | IS110 family transposase ISEc21 | Transposase |
| IC756_RS24205 () | 132494..132796 | + | 303 | Protein_153 | IS3 family transposase ISEc31 | Transposase |
| IC756_RS24210 () | 132809..133960 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| IC756_RS24215 () | 134025..134204 | - | 180 | Protein_155 | IS3 family transposase | - |
| IC756_RS24220 () | 134327..134578 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| IC756_RS24225 () | 134575..134862 | + | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IC756_RS24230 () | 134861..135109 | + | 249 | Protein_158 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|