MGE detailed information
MGE type: Genomic_island MGE length: 34967 bp
Accession: NZ_CP061208 Location: 1002451..1037417 Organism: Streptococcus pneumoniae strain D39_P0 Replicon: chromosome
Accession: NZ_CP061208 Location: 1002451..1037417 Organism: Streptococcus pneumoniae strain D39_P0 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D39N_RS04895 (D39N_00988) | 999440..1000669 | - | 1230 | WP_000703358.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| D39N_RS04900 | 1000813..1001123 | - | 311 | Protein_986 | transposase family protein | - |
| D39N_RS04905 (D39N_00989) | 1001571..1001792 | - | 222 | WP_000286251.1 | helix-turn-helix transcriptional regulator | - |
| D39N_RS04910 (D39N_00990) | 1002451..1003662 | - | 1212 | WP_000687010.1 | MFS transporter | - |
| D39N_RS04915 (D39N_00991) | 1004045..1004689 | - | 645 | WP_000270072.1 | Putative acetyltransferase EpsM | VF |
| D39N_RS04920 (D39N_00992) | 1004708..1005907 | - | 1200 | WP_000238677.1 | ATP-grasp domain-containing protein | - |
| D39N_RS04925 (D39N_00993) | 1005922..1006872 | - | 951 | WP_000389975.1 | hypothetical protein | - |
| D39N_RS04930 (D39N_00994) | 1006862..1008085 | - | 1224 | WP_000252068.1 | ATP phosphoribosyltransferase regulatory subunit | - |
| D39N_RS04935 (D39N_00995) | 1008087..1009382 | - | 1296 | WP_000609550.1 | AMP-binding protein | - |
| D39N_RS04940 (D39N_00996) | 1009405..1010511 | - | 1107 | WP_000444113.1 | hypothetical protein | - |
| D39N_RS04945 (D39N_00997) | 1010540..1012432 | - | 1893 | WP_000710678.1 | hypothetical protein | - |
| D39N_RS04950 (D39N_00998) | 1012455..1013237 | - | 783 | WP_000809423.1 | sugar phosphate isomerase/epimerase | - |
| D39N_RS04955 (D39N_00999) | 1013247..1013855 | - | 609 | WP_000709470.1 | PIG-L family deacetylase | - |
| D39N_RS04960 (D39N_01000) | 1013857..1015152 | - | 1296 | WP_000794307.1 | nucleotide sugar dehydrogenase | - |
| D39N_RS04965 | 1015252..1015323 | - | 72 | WP_001809668.1 | peptide pheromone SHP3 | - |
| D39N_RS04970 (D39N_01001) | 1015404..1016258 | + | 855 | WP_000837499.1 | XRE/MutR family transcriptional regulator | - |
| D39N_RS04975 | 1016303..1018188 | - | 1886 | Protein_1001 | SAG1250 family conjugative relaxase | - |
| D39N_RS04980 (D39N_01005) | 1018211..1018540 | - | 330 | WP_000263037.1 | plasmid mobilization relaxosome protein MobC | - |
| D39N_RS04985 (D39N_01006) | 1018550..1018909 | - | 360 | WP_000529543.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| D39N_RS10555 (D39N_01007) | 1019741..1020118 | - | 378 | WP_249336495.1 | ATP-binding protein | - |
| D39N_RS04990 (D39N_01008) | 1020121..1020897 | - | 777 | WP_001821017.1 | hypothetical protein | - |
| D39N_RS04995 (D39N_01009) | 1020925..1021686 | - | 762 | WP_000405357.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| D39N_RS05000 (D39N_01010) | 1021686..1022162 | - | 477 | WP_000579612.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| D39N_RS10560 | 1022607..1023062 | - | 456 | Protein_1008 | hypothetical protein | - |
| D39N_RS05015 (D39N_01013) | 1023337..1025076 | - | 1740 | WP_000423451.1 | glycoside hydrolase family 13 protein | - |
| D39N_RS05020 (D39N_01014) | 1025239..1026123 | - | 885 | WP_000710119.1 | diacylglycerol kinase family lipid kinase | - |
| D39N_RS05025 (D39N_01015) | 1026235..1027089 | - | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| D39N_RS05030 (D39N_01016) | 1027089..1027904 | - | 816 | WP_000262006.1 | ATP-grasp domain-containing protein | - |
| D39N_RS05035 (D39N_01017) | 1027966..1028154 | - | 189 | WP_000179769.1 | hypothetical protein | - |
| D39N_RS05040 (D39N_01018) | 1028476..1029042 | - | 567 | WP_000234985.1 | hypothetical protein | - |
| D39N_RS05045 (D39N_01019) | 1029310..1030989 | - | 1680 | WP_000031832.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| D39N_RS05050 (D39N_01020) | 1031081..1031242 | - | 162 | WP_000368174.1 | hypothetical protein | - |
| D39N_RS05055 | 1031926..1032225 | - | 300 | Protein_1017 | hypothetical protein | - |
| D39N_RS05060 | 1032206..1032529 | - | 324 | WP_229294054.1 | restriction endonuclease subunit S | - |
| D39N_RS10565 | 1032648..1032818 | - | 171 | Protein_1019 | IS3 family transposase | - |
| D39N_RS05065 (D39N_01022) | 1032983..1033777 | - | 795 | WP_000677519.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| D39N_RS05070 (D39N_01023) | 1033777..1034784 | - | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| D39N_RS05075 (D39N_01024) | 1034784..1035791 | - | 1008 | WP_001244692.1 | Ferric enterobactin transport system permease protein FepD | VF |
| D39N_RS05080 (D39N_01025) | 1035781..1036806 | - | 1026 | WP_000790743.1 | ABC transporter substrate-binding protein | - |
| D39N_RS05085 (D39N_01026) | 1037199..1037417 | - | 219 | WP_000885335.1 | helix-turn-helix transcriptional regulator | - |
| D39N_RS05090 | 1037663..1037941 | - | 279 | WP_000710803.1 | hypothetical protein | - |
| D39N_RS05095 (D39N_01027) | 1038155..1039786 | - | 1632 | WP_000914581.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| D39N_RS05100 (D39N_01028) | 1039860..1040834 | - | 975 | WP_001227739.1 | DUF1002 domain-containing protein | - |
| D39N_RS05105 (D39N_01029) | 1040908..1041522 | - | 615 | WP_000476388.1 | cell wall hydrolase Pmp23 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus pneumoniae R6 | Genomic island | TA6282 | NC_003098 | 920239..953000 | 0.001 |