MGE detailed information
MGE type: Genomic_island MGE length: 10611 bp
Accession: NZ_CP060672 Location: 4030409..4041019 Organism: Salmonella enterica strain 190729_8 Replicon: chromosome
Accession: NZ_CP060672 Location: 4030409..4041019 Organism: Salmonella enterica strain 190729_8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q85_RS19560 (4026349) | 4026349..4026804 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| H9Q85_RS19565 (4026946) | 4026946..4028175 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| H9Q85_RS19570 (4028206) | 4028206..4028478 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| H9Q85_RS19575 (4028600) | 4028600..4029454 | + | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| H9Q85_RS19580 (4029664) | 4029664..4030422 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| H9Q85_RS19585 (4030409) | 4030409..4030921 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| H9Q85_RS19590 (4031065) | 4031065..4032141 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| H9Q85_RS19595 (4032138) | 4032138..4032881 | - | 744 | WP_000798504.1 | hypothetical protein | VF |
| H9Q85_RS19600 (4032922) | 4032922..4035405 | - | 2484 | WP_000705505.1 | hypothetical protein | VF |
| H9Q85_RS19605 (4035525) | 4035525..4036106 | - | 582 | WP_001244651.1 | hypothetical protein | VF |
| H9Q85_RS19610 (4036825) | 4036825..4037457 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| H9Q85_RS19615 (4037504) | 4037504..4038040 | - | 537 | WP_001038502.1 | hypothetical protein | VF |
| H9Q85_RS19620 (4038848) | 4038848..4039246 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| H9Q85_RS19625 (4039246) | 4039246..4039473 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| H9Q85_RS19630 (4039682) | 4039682..4039933 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| H9Q85_RS19635 (4040213) | 4040213..4041019 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| H9Q85_RS19645 (4041304) | 4041304..4042062 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| H9Q85_RS19650 (4042327) | 4042327..4042872 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| H9Q85_RS19655 (4042948) | 4042948..4044465 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.009 |