MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP060668 Location: 1181066..1192421 Organism: Salmonella enterica strain 190819_2 Replicon: chromosome
Accession: NZ_CP060668 Location: 1181066..1192421 Organism: Salmonella enterica strain 190819_2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q87_RS05665 (1176512) | 1176512..1177610 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| H9Q87_RS05670 (1177620) | 1177620..1179137 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| H9Q87_RS05675 (1179213) | 1179213..1179758 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| H9Q87_RS05680 (1180023) | 1180023..1180781 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| H9Q87_RS05690 (1181066) | 1181066..1181872 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| H9Q87_RS05695 (1182152) | 1182152..1182403 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| H9Q87_RS05700 (1182612) | 1182612..1182839 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| H9Q87_RS05705 (1182839) | 1182839..1183237 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| H9Q87_RS05710 (1184045) | 1184045..1184581 | + | 537 | WP_001038502.1 | hypothetical protein | VF |
| H9Q87_RS05715 (1184628) | 1184628..1185260 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| H9Q87_RS05720 (1185979) | 1185979..1186560 | + | 582 | WP_001244651.1 | hypothetical protein | VF |
| H9Q87_RS05725 (1186680) | 1186680..1189163 | + | 2484 | WP_000705505.1 | hypothetical protein | VF |
| H9Q87_RS05730 (1189204) | 1189204..1189947 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| H9Q87_RS05735 (1189944) | 1189944..1191020 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| H9Q87_RS05740 (1191164) | 1191164..1191676 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| H9Q87_RS05745 (1191663) | 1191663..1192421 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| H9Q87_RS05750 (1192631) | 1192631..1193485 | - | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| H9Q87_RS05755 (1193607) | 1193607..1193879 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| H9Q87_RS05760 (1193910) | 1193910..1195139 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| H9Q87_RS05765 (1195281) | 1195281..1195736 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| H9Q87_RS05770 (1195840) | 1195840..1196703 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |