MGE detailed information
MGE type: Genomic_island MGE length: 27173 bp
Accession: NZ_CP060938 Location: 4378441..4405613 Organism: Escherichia coli strain EC11 Replicon: chromosome
Accession: NZ_CP060938 Location: 4378441..4405613 Organism: Escherichia coli strain EC11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - (4374029) | 4374029..4374109 | - | 81 | NuclAT_12 | - | - |
| - (4374029) | 4374029..4374109 | - | 81 | NuclAT_12 | - | - |
| - (4374029) | 4374029..4374109 | - | 81 | NuclAT_12 | - | - |
| - (4374029) | 4374029..4374109 | - | 81 | NuclAT_12 | - | - |
| H9198_RS21145 (4374705) | 4374705..4375163 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| H9198_RS21150 (4375424) | 4375424..4376881 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| H9198_RS21155 (4376938) | 4376938..4377459 | - | 522 | Protein_4142 | peptide chain release factor H | - |
| H9198_RS21160 (4377455) | 4377455..4377661 | - | 207 | Protein_4143 | RtcB family protein | - |
| H9198_RS21165 (4377979) | 4377979..4378431 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| H9198_RS21170 (4378441) | 4378441..4378839 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| H9198_RS21175 (4378842) | 4378842..4379135 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| H9198_RS21180 (4379187) | 4379187..4380242 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| H9198_RS21185 (4380313) | 4380313..4381098 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| H9198_RS21190 (4381070) | 4381070..4382782 | + | 1713 | Protein_4149 | Flagellar biosynthesis protein FlhA | VF |
| H9198_RS21195 (4383006) | 4383006..4383503 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| H9198_RS21200 (4383679) | 4383679..4384428 | - | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| H9198_RS21205 (4384638) | 4384638..4384898 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| H9198_RS21210 (4384901) | 4384901..4385179 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| H9198_RS21215 (4385335) | 4385335..4386075 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| H9198_RS21220 (4386046) | 4386046..4386813 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| H9198_RS21225 (4387019) | 4387019..4387597 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| H9198_RS21230 (4387837) | 4387837..4390281 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| H9198_RS21235 (4390324) | 4390324..4390770 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| H9198_RS21240 (4390951) | 4390951..4391721 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| H9198_RS21245 (4391762) | 4391762..4392898 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| H9198_RS21250 (4393329) | 4393329..4393505 | - | 177 | WP_000008098.1 | hypothetical protein | - |
| H9198_RS21255 (4393502) | 4393502..4393720 | - | 219 | WP_001101841.1 | hypothetical protein | - |
| H9198_RS21260 (4393698) | 4393698..4397930 | - | 4233 | WP_000508724.1 | Protein RhsD | VF |
| H9198_RS21265 (4398006) | 4398006..4400147 | - | 2142 | WP_032329316.1 | Actin cross-linking toxin VgrG1 | VF |
| H9198_RS21270 (4400187) | 4400187..4400324 | - | 138 | WP_001297813.1 | hypothetical protein | - |
| H9198_RS21275 (4400357) | 4400357..4400875 | - | 519 | WP_001142958.1 | Major exported protein | VF |
| H9198_RS21280 (4401570) | 4401570..4402070 | + | 501 | WP_000037397.1 | hypothetical protein | VF |
| H9198_RS21285 (4402105) | 4402105..4402329 | + | 225 | WP_000123970.1 | hypothetical protein | - |
| H9198_RS21290 (4402380) | 4402380..4403456 | + | 1077 | Protein_4169 | hypothetical protein | VF |
| H9198_RS21295 (4403564) | 4403564..4404772 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| H9198_RS21300 (4404786) | 4404786..4405193 | + | 408 | Protein_4171 | hypothetical protein | VF |
| H9198_RS21305 (4405200) | 4405200..4405613 | + | 414 | WP_000611744.1 | hypothetical protein | VF |
| H9198_RS21310 (4405617) | 4405617..4407467 | + | 1851 | WP_000393852.1 | type VI secretion system baseplate subunit TssF | - |
| H9198_RS21315 (4407431) | 4407431..4408513 | + | 1083 | WP_000348793.1 | type VI secretion system baseplate subunit TssG | - |
| H9198_RS21320 (4408538) | 4408538..4409818 | + | 1281 | WP_001113709.1 | type VI secretion system-associated FHA domain protein TagH | - |
| H9198_RS21325 (4409815) | 4409815..4410339 | + | 525 | WP_001080149.1 | type VI secretion system lipoprotein TssJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|