MGE detailed information
MGE type: Conjugative plasmid MGE length: 141542 bp
Accession: NZ_CP060988 Location: 1..141542 Organism: Escherichia coli strain EC31 Replicon: plasmid pEC31-2
Accession: NZ_CP060988 Location: 1..141542 Organism: Escherichia coli strain EC31 Replicon: plasmid pEC31-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9212_RS24230 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| H9212_RS24235 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| H9212_RS24240 (2124) | 2124..2312 | - | 189 | WP_014640565.1 | hypothetical protein | - |
| H9212_RS24245 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| H9212_RS24250 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| H9212_RS24255 (5199) | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| H9212_RS24260 (7449) | 7449..7628 | - | 180 | Protein_6 | integrase core domain-containing protein | - |
| H9212_RS24265 (7767) | 7767..8057 | + | 291 | Protein_7 | IS3 family transposase IS1203 | Transposase |
| H9212_RS24270 (8125) | 8125..8822 | + | 698 | WP_103215986.1 | IS1 family transposase IS1G | Transposase |
| H9212_RS24275 (8840) | 8840..9103 | + | 264 | Protein_9 | lipid II-degrading bacteriocin colicin M | - |
| H9212_RS24280 (9153) | 9153..9506 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| H9212_RS24285 (9684) | 9684..10475 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| H9212_RS24290 (10472) | 10472..11161 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| H9212_RS24295 (11205) | 11205..11555 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| H9212_RS24300 (11951) | 11951..13024 | + | 1074 | WP_077890912.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| H9212_RS24305 (13317) | 13317..14231 | + | 915 | WP_052686739.1 | Abi family protein | - |
| H9212_RS24310 (14486) | 14486..14716 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| H9212_RS24315 (14713) | 14713..15129 | + | 417 | WP_044864680.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H9212_RS24320 (15338) | 15338..16318 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| H9212_RS24325 (16519) | 16519..19584 | - | 3066 | WP_000002334.1 | tetrathionate reductase subunit TtrA | - |
| H9212_RS24330 (19577) | 19577..20599 | - | 1023 | WP_044864557.1 | tetrathionate reductase subunit TtrC | - |
| H9212_RS24335 (20600) | 20600..21352 | - | 753 | WP_077910396.1 | tetrathionate reductase subunit TtrB | - |
| H9212_RS24340 (21562) | 21562..23295 | + | 1734 | WP_080950116.1 | Tetrathionate sensor histidine kinase TtrS | VF |
| H9212_RS24345 (23270) | 23270..23854 | + | 585 | WP_000974596.1 | Tetrathionate response regulatory protein TtrR | VF |
| H9212_RS24350 (23947) | 23947..24150 | + | 204 | WP_000528119.1 | fumarate hydratase FumD | - |
| H9212_RS24355 (24259) | 24259..24975 | - | 717 | Protein_25 | IS5 family transposase IS5D | Transposase |
| H9212_RS24360 (25164) | 25164..26741 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| H9212_RS24365 (26853) | 26853..27557 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9212_RS24370 (27563) | 27563..27703 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| H9212_RS24375 (28189) | 28189..28926 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| H9212_RS24380 (28923) | 28923..29147 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| H9212_RS24385 (29358) | 29358..30851 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| H9212_RS24390 (30882) | 30882..31766 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| H9212_RS24395 (31983) | 31983..33197 | + | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| H9212_RS24400 (33225) | 33225..33530 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| H9212_RS24405 (33642) | 33642..33830 | + | 189 | Protein_35 | IS91 family transposase | - |
| H9212_RS24410 (33797) | 33797..34996 | - | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| H9212_RS24415 (35102) | 35102..35728 | + | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| H9212_RS24420 (35760) | 35760..35996 | - | 237 | WP_042005022.1 | hypothetical protein | - |
| H9212_RS24425 (36050) | 36050..36886 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| H9212_RS24430 (36886) | 36886..37689 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| H9212_RS24435 (37750) | 37750..38565 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| H9212_RS24440 (38873) | 38873..39049 | - | 177 | Protein_42 | replication protein C, IncQ-type | - |
| H9212_RS24445 (39110) | 39110..39814 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9212_RS24450 (39936) | 39936..40841 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| H9212_RS24455 (40838) | 40838..42076 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| H9212_RS24460 (42076) | 42076..42660 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| H9212_RS24465 (43153) | 43153..43917 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| H9212_RS24470 (44035) | 44035..44100 | - | 66 | Protein_48 | EAL domain-containing protein | - |
| H9212_RS24475 (44144) | 44144..44449 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| H9212_RS24480 (44460) | 44460..45665 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| H9212_RS24485 (45993) | 45993..46538 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| H9212_RS24490 (46675) | 46675..47247 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| H9212_RS24495 (47284) | 47284..48675 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| H9212_RS24500 (48708) | 48708..49136 | + | 429 | Protein_54 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| H9212_RS24505 (49455) | 49455..50111 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| H9212_RS24510 (50506) | 50506..51122 | + | 617 | Protein_56 | transposase | - |
| H9212_RS24515 (51189) | 51189..51893 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9212_RS24520 (51839) | 51839..52951 | - | 1113 | WP_024166810.1 | IS91 family transposase ISAzo26 | Transposase |
| H9212_RS24525 (53107) | 53107..53580 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| H9212_RS24530 (53827) | 53827..54531 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9212_RS24535 (54597) | 54597..55115 | + | 519 | WP_014839979.1 | FidL-like protein | - |
| H9212_RS24540 (55120) | 55120..55536 | - | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| H9212_RS24545 (55922) | 55922..56626 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9212_RS24550 (56679) | 56679..57155 | + | 477 | Protein_64 | PAS domain-containing protein | - |
| H9212_RS24555 (57223) | 57223..58320 | - | 1098 | Protein_65 | TonB-dependent receptor | - |
| H9212_RS24560 (58377) | 58377..59345 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| H9212_RS24565 (59380) | 59380..60255 | - | 876 | WP_241407884.1 | Beta-lactamase Toho-1 | ARG |
| H9212_RS24570 (60505) | 60505..60696 | - | 192 | Protein_68 | IS1380 family transposase | - |
| H9212_RS24575 (60766) | 60766..61470 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9212_RS24580 (61536) | 61536..62081 | + | 546 | Protein_70 | Tn3 family transposase TnpA_Tn3 | Transposase |
| H9212_RS24585 (62117) | 62117..62532 | - | 416 | Protein_71 | IS1-like element IS1B family transposase | - |
| H9212_RS24590 (62781) | 62781..63182 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| H9212_RS24595 (63115) | 63115..63372 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| H9212_RS24600 (63465) | 63465..64118 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| H9212_RS24605 (65057) | 65057..65914 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| H9212_RS24610 (65907) | 65907..65981 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| H9212_RS24615 (66216) | 66216..66476 | - | 261 | WP_000078108.1 | replication regulatory protein RepA | - |
| H9212_RS24620 (66716) | 66716..66840 | - | 125 | Protein_78 | hypothetical protein | - |
| H9212_RS24625 (67418) | 67418..70273 | - | 2856 | WP_053320759.1 | chromosome segregation protein SMC | - |
| H9212_RS24630 (70338) | 70338..72371 | - | 2034 | WP_000887497.1 | N-6 DNA methylase | - |
| H9212_RS24635 (72417) | 72417..74966 | - | 2550 | WP_053320758.1 | DEAD/DEAH box helicase family protein | - |
| H9212_RS24640 (74969) | 74969..75157 | - | 189 | WP_001137617.1 | hypothetical protein | - |
| H9212_RS24645 (75252) | 75252..75464 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| H9212_RS24650 (75600) | 75600..76160 | - | 561 | WP_024184455.1 | fertility inhibition protein FinO | - |
