MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 61267 bp
Accession: NZ_CP060466 Location: 1..61267 Organism: Xanthomonas citri pv. citri strain DAR73886 Replicon: plasmid pXAC64
Accession: NZ_CP060466 Location: 1..61267 Organism: Xanthomonas citri pv. citri strain DAR73886 Replicon: plasmid pXAC64
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H8Z71_RS22320 () | 1..1221 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| H8Z71_RS22325 () | 1587..4769 | - | 3183 | WP_203165086.1 | TAL effector repeat-containing protein | - |
| H8Z71_RS22330 () | 5015..5236 | - | 222 | WP_011052944.1 | hypothetical protein | - |
| H8Z71_RS22335 () | 5526..6062 | - | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| H8Z71_RS22340 () | 6052..6264 | - | 213 | WP_011052947.1 | hypothetical protein | - |
| H8Z71_RS22345 () | 6261..6512 | - | 252 | WP_125459571.1 | hypothetical protein | - |
| H8Z71_RS22350 () | 6535..6867 | - | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| H8Z71_RS22355 () | 6867..7124 | - | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| H8Z71_RS22360 () | 7330..7932 | + | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| H8Z71_RS22365 () | 7916..8220 | + | 305 | Protein_9 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| H8Z71_RS22370 () | 8387..11347 | - | 2961 | WP_040245166.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| H8Z71_RS22375 () | 11392..12324 | - | 933 | Protein_11 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| H8Z71_RS22380 () | 12517..13572 | + | 1056 | WP_040230045.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| H8Z71_RS22385 () | 14001..14552 | + | 552 | WP_078514874.1 | type III effector | - |
| H8Z71_RS22390 () | 14673..14873 | - | 201 | WP_159066134.1 | IS66 family transposase ISPpu19 | Transposase |
| H8Z71_RS22395 () | 15062..15334 | - | 273 | WP_005918020.1 | IS66 family transposase ISAzo15 | Transposase |
| H8Z71_RS22400 () | 15328..15630 | - | 303 | WP_005923977.1 | IS66 family transposase ISDpr4 | Transposase |
| H8Z71_RS22405 () | 15834..16757 | - | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| H8Z71_RS22410 () | 16972..17211 | + | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| H8Z71_RS22415 () | 17211..17630 | + | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| H8Z71_RS22420 () | 17635..20610 | + | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| H8Z71_RS22425 () | 20629..21327 | + | 699 | WP_015462628.1 | UPF0149 family protein | - |
| H8Z71_RS22430 () | 21372..21518 | + | 147 | Protein_22 | transposase | - |
| H8Z71_RS22435 () | 21617..25210 | - | 3594 | WP_203165087.1 | TAL effector repeat-containing protein | - |
| H8Z71_RS22440 () | 26764..27374 | + | 611 | Protein_24 | IS3 family transposase | - |
| H8Z71_RS22445 () | 27405..27977 | - | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| H8Z71_RS22450 () | 28168..28428 | + | 261 | WP_005917852.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| H8Z71_RS22455 () | 28425..28826 | + | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H8Z71_RS22460 () | 28851..29114 | + | 264 | WP_005917846.1 | hypothetical protein | - |
| H8Z71_RS22465 () | 29121..30308 | + | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| H8Z71_RS22470 () | 30588..31814 | + | 1227 | WP_015472949.1 | plasmid replication initiator protein | - |
| H8Z71_RS22475 () | 32619..33386 | + | 768 | WP_011052998.1 | ParA family protein | - |
| H8Z71_RS22480 () | 33400..34431 | + | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| H8Z71_RS22485 () | 34483..34812 | + | 330 | WP_011052996.1 | partition gene repressor | - |
| H8Z71_RS22490 () | 34816..35052 | + | 237 | WP_015462622.1 | Wgr family protein | - |
| H8Z71_RS22495 () | 35167..36254 | + | 1088 | WP_203165062.1 | IS3 family transposase ISXac2 | Transposase |
| H8Z71_RS22500 () | 36294..36500 | - | 207 | Protein_36 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| H8Z71_RS22505 () | 36497..36715 | - | 219 | WP_003491150.1 | antitoxin MazE family protein | - |
| H8Z71_RS22510 () | 36852..37238 | - | 387 | WP_003491149.1 | hypothetical protein | - |
| H8Z71_RS22515 () | 37315..37734 | - | 420 | WP_011052981.1 | hypothetical protein | - |
| H8Z71_RS22520 () | 37860..38738 | - | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| H8Z71_RS22525 () | 38749..39771 | - | 1023 | WP_005931776.1 | Type IV secretion system protein VirB11 | VF |
| H8Z71_RS22530 () | 39782..41002 | - | 1221 | WP_005931779.1 | Type IV secretion system protein virB10 | VF |
| H8Z71_RS22535 () | 41004..41786 | - | 783 | WP_203165059.1 | Type IV secretion system protein virB9 | VF |
| H8Z71_RS22540 () | 41811..42485 | - | 675 | WP_005931784.1 | type IV secretion system protein | - |
| H8Z71_RS22545 () | 42482..43342 | - | 861 | WP_040245489.1 | type IV secretion system protein | - |
| H8Z71_RS22550 () | 43344..43733 | - | 390 | WP_040245490.1 | hypothetical protein | - |
| H8Z71_RS22555 () | 43726..43938 | - | 213 | WP_005931790.1 | hypothetical protein | - |
| H8Z71_RS22560 () | 43986..44654 | - | 669 | WP_015462618.1 | VirB5 protein | - |
| H8Z71_RS22565 () | 44651..47284 | - | 2634 | WP_203165063.1 | Type IV secretion system protein virB4 | VF |
| H8Z71_RS22570 () | 47307..47606 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| H8Z71_RS22575 () | 47603..47836 | - | 234 | Protein_51 | TrbC/VirB2 family protein | - |
| H8Z71_RS22585 () | 49032..49154 | + | 123 | Protein_53 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| H8Z71_RS22590 () | 49208..52183 | - | 2976 | WP_203165085.1 | Multifunctional conjugation protein TraI | Relaxase |
| H8Z71_RS22595 () | 52197..53771 | - | 1575 | WP_045123781.1 | type IV secretion system DNA-binding domain-containing protein | - |
| H8Z71_RS22600 () | 54030..54371 | - | 342 | WP_031425612.1 | hypothetical protein | - |
| H8Z71_RS22605 () | 54570..55184 | - | 615 | WP_040150107.1 | hypothetical protein | - |
| H8Z71_RS22610 () | 55300..55593 | - | 294 | WP_040150110.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H8Z71_RS22615 () | 55590..55859 | - | 270 | WP_003490597.1 | hypothetical protein | - |
| H8Z71_RS22620 () | 55955..56350 | - | 396 | WP_003490599.1 | hypothetical protein | - |
| H8Z71_RS22625 () | 56698..57144 | + | 447 | WP_011052937.1 | hypothetical protein | - |
| H8Z71_RS22630 () | 57141..57848 | + | 708 | WP_039587580.1 | hypothetical protein | - |
| H8Z71_RS22635 () | 57897..58250 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| H8Z71_RS22640 () | 58645..58854 | - | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| H8Z71_RS22645 () | 58851..59159 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| H8Z71_RS22650 () | 59615..60241 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| H8Z71_RS22655 () | 60238..60561 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| H8Z71_RS22660 () | 60706..61020 | + | 315 | WP_173426676.1 | partition protein C | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|