MGE detailed information
MGE type: Genomic_island MGE length: 27721 bp
Accession: NZ_CP060002 Location: 2878134..2905854 Organism: Xanthomonas citri pv. citri strain SN3-3 Replicon: chromosome
Accession: NZ_CP060002 Location: 2878134..2905854 Organism: Xanthomonas citri pv. citri strain SN3-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZS91_RS12520 (HZS91_02637) | 2875056..2875232 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| HZS91_RS12525 (HZS91_02638) | 2875452..2875853 | + | 402 | WP_003485983.1 | H-NS family nucleoid-associated regulatory protein | - |
| HZS91_RS12535 (HZS91_02640) | 2876142..2877233 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| HZS91_RS12540 (HZS91_02642) | 2878173..2880305 | + | 2133 | WP_234336958.1 | DotA/TraY family protein | - |
| HZS91_RS12545 (HZS91_02643) | 2880315..2880836 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| HZS91_RS12550 (HZS91_02645) | 2881701..2882657 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| HZS91_RS12555 (HZS91_02646) | 2882724..2883857 | - | 1134 | Protein_2460 | IS5 family transposase ISXo4 | Transposase |
| HZS91_RS12565 (HZS91_02648) | 2885197..2885451 | - | 255 | WP_223293127.1 | hypothetical protein | - |
| HZS91_RS22805 | 2885520..2885654 | - | 135 | WP_011051575.1 | hypothetical protein | - |
| HZS91_RS12570 (HZS91_02649) | 2885647..2885961 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| HZS91_RS12575 (HZS91_02650) | 2885964..2886215 | - | 252 | WP_230598886.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HZS91_RS12580 (HZS91_02651) | 2886242..2886520 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| HZS91_RS12585 (HZS91_02652) | 2886690..2887958 | - | 1269 | Protein_2467 | Tn3 family transposase ISPsy42 | Transposase |
| HZS91_RS12590 (HZS91_02653) | 2888007..2889232 | + | 1226 | Protein_2468 | IS3 family transposase ISJsp1 | Transposase |
| HZS91_RS12595 (HZS91_02654) | 2889869..2890576 | + | 708 | Protein_2469 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HZS91_RS12600 (HZS91_02655) | 2890997..2893105 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| HZS91_RS12605 (HZS91_02656) | 2893177..2893344 | + | 168 | WP_227893452.1 | plasmid-related protein | - |
| HZS91_RS12610 (HZS91_02657) | 2893341..2894927 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| HZS91_RS12615 (HZS91_02658) | 2894924..2895841 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| HZS91_RS12620 (HZS91_02659) | 2895850..2896179 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| HZS91_RS12625 (HZS91_02660) | 2896292..2896495 | + | 204 | Protein_2475 | plasmid pRiA4b ORF-3 family protein | - |
| HZS91_RS12630 (HZS91_02661) | 2896570..2897657 | + | 1088 | WP_087943923.1 | IS3 family transposase ISXac2 | Transposase |
| HZS91_RS12635 | 2897698..2897892 | + | 195 | Protein_2477 | plasmid pRiA4b ORF-3 family protein | - |
| HZS91_RS12645 (HZS91_02666) | 2899045..2899305 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| HZS91_RS12650 (HZS91_02667) | 2899704..2900705 | - | 1002 | WP_011051588.1 | replication protein RepA | - |
| HZS91_RS12655 (HZS91_02668) | 2900938..2901171 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| HZS91_RS12660 (HZS91_02669) | 2901750..2903144 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| HZS91_RS12665 (HZS91_02670) | 2903141..2905258 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| HZS91_RS12670 | 2905678..2905854 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| HZS91_RS12675 (HZS91_02671) | 2906137..2907243 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| HZS91_RS12680 (HZS91_02672) | 2907286..2907795 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| HZS91_RS12685 (HZS91_02673) | 2907807..2909465 | - | 1659 | WP_011051595.1 | methyl-accepting chemotaxis protein | - |
| HZS91_RS12690 (HZS91_02674) | 2909761..2910381 | + | 621 | WP_011051596.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0.001 |