NZ_CP0609194339202..4508319

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 169118 bp
Accession: NZ_CP060919        Location: 4339202..4508319         Organism: Escherichia coli strain EC15       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
H9202_RS21240 (4334595) 4334595..4334831 - 237 WP_001350028.1 DUF1435 domain-containing protein -
H9202_RS21245 (4334972) 4334972..4335760 + 789 WP_000331602.1 siderophore-iron reductase FhuF -
H9202_RS21250 (4335798) 4335798..4336475 - 678 WP_001300509.1 DNA-binding transcriptional activator BglJ -
H9202_RS21255 (4336433) 4336433..4337158 - 726 WP_000936630.1 response regulator transcription factor -
H9202_RS21260 (4337553) 4337553..4338767 + 1215 Protein_4153 DNA primase -
H9202_RS21265 (4338785) 4338785..4339132 + 348 WP_001055900.1 conjugal transfer protein -
H9202_RS21270 (4339129) 4339129..4339821 + 693 WP_000138552.1 DotI/IcmL family type IV secretion protein -
H9202_RS21275 (4339832) 4339832..4340815 + 984 WP_241408363.1 hypothetical protein VF
H9202_RS21280 (4340818) 4340818..4342107 + 1290 WP_011264042.1 conjugal transfer protein TraO -
H9202_RS21285 (4342107) 4342107..4342811 + 705 WP_001493811.1 IncI1-type conjugal transfer protein TraP -
H9202_RS21290 (4342811) 4342811..4343338 + 528 WP_001055569.1 conjugal transfer protein TraQ -
H9202_RS21295 (4343389) 4343389..4343793 + 405 WP_000086965.1 IncI1-type conjugal transfer protein TraR -
H9202_RS21300 (4343857) 4343857..4344045 + 189 WP_001277255.1 putative conjugal transfer protein TraS -
H9202_RS21305 (4344029) 4344029..4344151 + 123 Protein_4162 conjugal transfer protein TraT -
H9202_RS21310 (4344239) 4344239..4345261 + 1023 WP_000255946.1 IS21 family transposase IS100kyp Transposase
H9202_RS21315 (4345258) 4345258..4346040 + 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
H9202_RS21320 (4346108) 4346108..4346788 + 681 Protein_4165 IncI1-type conjugal transfer protein TraT -
H9202_RS21325 (4346878) 4346878..4349922 + 3045 WP_012783939.1 IncI1-type conjugal transfer protein TraU -
H9202_RS21330 (4349922) 4349922..4350536 + 615 WP_000337394.1 IncI1-type conjugal transfer protein TraV -
H9202_RS21335 (4350503) 4350503..4351705 + 1203 WP_012783938.1 IncI1-type conjugal transfer protein TraW -
H9202_RS21340 (4351734) 4351734..4352318 + 585 WP_012783937.1 conjugal transfer protein TraX -
H9202_RS21345 (4352415) 4352415..4354583 + 2169 WP_015508354.1 DotA/TraY family protein -
H9202_RS21350 (4354654) 4354654..4355316 + 663 WP_012783935.1 plasmid IncI1-type surface exclusion protein ExcA -
H9202_RS21355 (4355388) 4355388..4355597 - 210 WP_000062603.1 HEAT repeat domain-containing protein -
H9202_RS21360 (4355989) 4355989..4356165 + 177 WP_001054900.1 hypothetical protein -
H9202_RS25855 (4356230) 4356230..4356325 - 96 WP_000609148.1 DinQ-like type I toxin DqlB -
H9202_RS21370 (4356770) 4356770..4357738 + 969 WP_000654811.1 IS5 family transposase IS903B Transposase
H9202_RS21375 (4357891) 4357891..4358142 + 252 WP_001291964.1 hypothetical protein -
H9202_RS21380 (4358214) 4358214..4358366 - 153 WP_001387489.1 Hok/Gef family protein -
H9202_RS21385 (4358993) 4358993..4359772 + 780 WP_275450201.1 protein FinQ -
H9202_RS21390 (4360079) 4360079..4361287 + 1209 WP_001703845.1 IncI1-type conjugal transfer protein TrbA -
H9202_RS21395 (4361306) 4361306..4362376 + 1071 WP_012783932.1 IncI1-type conjugal transfer protein TrbB -
H9202_RS21400 (4362369) 4362369..4364660 + 2292 WP_012783931.1 F-type conjugative transfer protein TrbC -
H9202_RS21405 (4364697) 4364697..4367396 - 2700 WP_012783930.1 IncI1-type relaxase NikB -
H9202_RS21410 (4367407) 4367407..4367739 - 333 WP_001283947.1 IncI1-type relaxosome accessory protein NikA -
H9202_RS21415 (4367973) 4367973..4368308 + 336 WP_000157082.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
H9202_RS21420 (4368394) 4368394..4369242 - 849 WP_012783929.1 DUF4942 domain-containing protein -
H9202_RS21425 (4369822) 4369822..4370073 + 252 WP_000148285.1 helix-turn-helix transcriptional regulator -
H9202_RS21430 (4370104) 4370104..4370310 - 207 WP_000150314.1 hypothetical protein VF
H9202_RS21435 (4370372) 4370372..4371274 - 903 WP_023150544.1 hypothetical protein VF
H9202_RS21440 (4371271) 4371271..4371660 - 390 WP_000833767.1 hypothetical protein -
H9202_RS21445 (4371837) 4371837..4372103 - 267 WP_000804663.1 hypothetical protein -
H9202_RS21450 (4372197) 4372197..4372631 - 435 WP_000218858.1 hypothetical protein -
H9202_RS21455 (4373360) 4373360..4373860 - 501 WP_000117626.1 antirestriction protein ArdA -
H9202_RS21460 (4374322) 4374322..4374918 - 597 WP_000977995.1 hypothetical protein -
H9202_RS21465 (4374915) 4374915..4375634 - 720 WP_012783927.1 plasmid SOS inhibition protein A -
H9202_RS21470 (4375631) 4375631..4376065 - 435 WP_001402001.1 conjugation system SOS inhibitor PsiB -
H9202_RS21475 (4376118) 4376118..4378076 - 1959 WP_063267868.1 ParB/RepB/Spo0J family partition protein -
H9202_RS21480 (4378135) 4378135..4378368 - 234 WP_015508350.1 DUF905 domain-containing protein -
H9202_RS21485 (4378371) 4378371..4378952 - 582 WP_277626151.1 single-stranded DNA-binding protein -
H9202_RS21490 (4379336) 4379336..4379599 - 264 WP_158213465.1 hypothetical protein -
H9202_RS21495 (4379737) 4379737..4379928 - 192 WP_001027516.1 hypothetical protein -
H9202_RS21500 (4379925) 4379925..4380347 - 423 WP_000271703.1 DUF1380 family protein -
H9202_RS21505 (4380394) 4380394..4380819 - 426 WP_001198889.1 antirestriction protein -
H9202_RS21510 (4381232) 4381232..4382002 - 771 WP_012783922.1 hypothetical protein -
H9202_RS21515 (4382047) 4382047..4382565 - 519 WP_223350510.1 DUF1380 family protein -
H9202_RS21520 (4382495) 4382495..4382716 - 222 WP_001104873.1 hypothetical protein -
H9202_RS21525 (4382717) 4382717..4383400 - 684 WP_000086127.1 DNA methylase -
H9202_RS21530 (4383476) 4383476..4383787 - 312 WP_033863049.1 hypothetical protein -
H9202_RS21535 (4383791) 4383791..4384213 - 423 WP_000774832.1 plasmid partitioning/stability family protein -
H9202_RS21540 (4384216) 4384216..4385196 - 981 WP_012783921.1 plasmid segregation protein ParM -
H9202_RS21545 (4385534) 4385534..4385869 + 336 WP_001340323.1 hypothetical protein -
H9202_RS21550 (4385874) 4385874..4385960 - 87 Protein_4211 hypothetical protein -
H9202_RS21555 (4385964) 4385964..4386866 - 903 WP_001739825.1 DUF1281 domain-containing protein -
H9202_RS21560 (4387284) 4387284..4387532 + 249 WP_000618110.1 DinI-like family protein -
H9202_RS21565 (4387529) 4387529..4387966 + 438 WP_000109071.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
H9202_RS21570 (4387966) 4387966..4389237 + 1272 WP_001703910.1 Y-family DNA polymerase -
H9202_RS21575 (4389433) 4389433..4390059 + 627 WP_000587689.1 ParA family plasmid-partitioning AAA ATPase -
H9202_RS21580 (4390056) 4390056..4390358 + 303 WP_001245884.1 hypothetical protein -
H9202_RS21585 (4390897) 4390897..4392291 - 1395 WP_241408364.1 protein YagA -
H9202_RS21590 (4392234) 4392234..4392578 + 345 Protein_4219 WbuC family cupin fold metalloprotein -
H9202_RS21595 (4392625) 4392625..4393500 - 876 WP_015387340.1 hypothetical protein ARG
H9202_RS21600 (4393756) 4393756..4395018 - 1263 WP_000608644.1 IS1380 family transposase ISEcp1 Transposase
H9202_RS21605 (4395439) 4395439..4396209 + 771 WP_029402187.1 threonine/serine exporter ThrE family protein -
H9202_RS21610 (4396200) 4396200..4396673 + 474 WP_000538188.1 threonine/serine exporter -
H9202_RS21615 (4396780) 4396780..4397319 + 540 WP_000098816.1 primosomal protein DnaT -
H9202_RS21620 (4397322) 4397322..4398059 + 738 WP_000799911.1 IS21 family transposase ISSme2 Transposase
H9202_RS21625 (4398108) 4398108..4398602 + 495 WP_001308243.1 DUF2501 domain-containing protein YjjA -
H9202_RS21630 (4398856) 4398856..4401147 + 2292 WP_001292653.1 phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase -
H9202_RS21635 (4401286) 4401286..4402308 - 1023 WP_000106030.1 L-galactonate oxidoreductase -
H9202_RS21640 (4402447) 4402447..4403361 + 915 WP_000091569.1 GntR family transcriptional regulator -
H9202_RS21645 (4403576) 4403576..4404937 + 1362 WP_000410129.1 MFS transporter -
H9202_RS21650 (4404986) 4404986..4406650 - 1665 WP_000919567.1 hypothetical protein VF
H9202_RS21655 (4406769) 4406769..4407215 - 447 WP_000543915.1 homoprotocatechuate degradation operon regulator HpaR -
H9202_RS21660 (4407487) 4407487..4408776 + 1290 WP_000679092.1 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase -
H9202_RS21665 (4408773) 4408773..4410239 + 1467 WP_000757512.1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase -
H9202_RS21670 (4410241) 4410241..4411092 + 852 WP_000516990.1 3,4-dihydroxyphenylacetate 2,3-dioxygenase -
H9202_RS21675 (4411102) 4411102..4411482 + 381 WP_001119864.1 5-carboxymethyl-2-hydroxymuconate Delta-isomerase -
H9202_RS21680 (4411593) 4411593..4412396 + 804 WP_000459750.1 2-oxo-hepta-3-ene-1,7-dioic acid hydratase -
H9202_RS21685 (4412407) 4412407..4413195 + 789 WP_000431705.1 4-hydroxy-2-oxoheptanedioate aldolase -
H9202_RS21690 (4413370) 4413370..4414746 + 1377 WP_001285769.1 4-hydroxyphenylacetate permease -
H9202_RS21695 (4414756) 4414756..4415646 + 891 WP_000332891.1 4-hydroxyphenylacetate catabolism regulatory protein HpaA -
H9202_RS21700 (4415897) 4415897..4417459 + 1563 WP_029402184.1 hypothetical protein VF
H9202_RS21705 (4417477) 4417477..4417989 + 513 WP_001175455.1 4-hydroxyphenylacetate 3-monooxygenase reductase subunit -
H9202_RS21710 (4418379) 4418379..4420529 + 2151 WP_001298933.1 pyruvate/proton symporter BtsT -
H9202_RS21715 (4420660) 4420660..4420863 + 204 WP_000467859.1 YbdD/YjiX family protein -
H9202_RS21720 (4420874) 4420874..4421830 + 957 WP_001295525.1 GTPase -
H9202_RS21725 (4421864) 4421864..4422166 - 303 WP_019842999.1 BrnA antitoxin family protein Antitoxin Detail
H9202_RS21730 (4422153) 4422153..4422440 - 288 WP_001131965.1 BrnT family toxin Toxin Detail
H9202_RS21735 (4422637) 4422637..4423803 + 1167 WP_000800825.1 restriction endonuclease -
H9202_RS21740 (4423867) 4423867..4425486 + 1620 WP_001029743.1 class I SAM-dependent DNA methyltransferase -
H9202_RS21750 (4426606) 4426606..4429869 + 3264 WP_000058885.1 HsdR family type I site-specific deoxyribonuclease -
H9202_RS21755 (4430084) 4430084..4430422 + 339 WP_000132624.1 endoribonuclease SymE -
H9202_RS21760 (4430510) 4430510..4430662 - 153 WP_229018381.1 cytoplasmic protein -
H9202_RS21765 (4430805) 4430805..4432217 + 1413 WP_000199313.1 PLP-dependent aminotransferase family protein -
H9202_RS21770 (4432460) 4432460..4433404 - 945 WP_000181173.1 hypothetical protein VF
H9202_RS21775 (4433872) 4433872..4435104 + 1233 WP_100729270.1 multidrug efflux MFS transporter MdtM -
H9202_RS21780 (4435145) 4435145..4436425 + 1281 WP_001037392.1 DUF445 domain-containing protein -
H9202_RS21785 (4436541) 4436541..4437692 + 1152 WP_001307557.1 double-cubane-cluster-containing anaerobic reductase -
H9202_RS21790 (4437702) 4437702..4438469 + 768 WP_000222495.1 putative 2-hydroxyacyl-CoA dehydratase activator YjiL -
H9202_RS21795 (4438466) 4438466..4438723 + 258 WP_000657676.1 DUF3343 domain-containing protein -
H9202_RS21800 (4438788) 4438788..4439648 + 861 WP_001298932.1 YjiK family protein -
H9202_RS21805 (4439716) 4439716..4440894 + 1179 WP_001141192.1 MFS transporter -
H9202_RS21810 (4440907) 4440907..4441461 - 555 WP_001151854.1 RNA 2'-phosphotransferase -
H9202_RS21815 (4441711) 4441711..4442394 + 684 WP_072649507.1 nucleoside recognition domain-containing protein -
H9202_RS21820 (4442391) 4442391..4442852 + 462 WP_000211971.1 YjiG family protein -
H9202_RS21825 (4442865) 4442865..4444037 + 1173 WP_000568406.1 beta-aspartyl-peptidase -
H9202_RS21830 (4444102) 4444102..4445013 + 912 WP_000340764.1 hypochlorite stress DNA-binding transcriptional regulator HypT -
H9202_RS21835 (4445006) 4445006..4445398 - 393 WP_000986215.1 anti-adapter protein IraD -
H9202_RS21840 (4445395) 4445395..4445478 - 84 WP_120795393.1 iraD leader peptide IdlP -
H9202_RS25860 (4445594) 4445594..4445737 - 144 WP_001329085.1 protein YtiD -
H9202_RS21845 (4446071) 4446071..4446901 + 831 WP_000062558.1 DUF2686 family protein -
H9202_RS21850 (4447042) 4447042..4447815 - 774 WP_000833679.1 Uxu operon transcriptional regulator -
H9202_RS21855 (4448030) 4448030..4449490 - 1461 WP_029402182.1 fructuronate reductase -
H9202_RS21860 (4449571) 4449571..4450755 - 1185 WP_000438591.1 mannonate dehydratase -
H9202_RS21865 (4451095) 4451095..4452438 + 1344 WP_000558251.1 gluconate permease GntP -
H9202_RS21870 (4452681) 4452681..4453583 - 903 WP_000832227.1 hypothetical protein VF
H9202_RS21875 (4453603) 4453603..4454106 - 504 WP_000870592.1 hypothetical protein VF
H9202_RS21880 (4454119) 4454119..4454649 - 531 WP_042630973.1 hypothetical protein VF
H9202_RS21885 (4454659) 4454659..4457295 - 2637 WP_000120942.1 hypothetical protein VF
H9202_RS21890 (4457362) 4457362..4458087 - 726 WP_241408365.1 hypothetical protein VF
H9202_RS21895 (4458124) 4458124..4458663 - 540 WP_000824109.1 hypothetical protein VF
H9202_RS21900 (4458728) 4458728..4459276 - 549 WP_000695561.1 hypothetical protein VF
H9202_RS21905 (4459757) 4459757..4460353 - 597 WP_000044711.1 Tyrosine recombinase XerC VF
H9202_RS21910 (4460831) 4460831..4461433 - 603 WP_000790583.1 Tyrosine recombinase XerC VF
H9202_RS21915 (4462887) 4462887..4463345 + 459 Protein_4285 N-acetylneuraminic acid outer membrane channel NanC -
H9202_RS21925 (4464679) 4464679..4464939 + 261 Protein_4287 N-acetylneuraminic acid outer membrane channel NanC -
H9202_RS21930 (4464959) 4464959..4466065 + 1107 WP_001295733.1 N-acetylneuraminate epimerase -
H9202_RS21935 (4466129) 4466129..4467109 + 981 WP_000991462.1 sialate O-acetylesterase -
H9202_RS21940 (4467219) 4467219..4467424 + 206 Protein_4290 HNH endonuclease -
H9202_RS21945 (4467692) 4467692..4468918 - 1227 Protein_4291 helicase YjhR -
H9202_RS21950 (4468996) 4468996..4469295 + 300 WP_001332034.1 GNAT family N-acetyltransferase -
H9202_RS21955 (4469672) 4469672..4469929 + 258 WP_001054379.1 YjhX family toxin -
H9202_RS21960 (4469941) 4469941..4470488 + 548 Protein_4294 N-acetyltransferase -
H9202_RS21965 (4470544) 4470544..4471290 + 747 WP_000354249.1 class I SAM-dependent methyltransferase -
H9202_RS21970 (4471460) 4471460..4471678 + 219 WP_001348444.1 hypothetical protein -
H9202_RS21975 (4471716) 4471716..4471832 + 117 Protein_4297 VOC family protein -
H9202_RS21980 (4472077) 4472077..4473198 + 1122 WP_000010833.1 M42 family metallopeptidase -
H9202_RS21985 (4473195) 4473195..4473473 + 279 WP_000722973.1 PTS sugar transporter subunit IIB SgcB -
H9202_RS21990 (4473485) 4473485..4474798 + 1314 WP_029402181.1 PTS sugar transporter subunit IIC SgcC -
H9202_RS21995 (4474811) 4474811..4475617 + 807 WP_000118626.1 BtpA family protein SgcQ -
H9202_RS22000 (4475748) 4475748..4476179 + 432 WP_000606405.1 SgcA family PTS sugar transporter subunit IIA -
H9202_RS22005 (4476191) 4476191..4476823 + 633 WP_000600624.1 ribulose-phosphate 3 epimerase family protein -
H9202_RS22010 (4476840) 4476840..4477622 + 783 WP_000082779.1 DeoR/GlpR family DNA-binding transcription regulator -
H9202_RS22015 (4477925) 4477925..4478713 + 789 WP_000251800.1 IclR family transcriptional regulator -
H9202_RS22020 (4478718) 4478718..4479623 + 906 WP_000714563.1 dihydrodipicolinate synthase family protein -
H9202_RS22025 (4479634) 4479634..4481601 + 1968 WP_000116325.1 xylonate dehydratase YjhG -
H9202_RS22030 (4481708) 4481708..4483057 + 1350 WP_001128363.1 GntP family permease -
