MGE detailed information
MGE type: Genomic_island MGE length: 26521 bp
Accession: NZ_CP059992 Location: 2838848..2865368 Organism: Xanthomonas citri strain T4 Replicon: chromosome
Accession: NZ_CP059992 Location: 2838848..2865368 Organism: Xanthomonas citri strain T4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZS93_RS12420 (HZS93_02611) | 2835770..2835946 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| HZS93_RS12425 (HZS93_02612) | 2836166..2836567 | + | 402 | WP_003485983.1 | H-NS family nucleoid-associated regulatory protein | - |
| HZS93_RS12435 (HZS93_02614) | 2836856..2837947 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| HZS93_RS12440 (HZS93_02616) | 2838848..2841019 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| HZS93_RS12445 (HZS93_02617) | 2841029..2841550 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| HZS93_RS12450 | 2841989..2842129 | - | 141 | WP_157860651.1 | hypothetical protein | - |
| HZS93_RS12455 (HZS93_02619) | 2842415..2843371 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| HZS93_RS12460 (HZS93_02620) | 2843438..2844571 | - | 1134 | Protein_2443 | IS5 family transposase ISXo4 | Transposase |
| HZS93_RS12470 (HZS93_02622) | 2845911..2846165 | - | 255 | WP_223293127.1 | hypothetical protein | - |
| HZS93_RS24620 | 2846234..2846368 | - | 135 | WP_011051575.1 | hypothetical protein | - |
| HZS93_RS12475 (HZS93_02623) | 2846361..2846675 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| HZS93_RS12480 (HZS93_02624) | 2846678..2846929 | - | 252 | WP_230598886.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HZS93_RS12485 (HZS93_02625) | 2846956..2847234 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| HZS93_RS12490 (HZS93_02626) | 2847404..2848672 | - | 1269 | Protein_2450 | Tn3 family transposase ISPsy42 | Transposase |
| HZS93_RS12495 (HZS93_02627) | 2848721..2849946 | + | 1226 | Protein_2451 | IS3 family transposase ISJsp1 | Transposase |
| HZS93_RS12500 (HZS93_02628) | 2850582..2851289 | + | 708 | Protein_2452 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HZS93_RS12505 (HZS93_02629) | 2851710..2853818 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| HZS93_RS12510 (HZS93_02630) | 2853869..2854057 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| HZS93_RS12515 (HZS93_02631) | 2854054..2855640 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| HZS93_RS12520 (HZS93_02632) | 2855637..2856554 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| HZS93_RS12525 (HZS93_02633) | 2856563..2856892 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| HZS93_RS12530 (HZS93_02634) | 2856999..2857406 | + | 408 | Protein_2458 | plasmid pRiA4b ORF-3 family protein | - |
| HZS93_RS12540 (HZS93_02635) | 2857668..2857853 | - | 186 | WP_015463319.1 | hypothetical protein | - |
| HZS93_RS12545 (HZS93_02637) | 2858559..2858819 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| HZS93_RS12550 (HZS93_02638) | 2859218..2860219 | - | 1002 | WP_011051588.1 | replication protein RepA | - |
| HZS93_RS12555 (HZS93_02639) | 2860452..2860685 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| HZS93_RS12560 (HZS93_02640) | 2861264..2862658 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| HZS93_RS12565 (HZS93_02641) | 2862655..2864772 | + | 2118 | WP_011051591.1 | ATP-binding protein | - |
| HZS93_RS12570 | 2865192..2865368 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| HZS93_RS12575 (HZS93_02642) | 2865651..2866757 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| HZS93_RS12580 (HZS93_02643) | 2866800..2867309 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| HZS93_RS12585 (HZS93_02644) | 2867321..2868979 | - | 1659 | WP_011051595.1 | methyl-accepting chemotaxis protein | - |
| HZS93_RS12590 (HZS93_02645) | 2869275..2869895 | + | 621 | WP_011051596.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |