MGE detailed information
MGE type: Prophage MGE length: 53965 bp
Accession: NZ_CP060271 Location: 1808111..1862075 Organism: Staphylococcus xylosus strain DMSX03 Replicon: chromosome
Accession: NZ_CP060271 Location: 1808111..1862075 Organism: Staphylococcus xylosus strain DMSX03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DMSX03_RS08480 () | 1803473..1805086 | - | 1614 | WP_029377552.1 | bacillithiol biosynthesis cysteine-adding enzyme BshC | - |
| DMSX03_RS08485 () | 1805359..1805805 | + | 447 | WP_029377553.1 | N-acetyltransferase | - |
| DMSX03_RS08490 () | 1805937..1806623 | - | 687 | WP_186335301.1 | YjjG family noncanonical pyrimidine nucleotidase | - |
| DMSX03_RS08495 () | 1806747..1806881 | - | 135 | WP_037556984.1 | beta-class phenol-soluble modulin | - |
| DMSX03_RS08500 () | 1806924..1807058 | - | 135 | WP_037556986.1 | beta-class phenol-soluble modulin | - |
| DMSX03_RS08505 () | 1807112..1807246 | - | 135 | WP_037556988.1 | beta-class phenol-soluble modulin | - |
| DMSX03_RS08510 () | 1807289..1807423 | - | 135 | WP_037556990.1 | beta-class phenol-soluble modulin | - |
| DMSX03_RS08515 () | 1807470..1807604 | - | 135 | WP_186335302.1 | beta-class phenol-soluble modulin | - |
| DMSX03_RS08520 () | 1808111..1809994 | - | 1884 | WP_186335303.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| DMSX03_RS08525 () | 1810680..1811189 | + | 510 | Protein_1648 | IS1182 family transposase ISBpu1 | Transposase |
| DMSX03_RS08530 () | 1811247..1811495 | - | 249 | WP_029379025.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| DMSX03_RS08535 () | 1812181..1812297 | - | 117 | WP_158227722.1 | hypothetical protein | - |
| DMSX03_RS08540 () | 1812678..1812845 | - | 168 | WP_155238586.1 | hypothetical protein | Toxin Detail |
| DMSX03_RS08545 () | 1813289..1813450 | - | 162 | WP_156035523.1 | hypothetical protein | - |
| DMSX03_RS08550 () | 1814016..1814435 | - | 420 | WP_186335304.1 | MarR family transcriptional regulator | - |
| DMSX03_RS08555 () | 1814554..1815525 | + | 972 | WP_186335305.1 | acryloyl-CoA reductase | - |
| DMSX03_RS08560 () | 1815574..1815984 | - | 411 | Protein_1655 | YolD-like family protein | - |
| DMSX03_RS08565 () | 1816186..1816830 | - | 645 | WP_186335306.1 | hypothetical protein | - |
| DMSX03_RS08570 () | 1817210..1818157 | - | 948 | WP_186335307.1 | N-acetylmuramoyl-L-alanine amidase | - |
| DMSX03_RS08575 () | 1818263..1818400 | - | 138 | WP_186335308.1 | hypothetical protein | - |
| DMSX03_RS08580 () | 1818585..1818842 | - | 258 | WP_186335309.1 | phage holin | Toxin Detail |
| - () | 1818893..1819057 | + | 165 | - | - | Antitoxin Detail |
| DMSX03_RS08585 () | 1819018..1819195 | - | 178 | Protein_1660 | putative holin-like toxin | - |
| DMSX03_RS08590 () | 1819277..1819558 | - | 282 | WP_171915384.1 | hypothetical protein | - |
| DMSX03_RS08595 () | 1819593..1821479 | - | 1887 | WP_186335310.1 | hypothetical protein | VF |
| DMSX03_RS08600 () | 1821535..1821867 | - | 333 | WP_186335311.1 | DUF2977 domain-containing protein | - |
| DMSX03_RS08605 () | 1821867..1823726 | - | 1860 | WP_186335312.1 | phage baseplate upper protein | - |
| DMSX03_RS08610 () | 1823726..1825633 | - | 1908 | WP_186335313.1 | hypothetical protein | - |
| DMSX03_RS08615 () | 1825648..1827501 | - | 1854 | WP_186335314.1 | phage tail protein | - |
| DMSX03_RS08620 () | 1827512..1828438 | - | 927 | WP_186335315.1 | phage tail family protein | - |
| DMSX03_RS08625 () | 1828450..1831539 | - | 3090 | WP_186335316.1 | terminase | - |
| DMSX03_RS08630 () | 1831542..1831850 | - | 309 | WP_135059255.1 | hypothetical protein | - |
| DMSX03_RS08635 () | 1831913..1832407 | - | 495 | WP_135059256.1 | hypothetical protein | - |
| DMSX03_RS08640 () | 1832460..1833005 | - | 546 | WP_186335317.1 | phage tail protein | - |
| DMSX03_RS08645 () | 1833011..1833433 | - | 423 | WP_186335318.1 | DUF3168 domain-containing protein | - |
| DMSX03_RS08650 () | 1833445..1833858 | - | 414 | WP_061050627.1 | HK97 gp10 family phage protein | - |
| DMSX03_RS08655 () | 1833845..1834180 | - | 336 | WP_186335319.1 | phage head-tail adapter protein | - |
| DMSX03_RS08660 () | 1834182..1834478 | - | 297 | WP_119616026.1 | phage head-tail adapter protein | - |
