MGE detailed information
MGE type: Prophage MGE length: 93879 bp
Accession: NZ_CP060974 Location: 3706037..3799915 Organism: Escherichia coli strain EC4 Replicon: chromosome
Accession: NZ_CP060974 Location: 3706037..3799915 Organism: Escherichia coli strain EC4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9192_RS17955 (3701894) | 3701894..3702850 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| H9192_RS17960 (3702901) | 3702901..3703239 | + | 339 | Protein_3532 | LysR substrate-binding domain-containing protein | - |
| H9192_RS17965 (3703583) | 3703583..3703942 | + | 360 | WP_001350215.1 | hypothetical protein | - |
| H9192_RS17970 (3703935) | 3703935..3704477 | - | 543 | WP_025693443.1 | plasmid pRiA4b ORF-3 family protein | - |
| H9192_RS17975 (3704598) | 3704598..3704783 | - | 186 | WP_000188903.1 | hypothetical protein | - |
| H9192_RS17980 (3705081) | 3705081..3705362 | - | 282 | WP_000617443.1 | PerC family transcriptional regulator | - |
| H9192_RS17985 (3705594) | 3705594..3705785 | - | 192 | WP_000188906.1 | hypothetical protein | - |
| H9192_RS17990 (3706064) | 3706064..3706222 | + | 159 | WP_049066248.1 | AlpA family phage regulatory protein | - |
| H9192_RS17995 (3707256) | 3707256..3707654 | + | 399 | WP_001426179.1 | hypothetical protein | - |
| H9192_RS18000 (3707716) | 3707716..3709821 | - | 2106 | WP_025693498.1 | hypothetical protein | - |
| H9192_RS18005 (3709821) | 3709821..3711242 | - | 1422 | WP_025693499.1 | phage DNA ejection protein | - |
| H9192_RS18010 (3711242) | 3711242..3711919 | - | 678 | WP_000909175.1 | hypothetical protein | - |
| H9192_RS18015 (3711913) | 3711913..3712374 | - | 462 | WP_000420674.1 | DUF2824 family protein | - |
| H9192_RS18020 (3712391) | 3712391..3712552 | - | 162 | WP_001018524.1 | hypothetical protein | - |
| H9192_RS18025 (3713137) | 3713137..3715893 | - | 2757 | WP_001585368.1 | TOPRIM and DUF927 domain-containing protein | - |
| H9192_RS18030 (3715880) | 3715880..3716251 | - | 372 | WP_001208878.1 | hypothetical protein | - |
| H9192_RS18035 (3716244) | 3716244..3716585 | - | 342 | WP_000628967.1 | hypothetical protein | - |
| H9192_RS18040 (3716596) | 3716596..3717198 | - | 603 | WP_001058748.1 | hypothetical protein | - |
| H9192_RS18045 (3717191) | 3717191..3717412 | - | 222 | WP_000181940.1 | hypothetical protein | - |
| H9192_RS18050 (3717409) | 3717409..3717672 | - | 264 | WP_001024675.1 | hypothetical protein | - |
| H9192_RS18055 (3717669) | 3717669..3717863 | - | 195 | WP_001065738.1 | hypothetical protein | - |
| H9192_RS18060 (3718067) | 3718067..3718261 | - | 195 | WP_001351215.1 | host cell division inhibitor Icd-like protein | - |
| H9192_RS18065 (3718288) | 3718288..3718635 | - | 348 | Protein_3553 | ash family protein | - |
| H9192_RS18070 (3718917) | 3718917..3719099 | - | 183 | WP_000476150.1 | DUF4222 domain-containing protein | - |
| H9192_RS18075 (3719092) | 3719092..3719925 | - | 834 | WP_032312024.1 | antA/AntB antirepressor family protein | - |
| H9192_RS18080 (3719938) | 3719938..3720369 | - | 432 | WP_000412531.1 | hypothetical protein | - |
| H9192_RS18085 (3720369) | 3720369..3720572 | - | 204 | WP_000035054.1 | AlpA family transcriptional regulator | - |
| H9192_RS18090 (3721000) | 3721000..3722214 | - | 1215 | WP_000772643.1 | hypothetical protein ; Integrase | Integrase |
| H9192_RS18095 (3722774) | 3722774..3724204 | - | 1431 | WP_001460374.1 | hypothetical protein | - |
| H9192_RS18100 (3724814) | 3724814..3724938 | - | 125 | Protein_3560 | capsid protein | - |
| H9192_RS18105 (3724938) | 3724938..3725102 | - | 165 | Protein_3561 | tail fiber assembly protein | - |
| H9192_RS18110 (3725264) | 3725264..3725932 | + | 669 | WP_122985287.1 | class I SAM-dependent methyltransferase | - |
| H9192_RS18115 (3725987) | 3725987..3726118 | - | 132 | Protein_3563 | tail fiber assembly protein | - |
| H9192_RS18120 (3726170) | 3726170..3727054 | - | 885 | WP_223372511.1 | tail fiber domain-containing protein | - |
| H9192_RS18125 (3728954) | 3728954..3729946 | - | 993 | Protein_3565 | prophage tail fiber N-terminal domain-containing protein | - |
| H9192_RS18130 (3730011) | 3730011..3730610 | - | 600 | WP_032329899.1 | hypothetical protein | VF |
| H9192_RS18135 (3730681) | 3730681..3734178 | - | 3498 | WP_112834464.1 | host specificity protein J | - |
| H9192_RS18140 (3734239) | 3734239..3734811 | - | 573 | WP_000847669.1 | tail assembly protein | - |