| H9212_RS24655 (76215) | 76215..76958 | - | 744 | WP_000205704.1 | conjugal transfer pilus acetylase TraX | - |
| H9212_RS24660 (76978) | 76978..82248 | - | 5271 | WP_053320757.1 | Multifunctional conjugation protein TraI | Relaxase |
| H9212_RS24665 (82248) | 82248..84473 | - | 2226 | WP_100620352.1 | type IV conjugative transfer system coupling protein TraD | - |
| H9212_RS24670 (84726) | 84726..85457 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| H9212_RS24675 (85489) | 85489..85992 | - | 504 | WP_053320762.1 | surface exclusion protein | - |
| H9212_RS24680 (86007) | 86007..88829 | - | 2823 | WP_053320755.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| H9212_RS24685 (88826) | 88826..90199 | - | 1374 | WP_065800514.1 | conjugal transfer pilus assembly protein TraH | - |
| H9212_RS24690 (90199) | 90199..90561 | - | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| H9212_RS24695 (90491) | 90491..91036 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| H9212_RS24700 (91023) | 91023..91259 | - | 237 | WP_001346259.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| H9212_RS24705 (91420) | 91420..92163 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| H9212_RS24710 (92156) | 92156..92416 | - | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| H9212_RS24715 (92443) | 92443..94251 | - | 1809 | WP_000821845.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| H9212_RS24720 (94248) | 94248..94886 | - | 639 | WP_000777691.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| H9212_RS24725 (94895) | 94895..95887 | - | 993 | WP_053320745.1 | conjugal transfer pilus assembly protein TraU | - |
| H9212_RS24730 (95884) | 95884..96516 | - | 633 | WP_001749440.1 | type-F conjugative transfer system protein TraW | - |
| H9212_RS24735 (96513) | 96513..96899 | - | 387 | WP_000099687.1 | type-F conjugative transfer system protein TrbI | - |
| H9212_RS24740 (96896) | 96896..99523 | - | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| H9212_RS24745 (99683) | 99683..99904 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| H9212_RS24750 (100039) | 100039..100554 | - | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| H9212_RS24755 (100551) | 100551..100871 | - | 321 | WP_001057285.1 | conjugal transfer protein TrbD | - |
| H9212_RS24760 (100858) | 100858..101445 | - | 588 | WP_053320746.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| H9212_RS24765 (101435) | 101435..102862 | - | 1428 | WP_000146672.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| H9212_RS24770 (102862) | 102862..103590 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| H9212_RS24775 (103577) | 103577..104143 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| H9212_RS24780 (104165) | 104165..104476 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| H9212_RS24785 (104481) | 104481..104843 | - | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| H9212_RS24790 (104876) | 104876..105277 | - | 402 | WP_223349250.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| H9212_RS24795 (105370) | 105370..106059 | - | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| H9212_RS24800 (106246) | 106246..106629 | - | 384 | WP_053320747.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| H9212_RS24805 (106950) | 106950..107552 | + | 603 | WP_000243709.1 | hypothetical protein | VF |
| H9212_RS24810 (107849) | 107849..108670 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| H9212_RS24815 (108962) | 108962..110158 | + | 1197 | WP_039023277.1 | IS110 family transposase ISEc20 | Transposase |
| H9212_RS24820 (110242) | 110242..110529 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| H9212_RS24825 (110554) | 110554..110760 | - | 207 | WP_000547939.1 | hypothetical protein | - |
| H9212_RS24830 (110830) | 110830..111003 | + | 174 | Protein_120 | hypothetical protein | - |
| H9212_RS24835 (111001) | 111001..111231 | - | 231 | WP_071587244.1 | hypothetical protein | - |
| H9212_RS24840 (111451) | 111451..111576 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| H9212_RS24845 (111518) | 111518..111667 | - | 150 | Protein_123 | plasmid maintenance protein Mok | - |
