MGE detailed information
MGE type: Conjugative plasmid MGE length: 79683 bp
Accession: NZ_CP060882 Location: 1..79683 Organism: Escherichia coli strain EC26 Replicon: plasmid pEC26-3
Accession: NZ_CP060882 Location: 1..79683 Organism: Escherichia coli strain EC26 Replicon: plasmid pEC26-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9209_RS24005 (1) | 1..858 | + | 858 | WP_000130647.1 | incFII family plasmid replication initiator RepA | - |
| H9209_RS24010 (1796) | 1796..2449 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| H9209_RS24015 (2542) | 2542..2799 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| H9209_RS24020 (2732) | 2732..3133 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| H9209_RS24025 (3382) | 3382..3797 | + | 416 | Protein_4 | IS1 family transposase IS1R | Transposase |
| H9209_RS24030 (3833) | 3833..4378 | - | 546 | Protein_5 | Tn3 family transposase TnpA_Tn3 | Transposase |
| H9209_RS24035 (4444) | 4444..5148 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9209_RS24040 (5173) | 5173..5697 | + | 525 | WP_050195267.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| H9209_RS24045 (5774) | 5774..7165 | + | 1392 | WP_000085084.1 | SIR2 family protein | - |
| H9209_RS24050 (7162) | 7162..9234 | + | 2073 | WP_001084041.1 | DUF87 domain-containing protein | - |
| H9209_RS24055 (9424) | 9424..9663 | - | 240 | WP_000371884.1 | hypothetical protein | - |
| H9209_RS24060 (9937) | 9937..10428 | + | 492 | WP_000528930.1 | HEPN family nuclease | - |
| H9209_RS24065 (10440) | 10440..11198 | + | 759 | WP_000494510.1 | hypothetical protein | - |
| H9209_RS24070 (11489) | 11489..13012 | + | 1524 | WP_000921251.1 | hypothetical protein | - |
| H9209_RS24075 (13047) | 13047..14171 | + | 1125 | WP_000386705.1 | DUF4238 domain-containing protein | - |
| H9209_RS24080 (14171) | 14171..14461 | + | 291 | WP_000648897.1 | hypothetical protein | - |
| H9209_RS24085 (15278) | 15278..15496 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| H9209_RS24090 (15498) | 15498..15803 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| H9209_RS24095 (15804) | 15804..16613 | + | 810 | WP_000016963.1 | site-specific integrase | - |
| H9209_RS24100 (16785) | 16785..17138 | + | 354 | WP_000864813.1 | colicin M immunity protein | - |
| H9209_RS24105 (17188) | 17188..17757 | - | 570 | Protein_20 | lipid II-degrading bacteriocin colicin M | - |
| H9209_RS24110 (17814) | 17814..18511 | + | 698 | WP_240763292.1 | IS1 family transposase | - |
| H9209_RS24115 (18669) | 18669..19541 | - | 873 | WP_000794337.1 | hypothetical protein | - |
| H9209_RS24120 (19772) | 19772..20469 | + | 698 | WP_223200906.1 | IS1 family transposase IS1R | Transposase |
| H9209_RS24125 (20485) | 20485..21075 | - | 591 | Protein_24 | colicin-like bacteriocin tRNase domain-containing protein | - |
| H9209_RS24130 (21255) | 21255..21687 | + | 433 | Protein_25 | tyrosine-type recombinase/integrase | - |
| H9209_RS24135 (21879) | 21879..22154 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| H9209_RS24140 (22148) | 22148..22792 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| H9209_RS24145 (23021) | 23021..23992 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| H9209_RS24150 (23997) | 23997..24389 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| H9209_RS24155 (24394) | 24394..25665 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| H9209_RS24160 (25665) | 25665..26102 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H9209_RS24165 (26099) | 26099..26347 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| H9209_RS24170 (26765) | 26765..27667 | + | 903 | WP_001302618.1 | DUF1281 domain-containing protein | - |
| H9209_RS24175 (27664) | 27664..27975 | + | 312 | WP_032317461.1 | hypothetical protein | - |
| H9209_RS24180 (28052) | 28052..28735 | + | 684 | WP_113421878.1 | DNA methylase | - |
| H9209_RS24185 (28736) | 28736..28957 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| H9209_RS24190 (28938) | 28938..29405 | + | 468 | WP_023156300.1 | DUF1380 family protein | - |
| H9209_RS24195 (29450) | 29450..30220 | + | 771 | WP_001006221.1 | hypothetical protein | - |
| H9209_RS24200 (30638) | 30638..31063 | + | 426 | WP_001198872.1 | antirestriction protein | - |
| H9209_RS24205 (31110) | 31110..31532 | + | 423 | WP_000271726.1 | DUF1380 family protein | - |
| H9209_RS24210 (31529) | 31529..31720 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| H9209_RS24215 (31992) | 31992..32240 | - | 249 | WP_077879799.1 | hypothetical protein | - |
| H9209_RS24220 (32758) | 32758..32988 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| H9209_RS24225 (33040) | 33040..34401 | + | 1362 | WP_000170675.1 | DUF3560 domain-containing protein | - |
| H9209_RS24230 (34449) | 34449..35012 | + | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| H9209_RS24235 (35284) | 35284..35535 | + | 252 | WP_077879800.1 | hypothetical protein | - |
| H9209_RS24240 (35680) | 35680..35886 | + | 207 | WP_015059635.1 | hypothetical protein | - |
| H9209_RS24245 (35912) | 35912..36364 | + | 453 | WP_063072992.1 | single-stranded DNA-binding protein | - |
| H9209_RS24250 (36426) | 36426..36659 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| H9209_RS24255 (36724) | 36724..38682 | + | 1959 | WP_063072993.1 | ParB/RepB/Spo0J family partition protein | - |
| H9209_RS24260 (38737) | 38737..39171 | + | 435 | WP_000845907.1 | conjugation system SOS inhibitor PsiB | - |