| DMSX03_RS08665 () | 1834478..1834771 | - | 294 | WP_119616028.1 | Rho termination factor N-terminal domain-containing protein | - |
| DMSX03_RS08670 () | 1834785..1835717 | - | 933 | WP_186335320.1 | sugar-binding protein | - |
| DMSX03_RS08675 () | 1835729..1836253 | - | 525 | WP_186335321.1 | phage scaffolding protein | - |
| DMSX03_RS08680 () | 1836372..1836536 | - | 165 | WP_186335322.1 | hypothetical protein | - |
| DMSX03_RS08685 () | 1836603..1836749 | - | 147 | WP_157822572.1 | hypothetical protein | - |
| DMSX03_RS08690 () | 1836746..1838338 | - | 1593 | WP_186335323.1 | hypothetical protein | - |
| DMSX03_RS08695 () | 1838298..1839710 | - | 1413 | WP_186335324.1 | phage portal protein | - |
| DMSX03_RS08700 () | 1839723..1840931 | - | 1209 | WP_119616050.1 | PBSX family phage terminase large subunit | - |
| DMSX03_RS08705 () | 1840924..1841445 | - | 522 | WP_186335325.1 | terminase small subunit | - |
| DMSX03_RS08710 () | 1841517..1842152 | - | 636 | WP_186335326.1 | hypothetical protein | - |
| DMSX03_RS08715 () | 1842405..1842827 | - | 423 | WP_186335327.1 | DUF1492 domain-containing protein | - |
| DMSX03_RS08720 () | 1842985..1843281 | - | 297 | WP_186335328.1 | DUF5052 family protein | - |
| DMSX03_RS08725 () | 1843345..1844040 | + | 696 | WP_186335329.1 | DUF4145 domain-containing protein | - |
| DMSX03_RS08730 () | 1844022..1844204 | - | 183 | WP_186335330.1 | hypothetical protein | - |
| DMSX03_RS08735 () | 1844205..1844516 | - | 312 | WP_186335331.1 | hypothetical protein | - |
| DMSX03_RS08740 () | 1844518..1844880 | - | 363 | WP_186335332.1 | hypothetical protein | - |
| DMSX03_RS08745 () | 1844880..1845065 | - | 186 | WP_119616189.1 | hypothetical protein | - |
| DMSX03_RS08750 () | 1845262..1845462 | - | 201 | WP_135059275.1 | hypothetical protein | - |
| DMSX03_RS08755 () | 1845459..1846262 | - | 804 | WP_186335629.1 | ATP-binding protein | - |
| DMSX03_RS08760 () | 1846360..1847211 | - | 852 | WP_186335333.1 | DnaD domain protein | - |
| DMSX03_RS08765 () | 1847253..1848068 | - | 816 | WP_135059278.1 | recombinase RecT | - |
| DMSX03_RS08770 () | 1848080..1848991 | - | 912 | WP_186335630.1 | YqaJ viral recombinase family protein | - |
| DMSX03_RS08775 () | 1849036..1849335 | - | 300 | WP_101051285.1 | hypothetical protein | - |
| DMSX03_RS08780 () | 1849410..1849589 | - | 180 | WP_186335334.1 | hypothetical protein | - |
| DMSX03_RS08785 () | 1849595..1849900 | - | 306 | WP_186335335.1 | DUF771 domain-containing protein | - |
| DMSX03_RS08790 () | 1850000..1850581 | + | 582 | WP_186335336.1 | hypothetical protein | - |
| DMSX03_RS08795 () | 1850866..1851390 | + | 525 | WP_119616181.1 | hypothetical protein | - |
| DMSX03_RS08800 () | 1851534..1851704 | + | 171 | WP_186335337.1 | hypothetical protein | - |
| DMSX03_RS08805 () | 1851716..1852006 | - | 291 | WP_186335338.1 | hypothetical protein | - |
| DMSX03_RS08810 () | 1852029..1852277 | - | 249 | WP_186335339.1 | helix-turn-helix transcriptional regulator | - |
| DMSX03_RS08815 () | 1852478..1853194 | + | 717 | WP_186335340.1 | XRE family transcriptional regulator | - |
| DMSX03_RS08820 () | 1853357..1853857 | + | 501 | WP_081224923.1 | PH domain-containing protein | - |
| DMSX03_RS08825 () | 1854010..1854990 | + | 981 | WP_186335341.1 | DUF3644 domain-containing protein | - |
| DMSX03_RS08830 () | 1855160..1856203 | + | 1044 | WP_186335342.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DMSX03_RS08840 () | 1856730..1857239 | - | 510 | WP_038678318.1 | metallophosphoesterase | - |
| DMSX03_RS08845 () | 1857239..1857820 | - | 582 | WP_029379027.1 | dITP/XTP pyrophosphatase | VF |
| DMSX03_RS08850 () | 1857832..1858632 | - | 801 | WP_029379028.1 | glutamate racemase | - |
| DMSX03_RS08855 () | 1858840..1859652 | - | 813 | WP_038678316.1 | succinate dehydrogenase iron-sulfur subunit | - |
| DMSX03_RS08860 () | 1859655..1861418 | - | 1764 | WP_029379030.1 | succinate dehydrogenase flavoprotein subunit | - |
| DMSX03_RS08865 () | 1861464..1862075 | - | 612 | WP_029379031.1 | succinate dehydrogenase cytochrome b558 subunit | - |
| DMSX03_RS08870 () | 1862404..1864191 | - | 1788 | WP_029379032.1 | excinuclease ABC subunit UvrC | - |
| DMSX03_RS08875 () | 1864520..1864834 | - | 315 | WP_017724191.1 | thioredoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|