MGE detailed information
MGE type: Conjugative plasmid MGE length: 145694 bp
Accession: NZ_CP060929 Location: 1..145694 Organism: Escherichia coli strain EC13 Replicon: plasmid pEC13-2
Accession: NZ_CP060929 Location: 1..145694 Organism: Escherichia coli strain EC13 Replicon: plasmid pEC13-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9200_RS22925 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| H9200_RS22930 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| H9200_RS22935 (2124) | 2124..2312 | - | 189 | WP_001312821.1 | hypothetical protein | - |
| H9200_RS22940 (2687) | 2687..3589 | - | 903 | WP_001312822.1 | antimicrobial resistance protein Mig-14 | - |
| H9200_RS22945 (3658) | 3658..4767 | - | 1110 | WP_104698210.1 | SDR family oxidoreductase | - |
| H9200_RS22950 (5200) | 5200..6153 | - | 954 | WP_000280980.1 | omptin family outer membrane protease | - |
| H9200_RS22955 (6257) | 6257..6646 | + | 390 | WP_001332050.1 | outer membrane protease | - |
| H9200_RS22960 (7450) | 7450..7629 | - | 180 | Protein_7 | integrase core domain-containing protein | - |
| H9200_RS22965 (7768) | 7768..8058 | + | 291 | Protein_8 | transposase | - |
| H9200_RS22970 (8126) | 8126..8823 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| H9200_RS22975 (9238) | 9238..9531 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| H9200_RS22985 (9615) | 9615..9763 | - | 149 | Protein_11 | Rz1 family lipoprotein | - |
| H9200_RS22990 (9720) | 9720..9827 | - | 108 | Protein_12 | lysis system i-spanin subunit Rz | - |
| H9200_RS22995 (10342) | 10342..11364 | + | 1023 | Protein_13 | integrase core domain-containing protein | - |
| H9200_RS23000 (12675) | 12675..13790 | + | 1116 | WP_001318220.1 | salmochelin biosynthesis C-glycosyltransferase IroB | - |
| H9200_RS23005 (13930) | 13930..17589 | + | 3660 | WP_104698202.1 | salmochelin/enterobactin export ABC transporter IroC | - |
| H9200_RS23010 (17693) | 17693..18922 | + | 1230 | WP_001552738.1 | catecholate siderophore esterase IroD | - |
| H9200_RS23015 (19007) | 19007..19963 | + | 957 | WP_032072160.1 | catecholate siderophore esterase IroE | - |
| H9200_RS23020 (20008) | 20008..22185 | - | 2178 | WP_104698201.1 | siderophore salmochelin receptor IroN | - |
| H9200_RS23030 (23485) | 23485..23559 | - | 75 | Protein_20 | colicin | - |
| H9200_RS23035 (23537) | 23537..23773 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| H9200_RS23040 (24315) | 24315..24518 | - | 204 | Protein_22 | hypothetical protein | - |
| H9200_RS23045 (24691) | 24691..24858 | + | 168 | Protein_23 | colicin-B | - |
| H9200_RS23050 (24876) | 24876..25403 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| H9200_RS23055 (25647) | 25647..26462 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| H9200_RS23060 (26512) | 26512..26865 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| H9200_RS23065 (27042) | 27042..27833 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| H9200_RS23070 (27830) | 27830..28519 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| H9200_RS23075 (28563) | 28563..28913 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| H9200_RS23080 (29445) | 29445..30134 | + | 690 | WP_001513525.1 | helix-turn-helix domain-containing protein | - |
| H9200_RS23085 (30166) | 30166..30855 | - | 690 | WP_001513524.1 | RES family NAD+ phosphorylase | - |
| H9200_RS23090 (31311) | 31311..34520 | - | 3210 | WP_013362823.1 | hypothetical protein | - |
| H9200_RS23095 (34909) | 34909..35166 | + | 258 | WP_013362822.1 | hypothetical protein | - |
| H9200_RS23100 (35166) | 35166..35756 | + | 591 | WP_013362821.1 | hypothetical protein | - |
| H9200_RS23105 (36021) | 36021..37577 | + | 1557 | WP_000818361.1 | AAA family ATPase | - |
| H9200_RS23110 (37772) | 37772..37966 | + | 195 | Protein_36 | proQ/FINO family protein | - |
| H9200_RS23115 (37999) | 37999..39513 | - | 1515 | Protein_37 | Tn3-like element TnAs1 family transposase | - |
| H9200_RS23120 (39579) | 39579..40283 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| H9200_RS23125 (40586) | 40586..41461 | + | 876 | WP_001617865.1 | extended-spectrum class A beta-lactamase CTX-M-14 | - |
| H9200_RS23130 (41496) | 41496..41813 | + | 318 | Protein_40 | IS5/IS1182 family transposase | - |
| H9200_RS23135 (42073) | 42073..42489 | + | 417 | WP_014839980.1 | fosfomycin resistance glutathione transferase FosA3 | - |
| H9200_RS23140 (42494) | 42494..43012 | - | 519 | WP_014839979.1 | FidL-like protein | - |
| H9200_RS23145 (43012) | 43012..43758 | - | 747 | WP_071448054.1 | winged helix-turn-helix domain-containing protein | - |
| H9200_RS23150 (43764) | 43764..44468 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| H9200_RS23155 (44582) | 44582..45358 | + | 777 | WP_001199192.1 | aminoglycoside N-acetyltransferase AAC(3)-IVa | - |
| H9200_RS23160 (45587) | 45587..46487 | + | 901 | Protein_46 | phosphotransferase | - |
| H9200_RS23165 (46562) | 46562..46801 | + | 240 | Protein_47 | AAC(3) family N-acetyltransferase | - |
| H9200_RS23170 (46909) | 46909..47661 | - | 753 | WP_000602738.1 | IS6 family transposase | - |
| H9200_RS23175 (47723) | 47723..49246 | + | 1524 | Protein_49 | Tn3 family transposase | - |
| H9200_RS23180 (49306) | 49306..49434 | + | 129 | WP_032073144.1 | hypothetical protein | - |
| H9200_RS23185 (49472) | 49472..49957 | + | 486 | WP_006581703.1 | hypothetical protein | - |
| H9200_RS23195 (51334) | 51334..52149 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| H9200_RS23200 (52236) | 52236..52478 | + | 243 | Protein_54 | phosphoglucosamine mutase | - |
| H9200_RS23205 (52714) | 52714..54207 | - | 1494 | WP_015344975.1 | IS91-like element ISVsa3 family transposase | - |
| H9200_RS23210 (54319) | 54319..54624 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| H9200_RS23215 (54652) | 54652..55866 | - | 1215 | WP_000214122.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| H9200_RS23220 (56083) | 56083..56967 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| H9200_RS23225 (56998) | 56998..57828 | - | 831 | Protein_59 | IS91-like element ISVsa3 family transposase | - |
| H9200_RS23230 (57892) | 57892..58596 | + | 705 | WP_001067784.1 | IS6-like element IS1006 family transposase | - |
| H9200_RS23235 (58681) | 58681..59157 | - | 477 | WP_223171565.1 | hypothetical protein | - |
| H9200_RS23240 (59091) | 59091..62042 | - | 2952 | WP_015344976.1 | Tn3-like element TnAs3 family transposase | - |
| H9200_RS23245 (62045) | 62045..62605 | - | 561 | WP_000147567.1 | recombinase family protein | - |
| H9200_RS23250 (62731) | 62731..63081 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| H9200_RS23255 (63284) | 63284..64297 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| H9200_RS23260 (64455) | 64455..64928 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| H9200_RS23265 (65002) | 65002..65706 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| H9200_RS23270 (65808) | 65808..66287 | + | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| H9200_RS23275 (66357) | 66357..69509 | - | 3153 | WP_000347934.1 | multidrug efflux RND transporter permease subunit OqxB | - |
| H9200_RS23280 (69533) | 69533..70708 | - | 1176 | WP_002914189.1 | multidrug efflux RND transporter periplasmic adaptor subunit OqxA | - |
| H9200_RS23285 (71028) | 71028..71732 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| H9200_RS23290 (72004) | 72004..72396 | + | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| H9200_RS23295 (72716) | 72716..73099 | - | 384 | WP_104698215.1 | bleomycin binding protein | - |
| H9200_RS23300 (73129) | 73129..73832 | - | 704 | Protein_74 | IS6-like element IS26 family transposase | - |
| H9200_RS23305 (73900) | 73900..75198 | + | 1299 | Protein_75 | Tn3-like element Tn3 family transposase | - |
| H9200_RS23310 (75298) | 75298..75573 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| H9200_RS23315 (75587) | 75587..75937 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| H9200_RS23320 (76009) | 76009..76443 | + | 435 | WP_000429836.1 | Hg(II)-responsive transcriptional regulator | - |
| H9200_RS23330 (77496) | 77496..77897 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| H9200_RS23335 (77830) | 77830..78087 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| H9200_RS23340 (78180) | 78180..78488 | - | 309 | WP_226116723.1 | CPBP family intramembrane metalloprotease | - |
| H9200_RS23345 (78430) | 78430..78822 | - | 393 | WP_000616804.1 | histidine phosphatase family protein | - |
| H9200_RS23350 (79762) | 79762..80619 | - | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| H9200_RS23355 (80612) | 80612..81094 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| H9200_RS23360 (81087) | 81087..81134 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| H9200_RS23365 (81125) | 81125..81376 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| H9200_RS23370 (81393) | 81393..81650 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| H9200_RS23375 (81934) | 81934..82083 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (82127) | 82127..82188 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (82127) | 82127..82188 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (82127) | 82127..82188 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (82127) | 82127..82188 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| H9200_RS23380 (82444) | 82444..82518 | - | 75 | Protein_90 | endonuclease | - |
| H9200_RS23385 (82764) | 82764..82976 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| H9200_RS23390 (83112) | 83112..83672 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| H9200_RS23395 (83775) | 83775..84635 | - | 861 | WP_000704514.1 | alpha/beta hydrolase | - |
| H9200_RS23400 (84694) | 84694..85440 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| H9200_RS23405 (85460) | 85460..90730 | - | 5271 | WP_000986962.1 | conjugative transfer relaxase/helicase TraI | - |
| H9200_RS23410 (90812) | 90812..91039 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| H9200_RS23415 (91039) | 91039..91437 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H9200_RS23420 (91446) | 91446..93599 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| H9200_RS23425 (93852) | 93852..94583 | - | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
| H9200_RS23430 (94615) | 94615..95112 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
| H9200_RS23435 (95128) | 95128..97950 | - | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| H9200_RS23440 (97947) | 97947..99320 | - | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
| H9200_RS23445 (99320) | 99320..99700 | - | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
| H9200_RS23450 (99687) | 99687..100028 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| H9200_RS23455 (99958) | 99958..100503 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| H9200_RS23460 (100490) | 100490..100774 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| H9200_RS23465 (100855) | 100855..101169 | + | 315 | WP_001324103.1 | hypothetical protein | - |
| H9200_RS23470 (101171) | 101171..101518 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| H9200_RS23475 (101534) | 101534..102277 | - | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| H9200_RS23480 (102270) | 102270..102527 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| H9200_RS23485 (102554) | 102554..104362 | - | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| H9200_RS23490 (104359) | 104359..104997 | - | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| H9200_RS23495 (105006) | 105006..105998 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| H9200_RS23500 (105995) | 105995..106627 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| H9200_RS23505 (106624) | 106624..107010 | - | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| H9200_RS23510 (107007) | 107007..109634 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| H9200_RS23515 (109794) | 109794..110015 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| H9200_RS23520 (110150) | 110150..110665 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| H9200_RS23525 (110662) | 110662..110847 | - | 186 | WP_234027642.1 | conjugal transfer protein TrbG | - |
| H9200_RS23530 (110925) | 110925..111116 | - | 192 | WP_032072783.1 | conjugal transfer protein TrbD | - |
| H9200_RS23535 (111109) | 111109..111699 | - | 591 | WP_001376242.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| H9200_RS23540 (111689) | 111689..113116 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| H9200_RS23545 (113116) | 113116..113844 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| H9200_RS23550 (113831) | 113831..114397 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| H9200_RS23555 (114419) | 114419..114730 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| H9200_RS23560 (114745) | 114745..115110 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| H9200_RS23565 (115143) | 115143..115544 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| H9200_RS23570 (115637) | 115637..116326 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| H9200_RS23575 (116513) | 116513..116896 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| H9200_RS23580 (117217) | 117217..117819 | + | 603 | WP_000243712.1 | transglycosylase SLT domain-containing protein | - |
| H9200_RS23585 (118116) | 118116..118937 | - | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| H9200_RS23590 (119055) | 119055..119342 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| H9200_RS23595 (119367) | 119367..119573 | - | 207 | WP_000547968.1 | hypothetical protein | - |
| H9200_RS23600 (119643) | 119643..119815 | + | 173 | Protein_134 | hypothetical protein | - |
| H9200_RS23605 (119813) | 119813..120043 | - | 231 | WP_071586998.1 | hypothetical protein | - |
| H9200_RS23610 (120263) | 120263..120388 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| H9200_RS23615 (120330) | 120330..120479 | - | 150 | Protein_137 | plasmid maintenance protein Mok | - |
| - (120465) | 120465..120689 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (120465) | 120465..120689 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (120465) | 120465..120689 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (120465) | 120465..120689 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| H9200_RS23620 (120501) | 120501..120689 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| H9200_RS23625 (120658) | 120658..121420 | - | 763 | Protein_139 | plasmid SOS inhibition protein A | - |
| H9200_RS23630 (121417) | 121417..121851 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| H9200_RS23635 (121906) | 121906..122103 | - | 198 | Protein_141 | hypothetical protein | - |
| H9200_RS23640 (122131) | 122131..122364 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
| H9200_RS23645 (122432) | 122432..122971 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| H9200_RS23650 (122997) | 122997..123203 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| H9200_RS23655 (123273) | 123273..123353 | + | 81 | Protein_145 | hypothetical protein | - |
| H9200_RS23660 (123536) | 123536..123705 | - | 170 | Protein_146 | hypothetical protein | - |
| H9200_RS23665 (124342) | 124342..125313 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| H9200_RS23670 (125313) | 125313..126479 | - | 1167 | WP_001238646.1 | plasmid-partitioning protein SopA | - |
| H9200_RS23680 (127961) | 127961..130162 | - | 2202 | WP_000973520.1 | ferric aerobactin receptor IutA | - |
| H9200_RS23685 (130188) | 130188..131521 | - | 1334 | Protein_151 | NADPH-dependent L-lysine N(6)-monooxygenase IucD | - |
| H9200_RS23690 (131518) | 131518..133260 | - | 1743 | WP_001015721.1 | NIS family aerobactin synthetase IucC | - |
| H9200_RS23695 (133260) | 133260..134207 | - | 948 | WP_106108255.1 | N(6)-hydroxylysine O-acetyltransferase IucB | - |
| H9200_RS23700 (134208) | 134208..135932 | - | 1725 | WP_000602863.1 | NIS family aerobactin synthetase IucA | - |
| H9200_RS23705 (136068) | 136068..137261 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| H9200_RS23710 (137641) | 137641..138021 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| H9200_RS23715 (138362) | 138362..138775 | - | 414 | Protein_157 | phosphopyruvate hydratase | - |
| H9200_RS23720 (138773) | 138773..139030 | + | 258 | Protein_158 | Tn3 family transposase | - |
| H9200_RS23725 (139264) | 139264..140121 | - | 858 | WP_000968139.1 | iron/manganese ABC transporter permease subunit SitD | - |
| H9200_RS23730 (140118) | 140118..140975 | - | 858 | WP_001101723.1 | iron/manganese ABC transporter permease subunit SitC | - |
| H9200_RS23735 (140972) | 140972..141799 | - | 828 | WP_000983710.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| H9200_RS23740 (141799) | 141799..142713 | - | 915 | WP_000949004.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| H9200_RS23745 (143069) | 143069..143766 | + | 698 | WP_223155668.1 | IS1-like element IS1A family transposase | - |
| H9200_RS23750 (143946) | 143946..144459 | - | 514 | Protein_164 | DUF4113 domain-containing protein | - |
| H9200_RS23755 (144520) | 144520..144624 | - | 105 | Protein_165 | AAA family ATPase | - |
| H9200_RS23760 (144626) | 144626..144949 | - | 324 | Protein_166 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|