MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 56563 bp
Accession: NZ_CP060472 Location: 1..56563 Organism: Xanthomonas citri pv. citri strain DAR73889 Replicon: plasmid pXAS56
Accession: NZ_CP060472 Location: 1..56563 Organism: Xanthomonas citri pv. citri strain DAR73889 Replicon: plasmid pXAS56
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H8Z72_RS23570 () | 1..1221 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| H8Z72_RS23575 () | 1587..5471 | - | 3885 | WP_203197368.1 | TAL effector repeat-containing protein | - |
| H8Z72_RS23580 () | 5717..5938 | - | 222 | WP_011052944.1 | hypothetical protein | - |
| H8Z72_RS23585 () | 6228..6764 | - | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| H8Z72_RS23590 () | 6754..6966 | - | 213 | WP_011052947.1 | hypothetical protein | - |
| H8Z72_RS23595 () | 6963..7244 | - | 282 | WP_131826283.1 | hypothetical protein | - |
| H8Z72_RS23600 () | 7237..7569 | - | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| H8Z72_RS23605 () | 7569..7826 | - | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| H8Z72_RS23610 () | 8032..8634 | + | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| H8Z72_RS23615 () | 8618..8922 | + | 305 | Protein_9 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| H8Z72_RS23620 () | 9089..9247 | - | 159 | WP_011052952.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| H8Z72_RS23625 () | 9323..10491 | + | 1169 | Protein_11 | IS3 family transposase ISXac3 | Transposase |
| H8Z72_RS23630 () | 10881..11096 | + | 216 | WP_155400515.1 | hypothetical protein | - |
| H8Z72_RS23640 () | 12463..12699 | - | 237 | WP_015462622.1 | Wgr family protein | - |
| H8Z72_RS23645 () | 12703..13032 | - | 330 | WP_011052996.1 | partition gene repressor | - |
| H8Z72_RS23650 () | 13084..14115 | - | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| H8Z72_RS23655 () | 14129..14896 | - | 768 | WP_011052998.1 | ParA family protein | - |
| H8Z72_RS23660 () | 15701..16927 | - | 1227 | WP_015472949.1 | plasmid replication initiator protein | - |
| H8Z72_RS23665 () | 17207..18394 | - | 1188 | WP_040150073.1 | zeta toxin family protein | - |
| H8Z72_RS23670 () | 18401..18664 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| H8Z72_RS23675 () | 18689..19090 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H8Z72_RS23680 () | 19087..19347 | - | 261 | WP_005917852.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| H8Z72_RS23685 () | 19538..20110 | + | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| H8Z72_RS23690 () | 20141..20729 | - | 589 | Protein_24 | IS3 family transposase ISXac3 | Transposase |
| H8Z72_RS23695 () | 22283..25876 | + | 3594 | WP_203197369.1 | TAL effector repeat-containing protein | - |
| H8Z72_RS23700 () | 25975..26121 | - | 147 | Protein_26 | transposase | - |
| H8Z72_RS23705 () | 26166..26864 | - | 699 | WP_015462628.1 | UPF0149 family protein | - |
| H8Z72_RS23710 () | 26883..29858 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| H8Z72_RS23715 () | 29863..30282 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| H8Z72_RS23720 () | 30282..30521 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| H8Z72_RS23725 () | 30736..31659 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| H8Z72_RS23730 () | 31700..32014 | - | 315 | Protein_32 | hypothetical protein | - |
| H8Z72_RS23735 () | 32751..33041 | + | 291 | WP_003490957.1 | hypothetical protein | - |
| H8Z72_RS23740 () | 33276..33566 | + | 291 | WP_017173636.1 | hypothetical protein | - |
| H8Z72_RS23745 () | 33594..33920 | + | 327 | WP_052462055.1 | TrbC/VirB2 family protein | - |
| H8Z72_RS23750 () | 34060..34362 | + | 303 | WP_005923977.1 | IS66 family transposase ISDpr4 | Transposase |
| H8Z72_RS23755 () | 34356..34628 | + | 273 | WP_005918020.1 | IS66 family transposase ISAzo15 | Transposase |
| H8Z72_RS23760 () | 34817..35017 | + | 201 | WP_159066134.1 | IS66 family transposase ISPpu19 | Transposase |
| H8Z72_RS23765 () | 35138..35986 | - | 849 | WP_199822664.1 | type III effector | - |
| H8Z72_RS23770 () | 36113..37168 | - | 1056 | WP_203179630.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| H8Z72_RS23775 () | 37362..38294 | + | 933 | Protein_41 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| H8Z72_RS23780 () | 38339..41131 | + | 2793 | Protein_42 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| H8Z72_RS23785 () | 41158..42325 | - | 1168 | Protein_43 | IS3 family transposase ISXac3 | Transposase |
| H8Z72_RS23790 () | 42367..42645 | - | 279 | WP_203179628.1 | hypothetical protein | - |
| H8Z72_RS23795 () | 42644..42862 | + | 219 | WP_003491150.1 | antitoxin MazE family protein | Antitoxin Detail |
| H8Z72_RS23800 () | 42859..43185 | + | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| H8Z72_RS23805 () | 43239..46214 | - | 2976 | WP_058967967.1 | Multifunctional conjugation protein TraI | Relaxase |
| H8Z72_RS23810 () | 46228..47803 | - | 1576 | Protein_48 | type IV secretion system DNA-binding domain-containing protein | - |
| H8Z72_RS23815 () | 48062..48403 | - | 342 | WP_031425612.1 | hypothetical protein | - |
| H8Z72_RS23820 () | 48602..49216 | - | 615 | WP_040150107.1 | hypothetical protein | - |
| H8Z72_RS23825 () | 49332..49625 | - | 294 | WP_040150110.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H8Z72_RS23830 () | 49622..49891 | - | 270 | WP_003490597.1 | hypothetical protein | - |
| H8Z72_RS23835 () | 49987..50382 | - | 396 | WP_003490599.1 | hypothetical protein | - |
| H8Z72_RS23840 () | 50871..52038 | - | 1168 | Protein_54 | IS3 family transposase ISXac3 | Transposase |
| H8Z72_RS23845 () | 52065..52442 | + | 378 | WP_059022860.1 | hypothetical protein | - |
| H8Z72_RS23850 () | 52439..53146 | + | 708 | WP_039587580.1 | hypothetical protein | - |
| H8Z72_RS23855 () | 53195..53548 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| H8Z72_RS23860 () | 53943..54152 | - | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| H8Z72_RS23865 () | 54149..54457 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| H8Z72_RS23870 () | 54913..55539 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| H8Z72_RS23875 () | 55536..55859 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| H8Z72_RS23880 () | 56002..56316 | + | 315 | WP_173426676.1 | partition protein C | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|