MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94653 bp
Accession: NZ_CP060001 Location: 1..94653 Organism: Xanthomonas citri pv. citri strain B2 Replicon: plasmid pB2_V3
Accession: NZ_CP060001 Location: 1..94653 Organism: Xanthomonas citri pv. citri strain B2 Replicon: plasmid pB2_V3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZS92_RS22710 (HZS92_07002) | 489..2729 | + | 2241 | WP_078532850.1 | DotA/TraY family protein | - |
| HZS92_RS22715 (HZS92_07003) | 2919..3470 | - | 552 | WP_236730933.1 | heat-shock protein | - |
| HZS92_RS22720 (HZS92_07004) | 3576..4097 | - | 522 | WP_057675795.1 | 3'-5' exoribonuclease | - |
| HZS92_RS22730 (HZS92_07006) | 4423..4707 | - | 285 | WP_057675793.1 | hypothetical protein | - |
| HZS92_RS22735 (HZS92_07007) | 4807..5007 | - | 201 | WP_058967995.1 | ribbon-helix-helix domain-containing protein | - |
| HZS92_RS22740 (HZS92_07008) | 5019..5381 | - | 363 | WP_057675791.1 | hypothetical protein | - |
| HZS92_RS22745 (HZS92_07009) | 5437..6990 | - | 1554 | WP_236742881.1 | Mobilization protein A | Relaxase |
| HZS92_RS22750 (HZS92_07010) | 7115..7348 | + | 234 | WP_219865223.1 | plasmid mobilization protein | - |
| HZS92_RS22755 (HZS92_07011) | 7342..7911 | - | 570 | Protein_9 | UPF0149 family protein | - |
| HZS92_RS22760 (HZS92_07012) | 7930..9144 | - | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| HZS92_RS22765 | 9218..9400 | - | 183 | Protein_11 | UPF0149 family protein | - |
| HZS92_RS22770 (HZS92_07014) | 9419..12394 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| HZS92_RS22775 (HZS92_07015) | 12399..12818 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| HZS92_RS22780 (HZS92_07016) | 12818..13057 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| HZS92_RS22785 (HZS92_07017) | 13271..14194 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| HZS92_RS22790 (HZS92_07018) | 14313..17393 | - | 3081 | WP_219865226.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS92_RS22795 (HZS92_07022) | 18752..19828 | - | 1077 | WP_040107542.1 | XopE/AvrPphe family type III secretion system effector | - |
| HZS92_RS22800 (HZS92_07024) | 19961..21016 | - | 1056 | WP_011052969.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| HZS92_RS22805 (HZS92_07025) | 21208..22482 | + | 1275 | WP_011052968.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| HZS92_RS22810 (HZS92_07026) | 22490..25480 | + | 2991 | WP_011052967.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| HZS92_RS22815 (HZS92_07027) | 25613..26890 | + | 1278 | WP_011052966.1 | lytic murein transglycosylase | - |
| HZS92_RS22820 (HZS92_07028) | 26933..27277 | + | 345 | WP_075150220.1 | hypothetical protein | - |
| HZS92_RS22825 (HZS92_07029) | 27402..27899 | - | 498 | Protein_23 | hypothetical protein | - |
| HZS92_RS22830 (HZS92_07030) | 27896..28501 | - | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| HZS92_RS22835 (HZS92_07031) | 28498..28947 | - | 450 | WP_015462602.1 | hypothetical protein | - |
| HZS92_RS22840 (HZS92_07032) | 29274..29873 | - | 600 | WP_015462601.1 | hypothetical protein | - |
| HZS92_RS22845 (HZS92_07033) | 30020..30349 | + | 330 | WP_005918642.1 | hypothetical protein | - |
| HZS92_RS22850 (HZS92_07034) | 30399..30605 | + | 207 | WP_011052961.1 | hypothetical protein | - |
| HZS92_RS22855 (HZS92_07035) | 30659..31075 | + | 417 | WP_087962480.1 | transposase | - |
| HZS92_RS22860 | 31206..31388 | - | 183 | Protein_30 | helix-turn-helix domain-containing protein | - |
| HZS92_RS22865 (HZS92_07037) | 31432..32355 | - | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| HZS92_RS22870 (HZS92_07038) | 32569..32808 | + | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| HZS92_RS22875 (HZS92_07039) | 32808..33227 | + | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| HZS92_RS22880 (HZS92_07040) | 33232..36207 | + | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| HZS92_RS22885 | 36226..36408 | + | 183 | Protein_35 | UPF0149 family protein | - |
| HZS92_RS22890 (HZS92_07042) | 36482..37696 | + | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| HZS92_RS22895 (HZS92_07043) | 37715..38284 | + | 570 | Protein_37 | UPF0149 family protein | - |
| HZS92_RS22900 (HZS92_07044) | 38305..38535 | + | 231 | WP_268811174.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| HZS92_RS22905 (HZS92_07045) | 38702..39006 | - | 305 | Protein_39 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| HZS92_RS22910 (HZS92_07046) | 38990..39592 | - | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| HZS92_RS22915 (HZS92_07047) | 39798..40055 | + | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| HZS92_RS22920 (HZS92_07048) | 40055..40387 | + | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HZS92_RS22925 | 40410..40661 | + | 252 | WP_125459571.1 | hypothetical protein | - |
| HZS92_RS22930 (HZS92_07049) | 40658..40870 | + | 213 | WP_011052947.1 | hypothetical protein | - |
| HZS92_RS22935 (HZS92_07050) | 40860..41396 | + | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| HZS92_RS22940 | 41686..41907 | + | 222 | WP_011052944.1 | hypothetical protein | - |
| HZS92_RS22945 (HZS92_07054) | 42153..45431 | + | 3279 | WP_219865225.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS92_RS22950 (HZS92_07056) | 45797..47017 | - | 1221 | WP_011052942.1 | replication initiation protein | - |
| HZS92_RS22955 (HZS92_07057) | 47265..47579 | - | 315 | WP_005918227.1 | ParC family partition-associated protein | - |
| HZS92_RS22960 (HZS92_07058) | 47724..48047 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| HZS92_RS22965 (HZS92_07059) | 48044..48670 | - | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| HZS92_RS22970 (HZS92_07060) | 49126..49434 | + | 309 | WP_015462607.1 | hypothetical protein | - |
| HZS92_RS22975 (HZS92_07061) | 49431..49640 | + | 210 | WP_015462608.1 | helix-turn-helix transcriptional regulator | - |
| HZS92_RS22980 (HZS92_07062) | 50035..50388 | - | 354 | WP_039700904.1 | hypothetical protein | - |
| HZS92_RS22985 (HZS92_07063) | 50437..51146 | - | 710 | Protein_55 | StbB family protein | - |
| HZS92_RS22990 (HZS92_07064) | 51143..51589 | - | 447 | WP_011052937.1 | hypothetical protein | - |
| HZS92_RS22995 (HZS92_07065) | 51937..52332 | + | 396 | WP_011052973.1 | hypothetical protein | - |
| HZS92_RS23000 | 52332..52505 | + | 174 | Protein_58 | hypothetical protein | - |
| HZS92_RS23005 (HZS92_07066) | 52597..52892 | - | 296 | Protein_59 | transposase | - |
| HZS92_RS23010 (HZS92_07068) | 53105..53560 | + | 456 | WP_011052975.1 | hypothetical protein | - |
| HZS92_RS23015 (HZS92_07069) | 53759..54100 | + | 342 | WP_031425612.1 | hypothetical protein | - |
| HZS92_RS23020 (HZS92_07070) | 54359..55933 | + | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| HZS92_RS23025 (HZS92_07071) | 55947..58922 | + | 2976 | WP_045715643.1 | Multifunctional conjugation protein TraI | Relaxase |
| HZS92_RS23030 (HZS92_07072) | 58976..59302 | - | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HZS92_RS23035 (HZS92_07073) | 59299..59469 | - | 171 | WP_017157755.1 | antitoxin MazE family protein | Antitoxin Detail |
| HZS92_RS23040 (HZS92_07074) | 59654..60040 | - | 387 | WP_003491149.1 | hypothetical protein | - |
| HZS92_RS23045 (HZS92_07075) | 60117..60536 | - | 420 | WP_011052981.1 | hypothetical protein | - |
| HZS92_RS23050 (HZS92_07076) | 60662..61540 | - | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| HZS92_RS23055 (HZS92_07077) | 61551..62573 | - | 1023 | WP_011052983.1 | Type IV secretion system protein VirB11 | VF |
| HZS92_RS23060 (HZS92_07078) | 62584..63804 | - | 1221 | WP_011052984.1 | Type IV secretion system protein virB10 | VF |
| HZS92_RS23065 (HZS92_07079) | 63806..64588 | - | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| HZS92_RS23070 (HZS92_07080) | 64613..65287 | - | 675 | WP_011052986.1 | type IV secretion system protein | - |
| HZS92_RS23075 (HZS92_07081) | 65284..66150 | - | 867 | WP_011052987.1 | type IV secretion system protein | - |
| HZS92_RS23080 (HZS92_07082) | 66152..66532 | - | 381 | WP_015462616.1 | hypothetical protein | - |
| HZS92_RS23085 (HZS92_07083) | 66525..66737 | - | 213 | WP_015462617.1 | hypothetical protein | - |
| HZS92_RS23090 (HZS92_07084) | 66785..67453 | - | 669 | WP_015462618.1 | type IV secretion system protein | - |
| HZS92_RS23095 (HZS92_07085) | 67450..70083 | - | 2634 | WP_011052991.1 | Type IV secretion system protein virB4 | VF |
| HZS92_RS23100 (HZS92_07086) | 70106..70405 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| HZS92_RS23105 (HZS92_07087) | 70402..70779 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| HZS92_RS23110 (HZS92_07088) | 70800..71090 | - | 291 | WP_003490957.1 | hypothetical protein | - |
| HZS92_RS23115 | 71403..71618 | + | 216 | WP_155400515.1 | hypothetical protein | - |
| HZS92_RS23120 (HZS92_07090) | 71783..72869 | - | 1087 | Protein_82 | IS3 family transposase ISXac2 | Transposase |
| HZS92_RS23125 (HZS92_07091) | 72984..73220 | - | 237 | WP_015462622.1 | Wgr family protein | - |
| HZS92_RS23130 (HZS92_07092) | 73224..73553 | - | 330 | WP_011052996.1 | TrfB-related DNA-binding protein | - |
| HZS92_RS23135 (HZS92_07093) | 73605..74636 | - | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| HZS92_RS23140 (HZS92_07094) | 74650..75417 | - | 768 | WP_011052998.1 | ParA family protein | - |
| HZS92_RS23145 (HZS92_07096) | 76222..77448 | - | 1227 | WP_015472949.1 | replication protein RepA | - |
| HZS92_RS23150 (HZS92_07097) | 77728..78915 | - | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| HZS92_RS23155 (HZS92_07098) | 78922..79185 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| HZS92_RS23160 (HZS92_07099) | 79210..79611 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HZS92_RS23165 (HZS92_07100) | 79608..79868 | - | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HZS92_RS23170 (HZS92_07102) | 80059..80631 | + | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| HZS92_RS23175 (HZS92_07103) | 80662..81250 | - | 589 | Protein_93 | IS3 family transposase ISXac3 | Transposase |
| HZS92_RS23180 (HZS92_07107) | 82804..86295 | + | 3492 | WP_219865221.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS92_RS23185 (HZS92_07108) | 86615..87574 | - | 960 | WP_250160405.1 | replication protein RepA | - |
| HZS92_RS23195 | 88738..88941 | - | 204 | WP_219865222.1 | hypothetical protein | - |
| HZS92_RS23200 (HZS92_07112) | 88984..89256 | - | 273 | WP_057675818.1 | hypothetical protein | - |
| HZS92_RS23205 (HZS92_07113) | 89308..89955 | - | 648 | WP_057675820.1 | AAA family ATPase | - |
| HZS92_RS23210 (HZS92_07114) | 90070..90417 | - | 348 | WP_057675823.1 | hypothetical protein | - |
| HZS92_RS23215 (HZS92_07115) | 90534..90995 | - | 462 | WP_131830026.1 | hypothetical protein | - |
| HZS92_RS23220 (HZS92_07116) | 91047..91373 | - | 327 | WP_057675825.1 | hypothetical protein | - |
| HZS92_RS23225 (HZS92_07117) | 91412..91870 | - | 459 | WP_058967993.1 | hypothetical protein | - |
| HZS92_RS23535 | 92000..92431 | + | 432 | WP_236730926.1 | hypothetical protein | - |
| HZS92_RS23235 (HZS92_07119) | 92524..93381 | - | 858 | WP_057675716.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| HZS92_RS23240 (HZS92_07120) | 93374..94288 | - | 915 | WP_057675718.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|