MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP060676 Location: 3765123..3776478 Organism: Salmonella enterica strain 190704_2 Replicon: chromosome
Accession: NZ_CP060676 Location: 3765123..3776478 Organism: Salmonella enterica strain 190704_2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q83_RS18560 (3760569) | 3760569..3761667 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| H9Q83_RS18565 (3761677) | 3761677..3763194 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| H9Q83_RS18570 (3763270) | 3763270..3763815 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| H9Q83_RS18575 (3764080) | 3764080..3764838 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| H9Q83_RS18585 (3765123) | 3765123..3765929 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| H9Q83_RS18590 (3766209) | 3766209..3766460 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| H9Q83_RS18595 (3766669) | 3766669..3766896 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| H9Q83_RS18600 (3766896) | 3766896..3767294 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| H9Q83_RS18605 (3768102) | 3768102..3768638 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| H9Q83_RS18610 (3768685) | 3768685..3769317 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| H9Q83_RS18615 (3770036) | 3770036..3770617 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| H9Q83_RS18620 (3770737) | 3770737..3773220 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| H9Q83_RS18625 (3773261) | 3773261..3774004 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| H9Q83_RS18630 (3774001) | 3774001..3775077 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| H9Q83_RS18635 (3775221) | 3775221..3775733 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| H9Q83_RS18640 (3775720) | 3775720..3776478 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| H9Q83_RS18645 (3776688) | 3776688..3777542 | - | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| H9Q83_RS18650 (3777664) | 3777664..3777936 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| H9Q83_RS18655 (3777967) | 3777967..3779196 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| H9Q83_RS18660 (3779338) | 3779338..3779793 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| H9Q83_RS18665 (3779897) | 3779897..3780760 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |