MGE detailed information
MGE type: Genomic_island MGE length: 10611 bp
Accession: NZ_CP060670 Location: 3086098..3096708 Organism: Salmonella enterica strain 190807_1 Replicon: chromosome
Accession: NZ_CP060670 Location: 3086098..3096708 Organism: Salmonella enterica strain 190807_1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q86_RS15085 (3082038) | 3082038..3082493 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| H9Q86_RS15090 (3082635) | 3082635..3083864 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| H9Q86_RS15095 (3083895) | 3083895..3084167 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| H9Q86_RS15100 (3084289) | 3084289..3085143 | + | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| H9Q86_RS15105 (3085353) | 3085353..3086111 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| H9Q86_RS15110 (3086098) | 3086098..3086610 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| H9Q86_RS15115 (3086754) | 3086754..3087830 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| H9Q86_RS15120 (3087827) | 3087827..3088570 | - | 744 | WP_000798504.1 | hypothetical protein | VF |
| H9Q86_RS15125 (3088611) | 3088611..3091094 | - | 2484 | WP_000705505.1 | hypothetical protein | VF |
| H9Q86_RS15130 (3091214) | 3091214..3091795 | - | 582 | WP_001244651.1 | hypothetical protein | VF |
| H9Q86_RS15135 (3092514) | 3092514..3093146 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| H9Q86_RS15140 (3093193) | 3093193..3093729 | - | 537 | WP_001038502.1 | hypothetical protein | VF |
| H9Q86_RS15145 (3094537) | 3094537..3094935 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| H9Q86_RS15150 (3094935) | 3094935..3095162 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| H9Q86_RS15155 (3095371) | 3095371..3095622 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| H9Q86_RS15160 (3095902) | 3095902..3096708 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| H9Q86_RS15170 (3096993) | 3096993..3097751 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| H9Q86_RS15175 (3098016) | 3098016..3098561 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| H9Q86_RS15180 (3098637) | 3098637..3100154 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.009 |