MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 60870 bp
Accession: NZ_CP061128 Location: 1..60870 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S304 Replicon: plasmid pS304_2
Accession: NZ_CP061128 Location: 1..60870 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S304 Replicon: plasmid pS304_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IBY93_RS25385 () | 1..1029 | + | 1029 | WP_001175215.1 | replication initiation protein | - |
| IBY93_RS25390 () | 2628..2789 | + | 162 | WP_001366886.1 | type I toxin-antitoxin system Hok family toxin | - |
| IBY93_RS25395 () | 2939..3535 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| IBY93_RS25400 () | 3553..3837 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| IBY93_RS25405 () | 3911..4576 | - | 666 | WP_000532149.1 | P-loop NTPase | - |
| IBY93_RS25410 () | 5165..5494 | + | 330 | WP_001542022.1 | hypothetical protein | - |
| IBY93_RS25415 () | 5895..6410 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| IBY93_RS25420 () | 6514..7056 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| IBY93_RS25425 () | 7053..7307 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| IBY93_RS25430 () | 7304..7546 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| IBY93_RS25435 () | 8117..8410 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| IBY93_RS25440 () | 8899..9147 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| IBY93_RS25445 () | 9144..9491 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| IBY93_RS25450 () | 9579..9761 | - | 183 | WP_001428470.1 | hypothetical protein | - |
| IBY93_RS25455 () | 10263..10562 | + | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| IBY93_RS25460 () | 10822..11148 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| IBY93_RS25465 () | 11150..11509 | - | 360 | WP_196315155.1 | hypothetical protein | - |
| IBY93_RS25470 () | 11610..12317 | - | 708 | WP_000108794.1 | hypothetical protein | - |
| IBY93_RS25475 () | 12319..13071 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| IBY93_RS25480 () | 13089..13490 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| IBY93_RS25485 () | 13858..14199 | + | 342 | WP_000730722.1 | plasmid mobilization relaxosome protein MobC | - |
| IBY93_RS25490 () | 14196..18419 | + | 4224 | WP_196315154.1 | relaxase | - |
| IBY93_RS25495 () | 18640..20265 | + | 1626 | WP_049589868.1 | phosphoethanolamine--lipid A transferase MCR-1.1 | - |
| IBY93_RS25500 () | 20337..21110 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| IBY93_RS25505 () | 21069..21509 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| IBY93_RS25510 () | 21855..22061 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| IBY93_RS25515 () | 22130..24295 | - | 2166 | WP_034169408.1 | type IA DNA topoisomerase | - |
| IBY93_RS25520 () | 24300..24875 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| IBY93_RS25525 () | 25045..26721 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| IBY93_RS25530 () | 26816..27331 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| IBY93_RS25535 () | 27378..28031 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| IBY93_RS25540 () | 28043..29167 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| IBY93_RS25545 () | 30587..30796 | + | 210 | WP_001444223.1 | hypothetical protein | - |
| IBY93_RS25550 () | 30793..32169 | - | 1377 | WP_000750519.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| IBY93_RS25555 () | 32182..32817 | - | 636 | WP_000934977.1 | A24 family peptidase | - |
| IBY93_RS25560 () | 32821..33303 | - | 483 | WP_001258095.1 | lytic transglycosylase domain-containing protein | - |
| IBY93_RS25565 () | 33369..33932 | - | 564 | WP_034169414.1 | hypothetical protein | - |
| IBY93_RS25570 () | 33982..35091 | - | 1110 | WP_000974903.1 | type II secretion system F family protein | - |
| IBY93_RS25575 () | 35082..36620 | - | 1539 | WP_000466225.1 | Flp pilus assembly complex ATPase component TadA | - |
| IBY93_RS25580 () | 36645..37139 | - | 495 | WP_000912553.1 | type IV pilus biogenesis protein PilP | - |
| IBY93_RS25585 () | 37123..38445 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| IBY93_RS25590 () | 38484..40127 | - | 1644 | WP_001035592.1 | PilN family type IVB pilus formation outer membrane protein | - |
| IBY93_RS25595 () | 40120..40656 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| IBY93_RS25600 () | 40703..42661 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| IBY93_RS25605 () | 42677..43732 | - | 1056 | WP_001542006.1 | P-type DNA transfer ATPase VirB11 | - |
| IBY93_RS25610 () | 43751..44890 | - | 1140 | WP_034169415.1 | TrbI/VirB10 family protein | - |
| IBY93_RS25615 () | 44880..45581 | - | 702 | WP_000274524.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| IBY93_RS25620 () | 45647..46381 | - | 735 | WP_000432282.1 | type IV secretion system protein | - |
| IBY93_RS25625 () | 46381..46515 | - | 135 | WP_000701233.1 | hypothetical protein | - |
| IBY93_RS25630 () | 46547..48904 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| IBY93_RS25635 () | 48910..49230 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| IBY93_RS25640 () | 49301..49489 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| IBY93_RS25645 () | 49591..50175 | - | 585 | WP_001177117.1 | lytic transglycosylase domain-containing protein | - |
| IBY93_RS25650 () | 50196..50594 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| IBY93_RS25655 () | 50713..51150 | - | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| IBY93_RS25660 () | 51156..52391 | - | 1236 | WP_034169417.1 | toxin co-regulated pilus biosynthesis Q family protein | - |
| IBY93_RS25665 () | 52394..52693 | - | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| IBY93_RS25670 () | 52741..53550 | + | 810 | WP_024237698.1 | hypothetical protein | - |
| IBY93_RS25675 () | 53773..53997 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| IBY93_RS25680 () | 54006..54650 | - | 645 | WP_001310442.1 | conjugal transfer protein TrbJ | - |
| IBY93_RS25685 () | 54656..55651 | - | 996 | WP_001028540.1 | type IV secretion system protein | - |
| IBY93_RS25690 () | 55655..55912 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| IBY93_RS25695 () | 55909..56211 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| IBY93_RS25700 () | 56192..56449 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| IBY93_RS25705 () | 56482..56928 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| IBY93_RS25710 () | 56939..57109 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| IBY93_RS25715 () | 57113..57556 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| IBY93_RS25720 () | 57930..58883 | - | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| IBY93_RS25725 () | 58910..59086 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| IBY93_RS25730 () | 59079..59294 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| IBY93_RS25735 () | 59287..59793 | - | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|