| H9209_RS24265 (39168) | 39168..39930 | + | 763 | Protein_52 | plasmid SOS inhibition protein A | - |
| H9209_RS24270 (39899) | 39899..40087 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - (39899) | 39899..40123 | + | 225 | NuclAT_0 | - | - |
| - (39899) | 39899..40123 | + | 225 | NuclAT_0 | - | - |
| - (39899) | 39899..40123 | + | 225 | NuclAT_0 | - | - |
| - (39899) | 39899..40123 | + | 225 | NuclAT_0 | - | - |
| H9209_RS24275 (40109) | 40109..40258 | + | 150 | Protein_54 | plasmid maintenance protein Mok | - |
| H9209_RS24280 (40200) | 40200..40325 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| H9209_RS24285 (40545) | 40545..40775 | + | 231 | WP_071845785.1 | hypothetical protein | - |
| H9209_RS24290 (40773) | 40773..40946 | - | 174 | Protein_57 | hypothetical protein | - |
| H9209_RS24295 (41016) | 41016..41222 | + | 207 | WP_063609967.1 | hypothetical protein | - |
| H9209_RS24300 (41247) | 41247..41534 | + | 288 | WP_063072995.1 | hypothetical protein | - |
| H9209_RS24305 (41653) | 41653..42474 | + | 822 | WP_001241365.1 | DUF932 domain-containing protein | - |
| H9209_RS24310 (42771) | 42771..43361 | - | 591 | WP_222908884.1 | hypothetical protein | VF |
| H9209_RS24315 (43694) | 43694..44077 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| H9209_RS24320 (44264) | 44264..44953 | + | 690 | WP_000283379.1 | conjugal transfer transcriptional regulator TraJ | - |
| H9209_RS24325 (45046) | 45046..45447 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| H9209_RS24330 (45480) | 45480..45845 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| H9209_RS24335 (45860) | 45860..46171 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| H9209_RS24340 (46193) | 46193..46759 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| H9209_RS24345 (46746) | 46746..47474 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| H9209_RS24350 (47474) | 47474..48901 | + | 1428 | WP_000146638.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| H9209_RS24355 (48891) | 48891..49475 | + | 585 | WP_000002795.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| H9209_RS24360 (49462) | 49462..49782 | + | 321 | WP_001057302.1 | conjugal transfer protein TrbD | - |
| H9209_RS24365 (49775) | 49775..50026 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| H9209_RS24370 (50023) | 50023..50538 | + | 516 | WP_000809893.1 | type IV conjugative transfer system lipoprotein TraV | - |
| H9209_RS24375 (50673) | 50673..50894 | + | 222 | WP_072651814.1 | conjugal transfer protein TraR | - |
| H9209_RS24380 (51054) | 51054..53681 | + | 2628 | WP_113421867.1 | type IV secretion system protein TraC | - |
| H9209_RS24385 (53678) | 53678..54064 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| H9209_RS24390 (54061) | 54061..54693 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| H9209_RS24395 (54690) | 54690..55682 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| H9209_RS24400 (55712) | 55712..56017 | + | 306 | WP_000224411.1 | hypothetical protein | - |
| H9209_RS24405 (56026) | 56026..56664 | + | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| H9209_RS24410 (56661) | 56661..58469 | + | 1809 | WP_000821863.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| H9209_RS24415 (58496) | 58496..58753 | + | 258 | WP_000864320.1 | conjugal transfer protein TrbE | - |
| H9209_RS24420 (58746) | 58746..59489 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| H9209_RS24425 (59505) | 59505..59843 | + | 339 | WP_001287905.1 | conjugal transfer protein TrbA | - |
| H9209_RS24430 (59970) | 59970..60254 | + | 285 | WP_001448202.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| H9209_RS24435 (60241) | 60241..60786 | + | 546 | WP_000059824.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| H9209_RS24440 (60716) | 60716..61056 | + | 341 | Protein_87 | P-type conjugative transfer protein TrbJ | - |
| H9209_RS24445 (61037) | 61037..61429 | + | 393 | WP_000660703.1 | F-type conjugal transfer protein TrbF | - |
| H9209_RS24450 (61416) | 61416..62789 | + | 1374 | WP_112901602.1 | conjugal transfer pilus assembly protein TraH | - |
| H9209_RS24455 (62786) | 62786..65605 | + | 2820 | WP_113421866.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| H9209_RS24460 (65624) | 65624..66121 | + | 498 | WP_000605861.1 | hypothetical protein | - |
| H9209_RS24465 (66153) | 66153..66884 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| H9209_RS24470 (67137) | 67137..69344 | + | 2208 | WP_001462104.1 | type IV conjugative transfer system coupling protein TraD | - |
| H9209_RS24475 (69344) | 69344..74614 | + | 5271 | WP_000986934.1 | Multifunctional conjugation protein TraI | Relaxase |
| H9209_RS24480 (74634) | 74634..75380 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| H9209_RS24485 (75439) | 75439..76299 | + | 861 | WP_000704528.1 | putative protein YcjY | VF |
| H9209_RS24490 (76402) | 76402..76962 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| H9209_RS24495 (77091) | 77091..77303 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| H9209_RS24500 (77548) | 77548..78009 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| H9209_RS24505 (78055) | 78055..78264 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| H9209_RS24510 (78302) | 78302..78892 | + | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| H9209_RS24515 (79132) | 79132..79392 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| H9209_RS24520 (79486) | 79486..79671 | + | 186 | WP_012615301.1 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|