MGE detailed information
MGE type: Genomic_island MGE length: 26522 bp
Accession: NZ_CP059999 Location: 2808235..2834756 Organism: Xanthomonas citri pv. citri strain B2 Replicon: chromosome
Accession: NZ_CP059999 Location: 2808235..2834756 Organism: Xanthomonas citri pv. citri strain B2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZS92_RS12285 (HZS92_02583) | 2805157..2805333 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| HZS92_RS12290 (HZS92_02584) | 2805553..2805954 | + | 402 | WP_003485983.1 | H-NS family nucleoid-associated regulatory protein | - |
| HZS92_RS12300 (HZS92_02586) | 2806243..2807334 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| HZS92_RS12305 (HZS92_02588) | 2808274..2810406 | + | 2133 | WP_234336958.1 | DotA/TraY family protein | - |
| HZS92_RS12310 (HZS92_02589) | 2810416..2810937 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| HZS92_RS12315 (HZS92_02591) | 2811802..2812758 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| HZS92_RS12320 (HZS92_02592) | 2812825..2813958 | - | 1134 | Protein_2409 | IS5 family transposase ISXo4 | Transposase |
| HZS92_RS12330 (HZS92_02594) | 2815298..2815552 | - | 255 | WP_223293127.1 | hypothetical protein | - |
| HZS92_RS23575 | 2815621..2815755 | - | 135 | WP_011051575.1 | hypothetical protein | - |
| HZS92_RS12335 (HZS92_02595) | 2815748..2816062 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| HZS92_RS12340 (HZS92_02596) | 2816065..2816316 | - | 252 | WP_230598886.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HZS92_RS12345 (HZS92_02597) | 2816343..2816621 | - | 279 | WP_040259533.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| HZS92_RS12350 (HZS92_02598) | 2816791..2818059 | - | 1269 | Protein_2416 | Tn3 family transposase ISPsy42 | Transposase |
| HZS92_RS12355 (HZS92_02599) | 2818108..2819333 | + | 1226 | Protein_2417 | IS3 family transposase ISJsp1 | Transposase |
| HZS92_RS12360 (HZS92_02600) | 2819970..2820677 | + | 708 | Protein_2418 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HZS92_RS12365 (HZS92_02601) | 2820999..2823206 | + | 2208 | WP_234705904.1 | AAA family ATPase | - |
| HZS92_RS12370 (HZS92_02602) | 2823257..2823445 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| HZS92_RS12375 (HZS92_02603) | 2823442..2825028 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| HZS92_RS12380 (HZS92_02604) | 2825025..2825942 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| HZS92_RS12385 (HZS92_02605) | 2825951..2826280 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| HZS92_RS12390 (HZS92_02606) | 2826387..2826794 | + | 408 | Protein_2424 | plasmid pRiA4b ORF-3 family protein | - |
| HZS92_RS12400 (HZS92_02607) | 2827056..2827241 | - | 186 | WP_015463319.1 | hypothetical protein | - |
| HZS92_RS12405 (HZS92_02609) | 2827947..2828207 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| HZS92_RS12410 (HZS92_02610) | 2828606..2829607 | - | 1002 | WP_011051588.1 | replication protein RepA | - |
| HZS92_RS12415 (HZS92_02611) | 2829840..2830073 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| HZS92_RS12420 (HZS92_02612) | 2830652..2832046 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| HZS92_RS12425 (HZS92_02613) | 2832043..2834160 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| HZS92_RS12430 | 2834580..2834756 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| HZS92_RS12435 (HZS92_02614) | 2835039..2836145 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| HZS92_RS12440 (HZS92_02615) | 2836188..2836697 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| HZS92_RS12445 (HZS92_02616) | 2836709..2838367 | - | 1659 | WP_011051595.1 | methyl-accepting chemotaxis protein | - |
| HZS92_RS12450 (HZS92_02617) | 2838663..2839283 | + | 621 | WP_011051596.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |