MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88680 bp
Accession: NZ_CP060903 Location: 1..88680 Organism: Escherichia coli strain EC20 Replicon: plasmid pEC20-2
Accession: NZ_CP060903 Location: 1..88680 Organism: Escherichia coli strain EC20 Replicon: plasmid pEC20-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9205_RS23520 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| H9205_RS23525 (1263) | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| H9205_RS23530 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| H9205_RS23535 (2679) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| H9205_RS23540 (4074) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| H9205_RS23545 (4695) | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| H9205_RS23550 (5504) | 5504..5928 | - | 425 | Protein_6 | transposase | - |
| H9205_RS23555 (6210) | 6210..8180 | + | 1971 | WP_001496335.1 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor | - |
| H9205_RS23560 (8187) | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| H9205_RS23565 (9041) | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase | - |
| H9205_RS23570 (9717) | 9717..10499 | - | 783 | WP_001317493.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| H9205_RS23575 (10496) | 10496..11518 | - | 1023 | WP_000255956.1 | IS21-like element IS100 family transposase | - |
| H9205_RS23580 (11604) | 11604..12549 | - | 946 | Protein_12 | IS66 family transposase | - |
| H9205_RS23585 (12598) | 12598..12972 | - | 375 | WP_024193849.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| H9205_RS23590 (12997) | 12997..13701 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| H9205_RS23595 (13755) | 13755..14195 | - | 441 | Protein_15 | CatB-related O-acetyltransferase | - |
| H9205_RS23600 (14333) | 14333..15163 | - | 831 | WP_001334766.1 | oxacillin-hydrolyzing class D beta-lactamase OXA-1 | - |
| H9205_RS23605 (15294) | 15294..15848 | - | 555 | WP_063840321.1 | fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5 | - |
| H9205_RS23610 (15992) | 15992..16696 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| H9205_RS23615 (16762) | 16762..18276 | + | 1515 | Protein_19 | Tn3-like element TnAs1 family transposase | - |
| H9205_RS23620 (18318) | 18318..18560 | + | 243 | WP_032140899.1 | hypothetical protein | - |
| H9205_RS23625 (18592) | 18592..19242 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| H9205_RS23630 (19348) | 19348..20547 | + | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| H9205_RS23635 (20579) | 20579..21463 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| H9205_RS23640 (21601) | 21601..21993 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| H9205_RS23645 (21997) | 21997..22746 | + | 750 | Protein_25 | Tn3 family transposase | - |
| H9205_RS23650 (22770) | 22770..23375 | - | 606 | WP_000509965.1 | recombinase family protein | - |
| H9205_RS23655 (23470) | 23470..26367 | + | 2898 | WP_001553819.1 | Tn3-like element Tn5403 family transposase | - |
| H9205_RS23660 (26504) | 26504..26905 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| H9205_RS23665 (26838) | 26838..27095 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| H9205_RS23670 (27188) | 27188..27841 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| H9205_RS23675 (28780) | 28780..29637 | - | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
| H9205_RS23680 (29630) | 29630..29704 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| H9205_RS23685 (29939) | 29939..30196 | - | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| H9205_RS23690 (30601) | 30601..31623 | + | 1023 | WP_000156883.1 | IS110 family transposase | - |
| H9205_RS23695 (32095) | 32095..32448 | + | 354 | WP_000005489.1 | hypothetical protein | - |
| H9205_RS23700 (32861) | 32861..33439 | - | 579 | WP_032152936.1 | DUF2726 domain-containing protein | - |
| H9205_RS23705 (33472) | 33472..34169 | + | 698 | WP_223230354.1 | IS1-like element IS1A family transposase | - |
| H9205_RS23710 (34284) | 34284..34640 | + | 357 | WP_000229735.1 | transposase | - |
| H9205_RS23715 (34637) | 34637..34987 | + | 351 | WP_000624725.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| H9205_RS23720 (35018) | 35018..35239 | + | 222 | WP_000080227.1 | hypothetical protein | - |
| H9205_RS23725 (35191) | 35191..35532 | + | 342 | Protein_41 | transposase | - |
| H9205_RS23730 (35596) | 35596..36075 | - | 480 | WP_001496175.1 | ArgR family transcriptional regulator | - |
| H9205_RS23735 (36156) | 36156..37559 | - | 1404 | WP_000514417.1 | YfcC family protein | - |
| H9205_RS23740 (37607) | 37607..38611 | - | 1005 | WP_000154545.1 | ornithine carbamoyltransferase | - |
| H9205_RS23745 (38696) | 38696..39607 | - | 912 | WP_000440183.1 | carbamate kinase | - |
| H9205_RS23750 (39618) | 39618..40838 | - | 1221 | WP_000410951.1 | arginine deiminase | - |
| H9205_RS23755 (41545) | 41545..42159 | + | 615 | Protein_47 | VENN motif pre-toxin domain-containing protein | - |
| H9205_RS23760 (42159) | 42159..42605 | - | 447 | Protein_48 | plasmid replication initiator RepA | - |
| H9205_RS23765 (42598) | 42598..42672 | - | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
| H9205_RS23770 (42908) | 42908..43165 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| H9205_RS23775 (43449) | 43449..43598 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (43642) | 43642..43703 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (43642) | 43642..43703 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (43642) | 43642..43703 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (43642) | 43642..43703 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| H9205_RS23780 (43842) | 43842..44024 | - | 183 | WP_000968309.1 | hypothetical protein | - |
| H9205_RS23785 (44125) | 44125..44741 | + | 617 | Protein_53 | IS1-like element IS1A family transposase | - |
| H9205_RS23790 (44779) | 44779..46350 | - | 1572 | WP_023149734.1 | IS66-like element ISCro1 family transposase | - |
| H9205_RS23795 (46370) | 46370..46717 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| H9205_RS23800 (46717) | 46717..47394 | - | 678 | WP_001339397.1 | IS66-like element accessory protein TnpA | - |
| H9205_RS23805 (47449) | 47449..47538 | + | 90 | Protein_57 | IS1 family transposase | - |
| H9205_RS23810 (47839) | 47839..48051 | - | 213 | WP_005012601.1 | hypothetical protein | - |
| H9205_RS23815 (48185) | 48185..48745 | - | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| H9205_RS23820 (48800) | 48800..49546 | - | 747 | WP_023149624.1 | conjugal transfer pilus acetylase TraX | - |
| H9205_RS23825 (49566) | 49566..51806 | - | 2241 | Protein_61 | conjugative transfer relaxase/helicase TraI | - |
| H9205_RS23830 (51903) | 51903..53083 | - | 1181 | Protein_62 | hydrolase | - |
| H9205_RS23835 (53135) | 53135..53365 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| H9205_RS23840 (53877) | 53877..54125 | + | 249 | WP_071781657.1 | hypothetical protein | - |
| H9205_RS23845 (54397) | 54397..54588 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| H9205_RS23850 (54585) | 54585..55007 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| H9205_RS23855 (55054) | 55054..55479 | - | 426 | WP_001546490.1 | antirestriction protein | - |
| H9205_RS23860 (55893) | 55893..56663 | - | 771 | WP_001006251.1 | hypothetical protein | - |
| H9205_RS23865 (56708) | 56708..57226 | - | 519 | WP_223349485.1 | DUF1380 family protein | - |
| H9205_RS23870 (57156) | 57156..57377 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| H9205_RS23875 (57378) | 57378..58061 | - | 684 | WP_032181561.1 | DNA methylase | - |
| H9205_RS23880 (58138) | 58138..58449 | - | 312 | WP_012615291.1 | hypothetical protein | - |
| H9205_RS23885 (58446) | 58446..59348 | - | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| H9205_RS23890 (60086) | 60086..61057 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| H9205_RS23895 (61057) | 61057..62223 | - | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| H9205_RS23900 (62811) | 62811..63566 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| H9205_RS23905 (64288) | 64288..65094 | - | 807 | WP_000016970.1 | site-specific integrase | - |
| H9205_RS23910 (65095) | 65095..65400 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| H9205_RS23915 (65402) | 65402..65620 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| H9205_RS23920 (66180) | 66180..66410 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| H9205_RS23925 (66407) | 66407..66823 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H9205_RS23930 (66898) | 66898..68463 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| H9205_RS23935 (68448) | 68448..69470 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| H9205_RS23945 (70947) | 70947..73148 | - | 2202 | WP_000973519.1 | ferric aerobactin receptor IutA | - |
| H9205_RS23950 (73174) | 73174..74507 | - | 1334 | Protein_86 | NADPH-dependent L-lysine N(6)-monooxygenase IucD | - |
| H9205_RS23955 (74504) | 74504..76246 | - | 1743 | WP_001015721.1 | NIS family aerobactin synthetase IucC | - |
| H9205_RS23960 (76246) | 76246..77193 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase IucB | - |
| H9205_RS23965 (77194) | 77194..78918 | - | 1725 | WP_000602863.1 | NIS family aerobactin synthetase IucA | - |
| H9205_RS23970 (79054) | 79054..80247 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| H9205_RS23975 (80627) | 80627..81007 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| H9205_RS23980 (81348) | 81348..81761 | - | 414 | Protein_92 | phosphopyruvate hydratase | - |
| H9205_RS23985 (81759) | 81759..82016 | + | 258 | Protein_93 | Tn3 family transposase | - |
| H9205_RS23990 (82250) | 82250..83107 | - | 858 | WP_000968139.1 | iron/manganese ABC transporter permease subunit SitD | - |
| H9205_RS23995 (83104) | 83104..83961 | - | 858 | WP_001101723.1 | iron/manganese ABC transporter permease subunit SitC | - |
| H9205_RS24000 (83958) | 83958..84785 | - | 828 | WP_000983710.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| H9205_RS24005 (84785) | 84785..85699 | - | 915 | WP_000949005.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| H9205_RS24010 (86055) | 86055..86752 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| H9205_RS24015 (86932) | 86932..87445 | - | 514 | Protein_99 | DUF4113 domain-containing protein | - |
| H9205_RS24020 (87506) | 87506..87610 | - | 105 | Protein_100 | AAA family ATPase | - |
| H9205_RS24025 (87612) | 87612..87935 | - | 324 | Protein_101 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|