| H9192_RS18145 (3734808) | 3734808..3735551 | - | 744 | WP_211053410.1 | C40 family peptidase | - |
| H9192_RS18150 (3735556) | 3735556..3736254 | - | 699 | WP_241461866.1 | phage minor tail protein L | - |
| H9192_RS18155 (3736264) | 3736264..3736593 | - | 330 | WP_000447253.1 | phage tail protein | - |
| H9192_RS18160 (3736593) | 3736593..3739667 | - | 3075 | WP_086598300.1 | phage tail tape measure protein | - |
| H9192_RS18165 (3739639) | 3739639..3739968 | - | 330 | WP_001161005.1 | phage tail assembly protein T | - |
| H9192_RS18170 (3739977) | 3739977..3740363 | - | 387 | WP_001300035.1 | phage minor tail protein G | - |
| H9192_RS18175 (3740424) | 3740424..3741167 | - | 744 | WP_165468681.1 | phage tail protein | - |
| H9192_RS18180 (3741179) | 3741179..3741580 | - | 402 | WP_094319436.1 | phage minor tail U family protein | - |
| H9192_RS18185 (3741577) | 3741577..3742155 | - | 579 | WP_086598303.1 | phage tail protein | - |
| H9192_RS18190 (3742167) | 3742167..3742442 | - | 276 | WP_001283144.1 | DNA breaking-rejoining protein | - |
| H9192_RS18195 (3742435) | 3742435..3742758 | - | 324 | WP_001097050.1 | DUF2190 family protein | - |
| H9192_RS18200 (3742845) | 3742845..3744872 | - | 2028 | WP_086598304.1 | hypothetical protein | VF |
| H9192_RS18205 (3744817) | 3744817..3746325 | - | 1509 | WP_000985939.1 | phage portal protein | - |
| H9192_RS18210 (3746325) | 3746325..3746537 | - | 213 | WP_001072973.1 | hypothetical protein | - |
| H9192_RS18215 (3746534) | 3746534..3748636 | - | 2103 | WP_000934110.1 | phage terminase large subunit family protein | - |
| H9192_RS18220 (3748636) | 3748636..3749131 | - | 496 | Protein_3584 | DUF1441 family protein | - |
| H9192_RS18225 (3749807) | 3749807..3749959 | - | 153 | WP_001139675.1 | hypothetical protein | - |
| H9192_RS18230 (3749947) | 3749947..3750414 | - | 468 | WP_001341210.1 | lysis system i-spanin subunit Rz | - |
| H9192_RS18235 (3750411) | 3750411..3750908 | - | 498 | WP_001135250.1 | lysozyme RrrD | - |
| H9192_RS18240 (3750908) | 3750908..3751123 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| H9192_RS18245 (3751191) | 3751191..3752243 | - | 1053 | WP_241461867.1 | site-specific DNA-methyltransferase | - |
| H9192_RS18250 (3752394) | 3752394..3752597 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| H9192_RS18255 (3752788) | 3752788..3753756 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| H9192_RS18260 (3753915) | 3753915..3755693 | + | 1779 | WP_233706513.1 | AAA family ATPase | - |
| H9192_RS18265 (3755720) | 3755720..3756754 | + | 1035 | WP_063083632.1 | DNA cytosine methyltransferase | - |
| H9192_RS18270 (3756778) | 3756778..3757119 | - | 342 | WP_063083634.1 | antiterminator Q family protein | - |
| H9192_RS18275 (3757137) | 3757137..3758126 | - | 990 | WP_024211833.1 | DUF968 domain-containing protein | - |
| H9192_RS18280 (3758134) | 3758134..3758943 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| H9192_RS18285 (3758963) | 3758963..3759352 | - | 390 | WP_000767134.1 | RusA family crossover junction endodeoxyribonuclease | - |
| H9192_RS18290 (3759349) | 3759349..3759675 | - | 327 | WP_000210189.1 | LexA family transcriptional regulator | - |
| H9192_RS18295 (3759672) | 3759672..3760325 | - | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| H9192_RS18300 (3760325) | 3760325..3760819 | - | 495 | WP_001305611.1 | PerC family transcriptional regulator | - |
| H9192_RS18305 (3760816) | 3760816..3761808 | - | 993 | WP_241461868.1 | hypothetical protein | - |
| H9192_RS18310 (3761805) | 3761805..3762029 | - | 225 | WP_000620696.1 | hypothetical protein | - |
| H9192_RS18315 (3762026) | 3762026..3762952 | - | 927 | WP_228283145.1 | Rha family phage regulatory protein | - |
| H9192_RS18320 (3762942) | 3762942..3763040 | - | 99 | Protein_3604 | DUF4222 domain-containing protein | - |
| H9192_RS18325 (3763186) | 3763186..3763737 | - | 552 | WP_000521508.1 | protein YmfL | - |
| H9192_RS18330 (3763781) | 3763781..3763981 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| H9192_RS18335 (3764072) | 3764072..3764746 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| H9192_RS18340 (3764981) | 3764981..3765187 | + | 207 | WP_000549623.1 | hypothetical protein | - |
| H9192_RS18345 (3765159) | 3765159..3765593 | - | 435 | WP_000016389.1 | hypothetical protein | - |
| H9192_RS18350 (3765737) | 3765737..3766056 | + | 320 | Protein_3610 | hypothetical protein | - |
| H9192_RS18355 (3766138) | 3766138..3766674 | + | 537 | WP_000008236.1 | 5'-deoxynucleotidase | - |
| H9192_RS18360 (3766665) | 3766665..3767027 | + | 363 | WP_001242749.1 | phage protein | - |
| H9192_RS18365 (3767027) | 3767027..3767332 | + | 306 | WP_000206732.1 | protein YfdT | - |
| H9192_RS18370 (3767332) | 3767332..3767682 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| H9192_RS18375 (3767604) | 3767604..3768722 | + | 1119 | WP_001132557.1 | hypothetical protein ; Integrase | Integrase |
| H9192_RS18385 (3768927) | 3768927..3770180 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| H9192_RS18390 (3770192) | 3770192..3771295 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| H9192_RS18395 (3771583) | 3771583..3772638 | + | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| H9192_RS18400 (3772677) | 3772677..3773078 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3773796) | 3773796..3773876 | - | 81 | NuclAT_11 | - | - |
| - (3773796) | 3773796..3773876 | - | 81 | NuclAT_11 | - | - |
| - (3773796) | 3773796..3773876 | - | 81 | NuclAT_11 | - | - |
| - (3773796) | 3773796..3773876 | - | 81 | NuclAT_11 | - | - |
| H9192_RS18405 (3773136) | 3773136..3774380 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| H9192_RS18410 (3774472) | 3774472..3774930 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| H9192_RS18415 (3775191) | 3775191..3776648 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| H9192_RS18420 (3776705) | 3776705..3777226 | - | 522 | Protein_3623 | peptide chain release factor H | - |
| H9192_RS18425 (3777222) | 3777222..3777428 | - | 207 | Protein_3624 | RtcB family protein | - |
| H9192_RS18430 (3777746) | 3777746..3778198 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| H9192_RS18435 (3778208) | 3778208..3778606 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| H9192_RS18440 (3778609) | 3778609..3778902 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| H9192_RS18445 (3778954) | 3778954..3780009 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| H9192_RS18450 (3780080) | 3780080..3780865 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| H9192_RS18455 (3780837) | 3780837..3782549 | + | 1713 | Protein_3630 | hypothetical protein | VF |
| H9192_RS18460 (3782773) | 3782773..3783270 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| H9192_RS18465 (3783446) | 3783446..3784195 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| H9192_RS18470 (3784405) | 3784405..3784665 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| H9192_RS18475 (3784668) | 3784668..3784946 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| H9192_RS18480 (3785102) | 3785102..3785842 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| H9192_RS18485 (3785813) | 3785813..3786580 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| H9192_RS18490 (3786786) | 3786786..3787364 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| H9192_RS18495 (3787604) | 3787604..3790048 | + | 2445 | WP_000973083.1 | hypothetical protein | VF |
| H9192_RS18500 (3790091) | 3790091..3790537 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| H9192_RS18505 (3790718) | 3790718..3791488 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| H9192_RS18510 (3791529) | 3791529..3792665 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| H9192_RS18515 (3793096) | 3793096..3793488 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| H9192_RS18520 (3793466) | 3793466..3797698 | - | 4233 | WP_000508724.1 | hypothetical protein | VF |
| H9192_RS18525 (3797774) | 3797774..3799915 | - | 2142 | WP_032329316.1 | hypothetical protein | VF |
| H9192_RS18530 (3800125) | 3800125..3800643 | - | 519 | WP_001142958.1 | Hcp family type VI secretion system effector | - |
| H9192_RS18535 (3801338) | 3801338..3801856 | + | 519 | WP_025693502.1 | type VI secretion system contractile sheath small subunit | - |
| H9192_RS18540 (3801873) | 3801873..3802097 | + | 225 | WP_000123970.1 | hypothetical protein | - |
| H9192_RS18545 (3802148) | 3802148..3803623 | + | 1476 | WP_000056989.1 | type VI secretion system contractile sheath large subunit | - |
| H9192_RS18550 (3803630) | 3803630..3804043 | + | 414 | WP_000611744.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|