MGE detailed information
MGE type: Genomic_island MGE length: 31461 bp
Accession: NZ_CP060015 Location: 2850288..2881748 Organism: Mycobacterium malmoense strain DSM 44163 Replicon: chromosome
Accession: NZ_CP060015 Location: 2850288..2881748 Organism: Mycobacterium malmoense strain DSM 44163 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5T25_RS13320 (H5T25_13210) | 2845363..2846319 | - | 957 | WP_083011089.1 | class I SAM-dependent methyltransferase | - |
| H5T25_RS13325 (H5T25_13215) | 2846464..2847345 | + | 882 | WP_083011088.1 | CoA ester lyase | - |
| H5T25_RS13330 (H5T25_13220) | 2847449..2848684 | + | 1236 | WP_083011087.1 | osmoprotectant NAGGN system M42 family peptidase | - |
| H5T25_RS13335 (H5T25_13225) | 2848701..2849654 | - | 954 | WP_071510739.1 | GGDEF domain-containing protein | - |
| H5T25_RS13340 (H5T25_13230) | 2850018..2850248 | + | 231 | WP_071510740.1 | DUF167 domain-containing protein | - |
| H5T25_RS13345 (H5T25_13235) | 2850288..2851202 | - | 915 | WP_230981212.1 | alpha/beta hydrolase | - |
| H5T25_RS13350 (H5T25_13240) | 2851247..2851933 | + | 687 | WP_176219999.1 | hypothetical protein | VF |
| H5T25_RS13355 (H5T25_13245) | 2851926..2852699 | + | 774 | WP_071510743.1 | class I SAM-dependent methyltransferase | - |
| H5T25_RS13360 (H5T25_13250) | 2852803..2853006 | - | 204 | WP_071510744.1 | cold-shock protein | - |
| H5T25_RS13365 (H5T25_13255) | 2853120..2854397 | - | 1278 | WP_083011139.1 | DEAD/DEAH box helicase | - |
| H5T25_RS13370 (H5T25_13260) | 2855225..2855782 | - | 558 | Protein_2657 | TetR/AcrR family transcriptional regulator | - |
| H5T25_RS13375 (H5T25_13265) | 2855853..2856491 | + | 639 | WP_083011083.1 | class I SAM-dependent methyltransferase | - |
| H5T25_RS13380 (H5T25_13270) | 2856562..2857119 | - | 558 | WP_176220001.1 | hypothetical protein | VF |
| H5T25_RS13385 (H5T25_13275) | 2857331..2858455 | - | 1125 | WP_083011081.1 | hypothetical protein | VF |
| H5T25_RS13390 (H5T25_13280) | 2858549..2859823 | - | 1275 | WP_139797037.1 | hypothetical protein | - |
| H5T25_RS13395 (H5T25_13285) | 2859778..2860461 | - | 684 | WP_139797036.1 | helix-turn-helix domain-containing protein | - |
| H5T25_RS13400 (H5T25_13290) | 2860463..2861362 | - | 900 | WP_083011078.1 | class I SAM-dependent methyltransferase | - |
| H5T25_RS13405 (H5T25_13295) | 2862007..2862687 | - | 681 | WP_265415706.1 | hypothetical protein | - |
| H5T25_RS13410 (H5T25_13300) | 2862687..2863232 | - | 546 | WP_277622400.1 | methyltransferase domain-containing protein | - |
| H5T25_RS13415 (H5T25_13305) | 2863564..2863992 | + | 429 | WP_071510749.1 | cellulose-binding domain-containing protein | - |
| H5T25_RS13420 (H5T25_13310) | 2864697..2865380 | - | 684 | WP_176219997.1 | MBL fold metallo-hydrolase | - |
| H5T25_RS13425 (H5T25_13315) | 2865710..2865916 | + | 207 | WP_071510751.1 | DUF2191 domain-containing protein | - |
| H5T25_RS13430 (H5T25_13320) | 2865907..2866329 | + | 423 | WP_083011075.1 | PIN domain-containing protein | - |
| H5T25_RS13435 (H5T25_13325) | 2866454..2867284 | - | 831 | WP_071510753.1 | DUF1906 domain-containing protein | - |
| H5T25_RS13440 (H5T25_13330) | 2867761..2867997 | + | 237 | WP_083011074.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| H5T25_RS13445 (H5T25_13335) | 2868018..2868431 | + | 414 | WP_071510773.1 | type II toxin-antitoxin system VapC family toxin | - |
| H5T25_RS13450 (H5T25_13340) | 2868713..2868946 | + | 234 | WP_071510754.1 | hypothetical protein | - |
| H5T25_RS13455 (H5T25_13345) | 2868936..2869247 | + | 312 | WP_071510755.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| H5T25_RS13460 (H5T25_13350) | 2869560..2870018 | + | 459 | WP_083011073.1 | prevent-host-death protein | - |
| H5T25_RS13465 (H5T25_13355) | 2870030..2870392 | + | 363 | WP_083011072.1 | hypothetical protein | - |
| H5T25_RS13470 (H5T25_13360) | 2870662..2870868 | + | 207 | WP_071510757.1 | DUF3018 family protein | Antitoxin Detail |
| H5T25_RS13475 (H5T25_13365) | 2870865..2871197 | + | 333 | WP_071510758.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| H5T25_RS13480 (H5T25_13370) | 2871440..2873041 | - | 1602 | WP_071510805.1 | integrase | - |
| H5T25_RS13485 (H5T25_13375) | 2873357..2874358 | - | 1002 | WP_265415707.1 | hypothetical protein | - |
| H5T25_RS13490 (H5T25_13380) | 2874262..2876097 | - | 1836 | WP_265415708.1 | hypothetical protein | - |
| H5T25_RS13495 (H5T25_13385) | 2876769..2877242 | - | 474 | WP_230981213.1 | type II toxin-antitoxin system VapC family toxin | - |
| H5T25_RS13500 (H5T25_13390) | 2877181..2877414 | - | 234 | WP_230981214.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| H5T25_RS13505 (H5T25_13395) | 2877930..2878844 | + | 915 | WP_230981217.1 | SAM-dependent methyltransferase | - |
| H5T25_RS13510 (H5T25_13400) | 2878914..2879564 | - | 651 | WP_071510324.1 | TetR/AcrR family transcriptional regulator | - |
| H5T25_RS13515 (H5T25_13405) | 2880090..2880530 | + | 441 | WP_139797034.1 | hypothetical protein | - |
| H5T25_RS13520 (H5T25_13410) | 2880485..2880886 | + | 402 | WP_277622357.1 | DUF5615 family PIN-like protein | - |
| H5T25_RS13525 (H5T25_13415) | 2881063..2881494 | - | 432 | WP_083011068.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H5T25_RS13530 (H5T25_13420) | 2881491..2881748 | - | 258 | WP_083011067.1 | CopG family transcriptional regulator | Antitoxin Detail |
| H5T25_RS13535 (H5T25_13425) | 2882088..2882774 | - | 687 | Protein_2690 | alpha/beta hydrolase | - |
| H5T25_RS13540 (H5T25_13430) | 2883139..2884620 | + | 1482 | WP_139797033.1 | biotin carboxylase | - |
| H5T25_RS13545 (H5T25_13435) | 2884664..2885860 | + | 1197 | WP_083011066.1 | serine hydrolase | - |
| H5T25_RS13550 (H5T25_13440) | 2886370..2886629 | + | 260 | Protein_2693 | antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|