MGE detailed information
MGE type: Genomic_island MGE length: 10611 bp
Accession: NZ_CP060678 Location: 4028985..4039595 Organism: Salmonella enterica strain 190610_1 Replicon: chromosome
Accession: NZ_CP060678 Location: 4028985..4039595 Organism: Salmonella enterica strain 190610_1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q82_RS19545 (4024925) | 4024925..4025380 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| H9Q82_RS19550 (4025522) | 4025522..4026751 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| H9Q82_RS19555 (4026782) | 4026782..4027054 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| H9Q82_RS19560 (4027176) | 4027176..4028030 | + | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| H9Q82_RS19565 (4028240) | 4028240..4028998 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| H9Q82_RS19570 (4028985) | 4028985..4029497 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| H9Q82_RS19575 (4029641) | 4029641..4030717 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| H9Q82_RS19580 (4030714) | 4030714..4031457 | - | 744 | WP_000798504.1 | hypothetical protein | VF |
| H9Q82_RS19585 (4031498) | 4031498..4033981 | - | 2484 | WP_000705505.1 | hypothetical protein | VF |
| H9Q82_RS19590 (4034101) | 4034101..4034682 | - | 582 | WP_001244651.1 | hypothetical protein | VF |
| H9Q82_RS19595 (4035401) | 4035401..4036033 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| H9Q82_RS19600 (4036080) | 4036080..4036616 | - | 537 | WP_001038502.1 | hypothetical protein | VF |
| H9Q82_RS19605 (4037424) | 4037424..4037822 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| H9Q82_RS19610 (4037822) | 4037822..4038049 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| H9Q82_RS19615 (4038258) | 4038258..4038509 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| H9Q82_RS19620 (4038789) | 4038789..4039595 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| H9Q82_RS19630 (4039880) | 4039880..4040638 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| H9Q82_RS19635 (4040903) | 4040903..4041448 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| H9Q82_RS19640 (4041524) | 4041524..4043041 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.009 |