| - (111653) | 111653..111774 | - | 122 | NuclAT_0 | - | - |
| - (111653) | 111653..111774 | - | 122 | NuclAT_0 | - | - |
| - (111653) | 111653..111774 | - | 122 | NuclAT_0 | - | - |
| - (111653) | 111653..111774 | - | 122 | NuclAT_0 | - | - |
| H9212_RS24850 (111860) | 111860..112606 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| H9212_RS24855 (112621) | 112621..114162 | - | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| - (114355) | 114355..114463 | - | 109 | NuclAT_1 | - | - |
| - (114355) | 114355..114463 | - | 109 | NuclAT_1 | - | - |
| - (114355) | 114355..114463 | - | 109 | NuclAT_1 | - | - |
| - (114355) | 114355..114463 | - | 109 | NuclAT_1 | - | - |
| H9212_RS24860 (114432) | 114432..115194 | - | 763 | Protein_126 | plasmid SOS inhibition protein A | - |
| H9212_RS24865 (115191) | 115191..115625 | - | 435 | WP_000845934.1 | conjugation system SOS inhibitor PsiB | - |
| H9212_RS24870 (115680) | 115680..117638 | - | 1959 | WP_023148339.1 | ParB/RepB/Spo0J family partition protein | - |
| H9212_RS24875 (117704) | 117704..117937 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| H9212_RS24880 (118000) | 118000..118539 | - | 540 | WP_000290791.1 | single-stranded DNA-binding protein | - |
| H9212_RS24885 (119012) | 119012..119266 | - | 255 | WP_072254791.1 | hypothetical protein | - |
| H9212_RS24890 (119182) | 119182..119418 | - | 237 | WP_001495900.1 | hypothetical protein | - |
| H9212_RS24895 (119418) | 119418..119981 | - | 564 | WP_001299724.1 | class I SAM-dependent methyltransferase | - |
| H9212_RS24900 (120030) | 120030..121391 | - | 1362 | WP_000170715.1 | DUF3560 domain-containing protein | - |
| H9212_RS24905 (121443) | 121443..121673 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| H9212_RS24910 (122187) | 122187..122341 | + | 155 | Protein_136 | hypothetical protein | - |
| H9212_RS24915 (122673) | 122673..122864 | - | 192 | WP_065800505.1 | hypothetical protein | - |
| H9212_RS24920 (122861) | 122861..123325 | - | 465 | WP_072657562.1 | DUF1380 family protein | - |
| H9212_RS24925 (123325) | 123325..123750 | - | 426 | WP_001198922.1 | antirestriction protein | - |
| H9212_RS24930 (124152) | 124152..124916 | + | 765 | Protein_140 | IS110 family transposase ISEc32 | Transposase |
| H9212_RS24940 (125678) | 125678..126013 | - | 336 | WP_000343070.1 | hypothetical protein | - |
| H9212_RS24945 (126082) | 126082..126429 | - | 348 | WP_001350917.1 | hypothetical protein | - |
| H9212_RS24950 (126426) | 126426..126595 | - | 170 | Protein_144 | hypothetical protein | - |
| H9212_RS24955 (127361) | 127361..128332 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| H9212_RS24960 (128332) | 128332..129498 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| H9212_RS24970 (130651) | 130651..132153 | - | 1503 | WP_072657541.1 | hypothetical protein | - |
| H9212_RS24975 (132782) | 132782..133207 | - | 426 | WP_012300440.1 | hypothetical protein | - |
| H9212_RS24980 (133349) | 133349..133828 | + | 480 | WP_000190053.1 | hypothetical protein | - |
| H9212_RS24985 (134268) | 134268..134519 | + | 252 | WP_013362826.1 | hypothetical protein | - |
| H9212_RS24990 (134492) | 134492..134623 | - | 132 | Protein_152 | phosphopyruvate hydratase | - |
| H9212_RS24995 (134621) | 134621..134878 | + | 258 | Protein_153 | Tn3 family transposase | - |
| H9212_RS25000 (135112) | 135112..135969 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| H9212_RS25005 (135966) | 135966..136823 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| H9212_RS25010 (136820) | 136820..137647 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| H9212_RS25015 (137647) | 137647..138561 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| H9212_RS25020 (138917) | 138917..139614 | + | 698 | WP_223155668.1 | IS1 family transposase IS1S | Transposase |
| H9212_RS25025 (139794) | 139794..140307 | - | 514 | Protein_159 | DUF4113 domain-containing protein | - |
| H9212_RS25030 (140368) | 140368..140472 | - | 105 | Protein_160 | AAA family ATPase | - |
| H9212_RS25035 (140474) | 140474..140797 | - | 324 | Protein_161 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|