MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 28110 bp
Accession: NZ_CP060468 Location: 1..28110 Organism: Xanthomonas citri pv. citri strain DAR73886 Replicon: plasmid pXAS28
Accession: NZ_CP060468 Location: 1..28110 Organism: Xanthomonas citri pv. citri strain DAR73886 Replicon: plasmid pXAS28
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H8Z71_RS22950 () | 140..517 | + | 378 | WP_040245303.1 | TrbC/VirB2 family protein | - |
| H8Z71_RS22955 () | 514..813 | + | 300 | WP_007968751.1 | VirB3 family type IV secretion system protein | - |
| H8Z71_RS22960 () | 836..3469 | + | 2634 | WP_017161281.1 | Type IV secretion system protein virB4 | VF |
| H8Z71_RS22965 () | 3466..4131 | + | 666 | WP_017161282.1 | hypothetical protein | - |
| H8Z71_RS22970 () | 4182..4397 | + | 216 | WP_017161283.1 | hypothetical protein | - |
| H8Z71_RS22975 () | 4390..4797 | + | 408 | WP_017161284.1 | hypothetical protein | - |
| H8Z71_RS22980 () | 4785..5651 | + | 867 | WP_017161285.1 | type IV secretion system protein | - |
| H8Z71_RS22985 () | 5648..6322 | + | 675 | WP_017161286.1 | type IV secretion system protein | - |
| H8Z71_RS22990 () | 6347..7129 | + | 783 | WP_017157765.1 | Type IV secretion system protein virB9 | VF |
| H8Z71_RS22995 () | 7131..8351 | + | 1221 | WP_017168840.1 | Type IV secretion system protein virB10 | VF |
| H8Z71_RS23000 () | 8362..9384 | + | 1023 | WP_045123784.1 | Type IV secretion system protein VirB11 | VF |
| H8Z71_RS23005 () | 9395..10282 | + | 888 | WP_039577931.1 | Type IV secretion system protein virB1 | VF |
| H8Z71_RS23010 () | 10328..10915 | + | 588 | WP_017161637.1 | hypothetical protein | - |
| H8Z71_RS23015 () | 10960..11535 | + | 576 | WP_039582731.1 | Phospholipase D | VF |
| H8Z71_RS23020 () | 11546..11959 | + | 414 | WP_039582729.1 | hypothetical protein | - |
| H8Z71_RS23025 () | 12013..12429 | + | 417 | WP_017159868.1 | hypothetical protein | - |
| H8Z71_RS23030 () | 12566..12793 | + | 228 | WP_039582726.1 | antitoxin MazE family protein | Antitoxin Detail |
| H8Z71_RS23035 () | 12780..13106 | + | 327 | WP_007968778.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| H8Z71_RS23040 () | 13152..13796 | - | 645 | WP_039580900.1 | Abi family protein | - |
| H8Z71_RS23045 () | 14328..14630 | + | 303 | WP_017168787.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| H8Z71_RS23050 () | 14700..17675 | - | 2976 | WP_045123782.1 | Multifunctional conjugation protein TraI | Relaxase |
| H8Z71_RS23055 () | 17689..19263 | - | 1575 | WP_045123781.1 | type IV secretion system DNA-binding domain-containing protein | - |
| H8Z71_RS23060 () | 19267..19440 | - | 174 | WP_162886871.1 | hypothetical protein | - |
| H8Z71_RS23065 () | 19440..19835 | - | 396 | WP_039447651.1 | hypothetical protein | - |
| H8Z71_RS23070 () | 20225..20671 | + | 447 | WP_033483209.1 | hypothetical protein | - |
| H8Z71_RS23075 () | 20668..21375 | + | 708 | WP_045123792.1 | hypothetical protein | - |
| H8Z71_RS23080 () | 21421..21774 | + | 354 | WP_033481414.1 | hypothetical protein | - |
| H8Z71_RS23085 () | 21912..22193 | - | 282 | WP_040245198.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| H8Z71_RS23090 () | 22180..22449 | - | 270 | WP_017158384.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| H8Z71_RS23095 () | 22558..23526 | - | 969 | WP_040245200.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| H8Z71_RS23100 () | 24078..24359 | - | 282 | WP_017161425.1 | hypothetical protein | - |
| H8Z71_RS23105 () | 24383..25081 | - | 699 | WP_078538983.1 | AAA family ATPase | - |
| H8Z71_RS23110 () | 25767..26588 | - | 822 | WP_033838015.1 | hypothetical protein | - |
| H8Z71_RS23115 () | 27098..27427 | - | 330 | WP_017159849.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|