MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP060666 Location: 475530..486885 Organism: Salmonella enterica strain 190821_1 Replicon: chromosome
Accession: NZ_CP060666 Location: 475530..486885 Organism: Salmonella enterica strain 190821_1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q88_RS02375 (470976) | 470976..472074 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| H9Q88_RS02380 (472084) | 472084..473601 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| H9Q88_RS02385 (473677) | 473677..474222 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| H9Q88_RS02390 (474487) | 474487..475245 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| H9Q88_RS02400 (475530) | 475530..476336 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| H9Q88_RS02405 (476616) | 476616..476867 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| H9Q88_RS02410 (477076) | 477076..477303 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| H9Q88_RS02415 (477303) | 477303..477701 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| H9Q88_RS02420 (478509) | 478509..479045 | + | 537 | WP_001038502.1 | hypothetical protein | VF |
| H9Q88_RS02425 (479092) | 479092..479724 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| H9Q88_RS02430 (480443) | 480443..481024 | + | 582 | WP_001244651.1 | hypothetical protein | VF |
| H9Q88_RS02435 (481144) | 481144..483627 | + | 2484 | WP_000705505.1 | hypothetical protein | VF |
| H9Q88_RS02440 (483668) | 483668..484411 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| H9Q88_RS02445 (484408) | 484408..485484 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| H9Q88_RS02450 (485628) | 485628..486140 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| H9Q88_RS02455 (486127) | 486127..486885 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| H9Q88_RS02460 (487095) | 487095..487949 | - | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| H9Q88_RS02465 (488071) | 488071..488343 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| H9Q88_RS02470 (488374) | 488374..489603 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| H9Q88_RS02475 (489745) | 489745..490200 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| H9Q88_RS02480 (490304) | 490304..491167 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |