MGE detailed information
MGE type: Genomic_island MGE length: 30473 bp
Accession: NZ_CP060470 Location: 2227706..2258178 Organism: Xanthomonas citri pv. citri strain DAR73889 Replicon: chromosome
Accession: NZ_CP060470 Location: 2227706..2258178 Organism: Xanthomonas citri pv. citri strain DAR73889 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H8Z72_RS09645 () | 2223499..2225157 | + | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| H8Z72_RS09650 () | 2225169..2225678 | + | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| H8Z72_RS09655 () | 2225721..2226827 | - | 1107 | WP_203197348.1 | diguanylate cyclase | - |
| H8Z72_RS09660 () | 2227110..2227286 | - | 177 | WP_003485979.1 | hypothetical protein | - |
| H8Z72_RS09665 () | 2227706..2229823 | - | 2118 | WP_040152522.1 | ATP-binding protein | - |
| H8Z72_RS09670 () | 2229820..2231214 | - | 1395 | WP_011051590.1 | SIR2 family protein | - |
| H8Z72_RS09675 () | 2231793..2232026 | - | 234 | WP_040107635.1 | hypothetical protein | - |
| H8Z72_RS09680 () | 2232259..2233260 | + | 1002 | WP_011051588.1 | replication protein | - |
| H8Z72_RS09685 () | 2233659..2233919 | - | 261 | WP_015463320.1 | hypothetical protein | - |
| H8Z72_RS09690 () | 2234480..2234680 | + | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| H8Z72_RS09695 () | 2234625..2234804 | + | 180 | WP_040152520.1 | hypothetical protein | - |
| H8Z72_RS09700 () | 2234819..2235817 | - | 999 | Protein_1892 | IS4 family transposase ISXac1 | Transposase |
| H8Z72_RS09705 () | 2235887..2236974 | + | 1088 | WP_087944898.1 | IS3 family transposase ISXac2 | Transposase |
| H8Z72_RS09710 () | 2237011..2237232 | - | 222 | Protein_1894 | IS4 family transposase ISXac1 | Transposase |
| H8Z72_RS09715 () | 2237276..2237608 | + | 333 | WP_203165057.1 | hypothetical protein | - |
| H8Z72_RS09720 () | 2237631..2238045 | - | 415 | Protein_1896 | plasmid pRiA4b ORF-3 family protein | - |
| H8Z72_RS09725 () | 2238149..2238478 | - | 330 | WP_015463316.1 | hypothetical protein | - |
| H8Z72_RS09730 () | 2238487..2239404 | - | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| H8Z72_RS09735 () | 2239401..2240987 | - | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| H8Z72_RS09740 () | 2240984..2241172 | - | 189 | WP_011051582.1 | hypothetical protein | - |
| H8Z72_RS09745 () | 2241223..2243331 | - | 2109 | WP_015472116.1 | AAA family ATPase | - |
| H8Z72_RS09750 () | 2243521..2244477 | - | 957 | WP_197707729.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| H8Z72_RS09755 () | 2245096..2246321 | - | 1226 | Protein_1903 | IS3 family transposase ISJsp1 | Transposase |
| H8Z72_RS09760 () | 2246370..2247638 | + | 1269 | Protein_1904 | Tn3 family transposase ISPsy42 | Transposase |
| H8Z72_RS09765 () | 2247808..2248086 | + | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| H8Z72_RS09770 () | 2248074..2248364 | + | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H8Z72_RS09775 () | 2248367..2248681 | + | 315 | WP_015463310.1 | hypothetical protein | - |
| H8Z72_RS09780 () | 2248952..2249131 | + | 180 | WP_015463309.1 | hypothetical protein | - |
| H8Z72_RS09785 () | 2249344..2250431 | + | 1088 | Protein_1909 | IS3 family transposase ISXcd1 | Transposase |
| H8Z72_RS09790 () | 2250471..2251604 | + | 1134 | Protein_1910 | IS5 family transposase ISXo4 | Transposase |
| H8Z72_RS09795 () | 2251671..2252627 | + | 957 | WP_011051571.1 | hypothetical protein | - |
| H8Z72_RS09800 () | 2252913..2253053 | + | 141 | WP_157860651.1 | hypothetical protein | - |
| H8Z72_RS09805 () | 2253492..2254013 | - | 522 | WP_011051570.1 | hypothetical protein | - |
| H8Z72_RS09810 () | 2254023..2256194 | - | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| H8Z72_RS09815 () | 2257087..2258178 | - | 1092 | WP_040152493.1 | hypothetical protein ; Integrase | Integrase |
| H8Z72_RS09825 () | 2258467..2258868 | - | 402 | WP_003485983.1 | H-NS histone family protein | - |
| H8Z72_RS09830 () | 2259088..2259264 | + | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| H8Z72_RS09835 () | 2259280..2261898 | + | 2619 | WP_015472106.1 | DNA ligase D | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0.006 |