MGE detailed information
MGE type: Conjugative plasmid MGE length: 116611 bp
Accession: NZ_CP060939 Location: 1..116611 Organism: Escherichia coli strain EC11 Replicon: plasmid pEC11-2
Accession: NZ_CP060939 Location: 1..116611 Organism: Escherichia coli strain EC11 Replicon: plasmid pEC11-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9198_RS23220 (H9198_23005) | 1..1014 | + | 1014 | WP_015632528.1 | plasmid replication initiator RepA | - |
| H9198_RS23225 (H9198_23010) | 2096..2524 | - | 429 | WP_071885288.1 | GFA family protein | - |
| H9198_RS23230 (H9198_23015) | 2779..3747 | - | 969 | WP_000654812.1 | IS5 family transposase IS903B | Transposase |
| H9198_RS23235 (H9198_23020) | 4120..6312 | + | 2193 | WP_004099052.1 | 1,4-alpha-glucan branching enzyme | - |
| H9198_RS23240 (H9198_23025) | 6442..7725 | + | 1284 | WP_004099051.1 | glucose-1-phosphate adenylyltransferase | - |
| H9198_RS23245 (H9198_23030) | 7814..9247 | + | 1434 | WP_009653212.1 | glycogen synthase GlgA | - |
| H9198_RS23250 (H9198_23035) | 9266..11713 | + | 2448 | WP_023157975.1 | glycogen phosphorylase | - |
| H9198_RS23255 (H9198_23040) | 11827..13470 | + | 1644 | WP_004197675.1 | phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) | - |
| H9198_RS23260 (H9198_23045) | 13595..14161 | + | 567 | WP_004197678.1 | LuxR C-terminal-related transcriptional regulator | - |
| H9198_RS23265 (H9198_23050) | 14504..14782 | + | 279 | WP_004197671.1 | hypothetical protein | - |
| H9198_RS23270 (H9198_23055) | 14810..15001 | - | 192 | Protein_11 | hypothetical protein | - |
| H9198_RS23275 (H9198_23060) | 15022..16419 | - | 1398 | WP_009653207.1 | ISNCY family transposase ISKpn21 | Transposase |
| H9198_RS23280 (H9198_23065) | 16608..17003 | - | 396 | WP_004143398.1 | ISNCY family transposase ISKpn21 | Transposase |
| H9198_RS23285 (H9198_23070) | 17052..18398 | - | 1347 | WP_077253535.1 | ISNCY family transposase ISLad2 | Transposase |
| H9198_RS23290 (H9198_23075) | 18624..19256 | + | 633 | WP_001567369.1 | hypothetical protein | - |
| H9198_RS23295 (H9198_23080) | 19285..20688 | - | 1404 | WP_039815096.1 | ISNCY family transposase ISKpn21 | Transposase |
| H9198_RS23300 (H9198_23085) | 20959..21393 | - | 435 | WP_001567367.1 | cell envelope integrity protein TolA | - |
| H9198_RS23305 (H9198_23090) | 21440..21988 | - | 549 | WP_001567366.1 | thioredoxin fold domain-containing protein | - |
| H9198_RS23310 (H9198_23095) | 22482..22790 | + | 309 | WP_001568014.1 | hypothetical protein | - |
| H9198_RS24860 | 22890..23012 | + | 123 | WP_256046161.1 | hypothetical protein | - |
| H9198_RS23315 (H9198_23100) | 23431..25569 | + | 2139 | WP_048295729.1 | AAA family ATPase | - |
| H9198_RS23320 (H9198_23105) | 25739..26155 | - | 417 | WP_080884179.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H9198_RS23325 (H9198_23110) | 26152..26382 | - | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| H9198_RS23330 (H9198_23115) | 26982..27200 | + | 219 | WP_004197642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| H9198_RS23335 (H9198_23120) | 27202..27507 | + | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| H9198_RS23340 (H9198_23125) | 27676..28071 | + | 396 | WP_072158608.1 | hypothetical protein | - |
| H9198_RS23345 (H9198_23130) | 28098..28421 | + | 324 | WP_022644730.1 | hypothetical protein | - |
| H9198_RS23350 (H9198_23135) | 28418..29434 | + | 1017 | WP_020315256.1 | hypothetical protein | - |
| H9198_RS23355 (H9198_23140) | 29769..31037 | - | 1269 | WP_019705993.1 | ISL3 family transposase ISKpn25 | Transposase |
| H9198_RS23360 (H9198_23145) | 31042..34299 | - | 3258 | WP_019705992.1 | DEAD/DEAH box helicase family protein | - |
| H9198_RS23365 (H9198_23150) | 34300..35574 | - | 1275 | WP_032436768.1 | restriction endonuclease subunit S | - |
| H9198_RS23370 (H9198_23155) | 35571..37598 | - | 2028 | WP_019706038.1 | class I SAM-dependent DNA methyltransferase | - |
| H9198_RS23375 (H9198_23160) | 37752..38546 | + | 795 | WP_004197635.1 | site-specific integrase | - |
| H9198_RS23380 | 38986..39288 | - | 303 | WP_004197636.1 | hypothetical protein | - |
| H9198_RS23385 (H9198_23170) | 39285..39911 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| H9198_RS23390 (H9198_23175) | 40544..41419 | - | 876 | WP_004197644.1 | replication initiation protein | - |
| H9198_RS23395 (H9198_23180) | 41831..43102 | - | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
| H9198_RS23400 (H9198_23185) | 43102..43533 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H9198_RS23405 (H9198_23190) | 43767..44738 | + | 972 | WP_011977821.1 | plasmid segregation protein ParM | - |
| H9198_RS23410 (H9198_23195) | 44741..45412 | + | 672 | WP_032330269.1 | plasmid partitioning/stability family protein | - |
| H9198_RS23415 (H9198_23200) | 45475..45705 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| H9198_RS23420 | 45901..46070 | + | 170 | Protein_42 | hypothetical protein | - |
| H9198_RS23425 (H9198_23210) | 46142..46843 | + | 702 | WP_001568041.1 | DNA methylase | - |
| H9198_RS23430 (H9198_23215) | 46843..47064 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| H9198_RS23435 (H9198_23220) | 47074..47493 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| H9198_RS23440 (H9198_23225) | 47547..48314 | + | 768 | WP_241409067.1 | hypothetical protein | - |
| H9198_RS23445 (H9198_23230) | 48995..49423 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| H9198_RS23450 (H9198_23235) | 49466..49972 | + | 507 | WP_023332911.1 | antirestriction protein ArdA | - |
| H9198_RS23455 (H9198_23240) | 50015..50206 | + | 192 | WP_023332910.1 | hypothetical protein | - |
| H9198_RS23460 (H9198_23245) | 50394..50648 | + | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| H9198_RS23465 (H9198_23250) | 50683..51003 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| H9198_RS23470 (H9198_23255) | 51683..51910 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| H9198_RS23475 (H9198_23260) | 52002..52232 | + | 231 | WP_009310031.1 | hypothetical protein | - |
| H9198_RS23480 (H9198_23265) | 52284..53639 | + | 1356 | WP_048235045.1 | DUF3560 domain-containing protein | - |
| H9198_RS23485 (H9198_23270) | 53687..54250 | + | 564 | WP_114504635.1 | methyltransferase | - |
| H9198_RS23490 (H9198_23275) | 55079..55621 | + | 543 | WP_023280871.1 | single-stranded DNA-binding protein | - |
| H9198_RS23495 (H9198_23280) | 55670..55918 | + | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| H9198_RS23500 (H9198_23285) | 55988..58045 | + | 2058 | WP_114504636.1 | ParB/RepB/Spo0J family partition protein | - |
| H9198_RS23505 (H9198_23290) | 58090..58521 | + | 432 | WP_020804497.1 | conjugation system SOS inhibitor PsiB | - |
| H9198_RS23510 (H9198_23295) | 58518..59246 | + | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| H9198_RS23515 (H9198_23300) | 59243..59569 | + | 327 | WP_001568059.1 | hypothetical protein | - |
| H9198_RS23520 (H9198_23305) | 59625..59999 | + | 375 | WP_023280872.1 | hypothetical protein | - |
| H9198_RS23525 (H9198_23310) | 60200..61575 | + | 1376 | WP_086937184.1 | IS3 family transposase ISKpn8 | Transposase |
| H9198_RS23530 (H9198_23315) | 61745..62785 | + | 1041 | WP_009310020.1 | ATP-binding protein | - |
| H9198_RS23535 (H9198_23320) | 62763..65273 | + | 2511 | WP_071826167.1 | S8 family peptidase | - |
| H9198_RS23540 (H9198_23325) | 65605..66678 | - | 1074 | WP_032442619.1 | IS481 family transposase ISKpn28 | Transposase |
| H9198_RS23550 (H9198_23330) | 66789..66908 | + | 120 | WP_159376494.1 | type I toxin-antitoxin system Hok family toxin | - |
| H9198_RS23555 (H9198_23335) | 67606..67878 | + | 273 | WP_032425552.1 | hypothetical protein | - |
| H9198_RS23560 (H9198_23340) | 67875..68225 | + | 351 | WP_032425551.1 | hypothetical protein | - |
| H9198_RS23565 (H9198_23345) | 68240..68557 | + | 318 | WP_015065519.1 | hypothetical protein | - |
| H9198_RS23570 (H9198_23350) | 69398..69754 | + | 357 | WP_019706019.1 | hypothetical protein | - |
| H9198_RS23575 (H9198_23355) | 69815..70027 | + | 213 | WP_019706020.1 | hypothetical protein | - |
| H9198_RS23580 (H9198_23360) | 70038..70262 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| H9198_RS23585 (H9198_23365) | 70343..70663 | + | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H9198_RS23590 (H9198_23370) | 70653..70931 | + | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| H9198_RS23595 (H9198_23375) | 70932..71396 | + | 465 | WP_114504658.1 | helix-turn-helix domain-containing protein | - |
| H9198_RS23600 (H9198_23380) | 71405..71812 | - | 408 | WP_004364961.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| H9198_RS23605 (H9198_23385) | 71908..72804 | + | 897 | WP_241409063.1 | cation transporter | - |
| H9198_RS23610 (H9198_23390) | 72808..73320 | + | 513 | WP_004863699.1 | Lipoprotein signal peptidase | VF |
| H9198_RS23615 (H9198_23395) | 73342..74631 | + | 1290 | WP_004574636.1 | ISL3 family transposase ISPst9 | Transposase |
| H9198_RS23620 (H9198_23400) | 75553..76374 | + | 822 | WP_023316395.1 | DUF932 domain-containing protein | - |
| H9198_RS23625 (H9198_23405) | 76407..76736 | + | 330 | WP_011977736.1 | DUF5983 family protein | - |
| H9198_RS23630 (H9198_23410) | 76769..77254 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| H9198_RS23635 (H9198_23415) | 77689..78081 | + | 393 | WP_032436755.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| H9198_RS23640 (H9198_23420) | 78288..78983 | + | 696 | WP_023307551.1 | transcriptional regulator TraJ family protein | - |
| H9198_RS23645 (H9198_23425) | 79067..79438 | + | 372 | WP_004208838.1 | TraY domain-containing protein | - |
| H9198_RS23650 (H9198_23430) | 79492..79860 | + | 369 | WP_023307550.1 | type IV conjugative transfer system pilin TraA | - |
| H9198_RS23655 (H9198_23435) | 79874..80179 | + | 306 | WP_004178059.1 | type IV conjugative transfer system protein TraL | - |
| H9198_RS23660 (H9198_23440) | 80199..80765 | + | 567 | WP_004152602.1 | type IV conjugative transfer system protein TraE | - |
| H9198_RS23665 (H9198_23445) | 80752..81492 | + | 741 | WP_004152497.1 | type-F conjugative transfer system secretin TraK | - |
| H9198_RS23670 (H9198_23450) | 81492..82916 | + | 1425 | WP_023307549.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| H9198_RS23675 (H9198_23455) | 82909..83328 | + | 420 | Protein_92 | conjugal transfer pilus-stabilizing protein TraP | - |
| H9198_RS23680 (H9198_23460) | 83540..84109 | + | 570 | WP_023307547.1 | type IV conjugative transfer system lipoprotein TraV | - |
| H9198_RS23685 (H9198_23465) | 84241..84651 | + | 411 | WP_023307546.1 | hypothetical protein | - |
| H9198_RS23690 (H9198_23470) | 84656..84946 | + | 291 | WP_032423381.1 | hypothetical protein | - |
| H9198_RS23695 (H9198_23475) | 84970..85188 | + | 219 | WP_004171484.1 | hypothetical protein | - |
| H9198_RS23700 (H9198_23480) | 85189..85506 | + | 318 | WP_023307544.1 | hypothetical protein | - |
| H9198_RS23705 (H9198_23485) | 85573..85977 | + | 405 | WP_065954380.1 | hypothetical protein | - |
| H9198_RS23710 (H9198_23490) | 85974..86264 | + | 291 | WP_023307542.1 | hypothetical protein | - |
| H9198_RS23715 (H9198_23495) | 86272..86670 | + | 399 | WP_072158599.1 | hypothetical protein | - |
| H9198_RS23720 (H9198_23500) | 86742..89381 | + | 2640 | WP_016528865.1 | type IV secretion system protein TraC | - |
| H9198_RS23725 (H9198_23505) | 89381..89770 | + | 390 | WP_032436749.1 | type-F conjugative transfer system protein TrbI | - |
| H9198_RS23730 (H9198_23510) | 89770..90396 | + | 627 | WP_023307538.1 | type-F conjugative transfer system protein TraW | - |
| H9198_RS23735 (H9198_23515) | 90440..91399 | + | 960 | WP_015065634.1 | conjugal transfer pilus assembly protein TraU | - |
| H9198_RS23740 (H9198_23520) | 91412..92050 | + | 639 | WP_078174825.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| H9198_RS23745 (H9198_23525) | 92109..94064 | + | 1956 | WP_241409064.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| H9198_RS23750 (H9198_23530) | 94096..94332 | + | 237 | WP_032436746.1 | conjugal transfer protein TrbE | - |
| H9198_RS23755 (H9198_23535) | 94560..94886 | + | 327 | WP_004152676.1 | hypothetical protein | - |
| H9198_RS23760 (H9198_23540) | 94907..95659 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| H9198_RS23765 (H9198_23545) | 95670..95909 | + | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| H9198_RS23770 (H9198_23550) | 95881..96438 | + | 558 | WP_004152678.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| H9198_RS23775 (H9198_23555) | 96483..96926 | + | 444 | WP_032436741.1 | F-type conjugal transfer protein TrbF | - |
| H9198_RS23780 (H9198_23560) | 96904..98283 | + | 1380 | WP_011977731.1 | conjugal transfer pilus assembly protein TraH | - |
| H9198_RS23785 (H9198_23565) | 98283..101105 | + | 2823 | WP_241409065.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| H9198_RS23790 (H9198_23570) | 101129..101731 | + | 603 | WP_023280878.1 | hypothetical protein | - |
| H9198_RS23795 (H9198_23575) | 101982..102713 | + | 732 | WP_032415736.1 | conjugal transfer complement resistance protein TraT | - |
| H9198_RS23800 | 102904..103017 | + | 114 | Protein_117 | hypothetical protein | - |
| H9198_RS23805 (H9198_23580) | 103073..105385 | + | 2313 | WP_048235023.1 | type IV conjugative transfer system coupling protein TraD | - |
| H9198_RS23810 (H9198_23585) | 105385..110646 | + | 5262 | WP_241409066.1 | Multifunctional conjugation protein TraI | Relaxase |
| H9198_RS23815 (H9198_23590) | 110736..111461 | + | 726 | WP_025712712.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| H9198_RS23820 (H9198_23595) | 111616..112212 | + | 597 | WP_042934716.1 | fertility inhibition protein FinO | - |
| H9198_RS23825 (H9198_23600) | 112232..112579 | + | 348 | WP_042934714.1 | DUF6404 family protein | - |
| H9198_RS23830 (H9198_23605) | 113050..113694 | + | 645 | WP_032436732.1 | hypothetical protein | - |
| H9198_RS23835 (H9198_23610) | 113750..114400 | + | 651 | WP_032436731.1 | DUF2726 domain-containing protein | - |
| H9198_RS23840 (H9198_23615) | 114397..114708 | + | 312 | WP_023340920.1 | hypothetical protein | - |
| H9198_RS23845 (H9198_23620) | 114814..115362 | + | 549 | WP_148839825.1 | Phospholipase D | VF |
| H9198_RS23850 (H9198_23625) | 115512..115772 | + | 261 | WP_016529614.1 | replication regulatory protein RepA | - |
| H9198_RS24865 (H9198_23630) | 116004..116075 | + | 72 | WP_071786674.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|