MGE detailed information
MGE type: Genomic_island MGE length: 57661 bp
Accession: NZ_CP060953 Location: 3243633..3301293 Organism: Escherichia coli strain EC8 Replicon: chromosome
Accession: NZ_CP060953 Location: 3243633..3301293 Organism: Escherichia coli strain EC8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9195_RS15595 (3240362) | 3240362..3241081 | - | 720 | WP_001540474.1 | two-component system response regulator DcuR | - |
| H9195_RS15600 (3241078) | 3241078..3242709 | - | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| H9195_RS15605 (3242890) | 3242890..3243120 | + | 231 | WP_000373293.1 | 4Fe-4S mono-cluster protein YjdI | - |
| H9195_RS15610 (3243132) | 3243132..3243404 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| H9195_RS15615 (3243633) | 3243633..3243929 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| H9195_RS15620 (3243957) | 3243957..3244130 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| H9195_RS15625 (3244249) | 3244249..3245766 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| H9195_RS15630 (3246003) | 3246003..3247460 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| H9195_RS15635 (3247519) | 3247519..3249666 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| H9195_RS15640 (3249746) | 3249746..3251080 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| H9195_RS15645 (3251446) | 3251446..3252984 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| H9195_RS15650 (3253733) | 3253733..3254302 | - | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| H9195_RS15655 (3254399) | 3254399..3254596 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| H9195_RS15660 (3254608) | 3254608..3255096 | - | 489 | WP_000777545.1 | DUF5983 family protein | - |
| H9195_RS15665 (3255093) | 3255093..3255467 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| H9195_RS15670 (3255557) | 3255557..3255925 | - | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| H9195_RS15675 (3256088) | 3256088..3256309 | - | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| H9195_RS15680 (3256372) | 3256372..3256848 | - | 477 | WP_001186786.1 | RadC family protein | - |
| H9195_RS15685 (3256864) | 3256864..3257349 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| H9195_RS15690 (3257440) | 3257440..3258258 | - | 819 | WP_001773857.1 | DUF932 domain-containing protein | - |
| H9195_RS15695 (3258348) | 3258348..3258581 | - | 234 | WP_001278283.1 | DUF905 family protein | - |
| H9195_RS15700 (3258587) | 3258587..3259264 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| H9195_RS15705 (3259412) | 3259412..3260092 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| H9195_RS15710 (3260295) | 3260295..3261179 | - | 885 | WP_001116801.1 | YfjP family GTPase | - |
| H9195_RS15715 (3261280) | 3261280..3262503 | + | 1224 | WP_001773856.1 | hypothetical protein | - |
| H9195_RS15720 (3263956) | 3263956..3264687 | + | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| H9195_RS15725 (3265034) | 3265034..3265609 | + | 576 | WP_000991593.1 | hypothetical protein | - |
| H9195_RS15730 (3265678) | 3265678..3265911 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| H9195_RS26500 (3265908) | 3265908..3266033 | + | 126 | WP_000831909.1 | hypothetical protein | - |
| H9195_RS15735 (3266162) | 3266162..3266224 | + | 63 | Protein_3076 | IS3 family transposase IS2 | Transposase |
| H9195_RS15740 (3266216) | 3266216..3266476 | - | 261 | Protein_3077 | IS3 family transposase IS2 | Transposase |
| H9195_RS15745 (3266579) | 3266579..3267724 | + | 1146 | Protein_3078 | Multidrug resistance protein MexB | VF |
| H9195_RS15750 (3267830) | 3267830..3268216 | + | 387 | WP_153782320.1 | TetR family transcriptional regulator | - |
| H9195_RS15755 (3268467) | 3268467..3268811 | + | 345 | WP_001773854.1 | Transposon Tn10 TetD protein | VF |
| H9195_RS15760 (3269168) | 3269168..3269713 | - | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| H9195_RS15765 (3269758) | 3269758..3270909 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| H9195_RS15770 (3271038) | 3271038..3272093 | - | 1056 | WP_000494233.1 | HTH-type transcriptional activator Btr | VF |
| H9195_RS15775 (3272110) | 3272110..3273372 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| H9195_RS15780 (3273922) | 3273922..3274404 | - | 483 | WP_001362989.1 | reverse transcriptase domain-containing protein | - |
| H9195_RS15785 (3274471) | 3274471..3275010 | - | 540 | WP_001332064.1 | maturase | - |
| H9195_RS15790 (3275496) | 3275496..3276401 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| H9195_RS15795 (3276538) | 3276538..3277455 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| H9195_RS15800 (3277564) | 3277564..3280116 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| H9195_RS15805 (3280165) | 3280165..3280740 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| H9195_RS15810 (3280751) | 3280751..3281050 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| H9195_RS15815 (3281074) | 3281074..3282591 | - | 1518 | WP_001773853.1 | Aldehyde-alcohol dehydrogenase | VF |
| H9195_RS15820 (3282652) | 3282652..3283437 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| H9195_RS15825 (3283459) | 3283459..3283740 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| H9195_RS15830 (3284025) | 3284025..3285221 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| H9195_RS15835 (3285250) | 3285250..3285747 | - | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| H9195_RS15840 (3285775) | 3285775..3286044 | - | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| H9195_RS15845 (3286056) | 3286056..3286781 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| H9195_RS15850 (3286765) | 3286765..3287523 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| H9195_RS15855 (3287578) | 3287578..3288264 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| H9195_RS15860 (3288404) | 3288404..3289522 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| H9195_RS15865 (3289873) | 3289873..3290372 | + | 500 | Protein_3102 | DNA-binding protein | - |
| H9195_RS15870 (3290468) | 3290468..3290701 | + | 234 | WP_000124176.1 | hypothetical protein | - |
| H9195_RS15875 (3290754) | 3290754..3290945 | - | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| H9195_RS15880 (3291625) | 3291625..3291969 | + | 345 | Protein_3105 | POTRA domain-containing protein | - |
| H9195_RS15885 (3291969) | 3291969..3292445 | + | 477 | Protein_3106 | VasL domain-containing protein | - |
| H9195_RS15890 (3292684) | 3292684..3294138 | + | 1455 | WP_231531011.1 | hypothetical protein | - |
| H9195_RS15895 (3294270) | 3294270..3296054 | + | 1785 | WP_000269403.1 | P-loop NTPase fold protein | - |
| H9195_RS15900 (3296054) | 3296054..3296806 | + | 753 | WP_000537317.1 | hypothetical protein | - |
| H9195_RS15905 (3296803) | 3296803..3298107 | + | 1305 | WP_000192872.1 | hypothetical protein | - |
| H9195_RS15910 (3298104) | 3298104..3298829 | + | 726 | WP_000020778.1 | TatD family hydrolase | - |
| H9195_RS15915 (3299382) | 3299382..3299957 | - | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| H9195_RS15920 (3299965) | 3299965..3301293 | - | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| H9195_RS15925 (3301428) | 3301428..3301613 | - | 186 | Protein_3114 | transposase domain-containing protein | - |
| H9195_RS15935 (3302860) | 3302860..3303207 | - | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| H9195_RS15940 (3303825) | 3303825..3304518 | - | 694 | Protein_3117 | IS1 family transposase | - |
| H9195_RS15945 (3304771) | 3304771..3306240 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|