H9202_RS22035 (4483404) 4483404..4484390 + 987 WP_000373366.1 sugar-binding transcriptional regulator -
H9202_RS22040 (4484431) 4484431..4485435 - 1005 WP_000471144.1 GRP family sugar transporter -
H9202_RS22045 (4485539) 4485539..4486180 - 642 WP_000439686.1 L-fuculose-phosphate aldolase -
H9202_RS22050 (4486211) 4486211..4487326 - 1116 WP_001022015.1 S-methyl-5-thioribose-1-phosphate isomerase -
H9202_RS22055 (4487336) 4487336..4488595 - 1260 WP_000132325.1 S-methyl-5-thioribose kinase -
H9202_RS22060 (4489395) 4489395..4490332 + 938 Protein_4314 glycosyltransferase -
H9202_RS22065 (4490753) 4490753..4492828 + 2076 WP_000366620.1 AAA family ATPase -
H9202_RS22070 (4492821) 4492821..4494107 + 1287 WP_000504875.1 McrC family protein -
H9202_RS22075 (4494388) 4494388..4495954 + 1567 Protein_4317 Alw26I/Eco31I/Esp3I family type II restriction endonuclease -
H9202_RS22080 (4495967) 4495967..4497157 - 1191 WP_001295727.1 DNA (cytosine-5-)-methyltransferase -
H9202_RS22085 (4497150) 4497150..4498772 - 1623 WP_001295726.1 Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase -
H9202_RS22090 (4499242) 4499242..4500783 - 1542 WP_001298859.1 IS21 family transposase ISEc12 Transposase
H9202_RS22095 (4501377) 4501377..4501553 - 177 Protein_4321 IS3 family transposase ISSen1 Transposase
H9202_RS22100 (4501920) 4501920..4502069 - 150 Protein_4322 hypothetical protein -
H9202_RS22105 (4502175) 4502175..4502351 - 177 WP_000839286.1 DUF957 domain-containing protein -
H9202_RS22110 (4502368) 4502368..4502856 - 489 WP_000761690.1 DUF5983 family protein -
H9202_RS22115 (4502853) 4502853..4503230 - 378 WP_000854759.1 TA system toxin CbtA family protein Toxin Detail
H9202_RS22120 (4503320) 4503320..4503688 - 369 WP_001295723.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
H9202_RS22125 (4503851) 4503851..4504072 - 222 WP_000692345.1 DUF987 domain-containing protein -
H9202_RS22130 (4504135) 4504135..4504611 - 477 WP_001186775.1 RadC family protein -
H9202_RS22135 (4504627) 4504627..4505100 - 474 WP_000855059.1 antirestriction protein -
H9202_RS22140 (4505440) 4505440..4506258 - 819 WP_042631095.1 DUF932 domain-containing protein -
H9202_RS22145 (4506376) 4506376..4506571 - 196 Protein_4331 DUF905 family protein -
H9202_RS22150 (4506642) 4506642..4506833 - 192 Protein_4332 autotransporter domain-containing protein -
H9202_RS22155 (4506917) 4506917..4507939 + 1023 WP_000255946.1 IS21 family transposase IS100kyp Transposase
H9202_RS22160 (4507936) 4507936..4508718 + 783 WP_001317493.1 IS21-like element IS100kyp family helper ATPase IstB -
H9202_RS22165 (4508784) 4508784..4509638 - 855 Protein_4335 autotransporter domain-containing protein -
H9202_RS22170 (4510674) 4510674..4511276 - 603 WP_000813435.1 hypothetical protein -
H9202_RS22175 (4511372) 4511372..4511578 - 207 WP_000211308.1 helix-turn-helix domain-containing protein -
H9202_RS22180 (4512352) 4512352..4512501 + 150 WP_071526287.1 Hha/YmoA family nucleoid-associated regulatory protein -
H9202_RS22185 (4512834) 4512834..4513031 - 198 WP_001547002.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance