MGE detailed information
MGE type: Prophage MGE length: 35571 bp
Accession: NZ_CP059957 Location: 1372..36942 Organism: Pectobacterium brasiliense strain IPO:4071 NAK:240 Replicon: chromosome
Accession: NZ_CP059957 Location: 1372..36942 Organism: Pectobacterium brasiliense strain IPO:4071 NAK:240 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5A30_RS00005 () | 527..949 | - | 423 | WP_012822396.1 | phage tail protein | - |
| H5A30_RS00010 () | 1372..1671 | - | 300 | WP_205530077.1 | tail fiber protein | - |
| H5A30_RS00015 () | 1971..2392 | - | 422 | Protein_2 | tail fiber protein | - |
| H5A30_RS00020 () | 2428..3579 | - | 1152 | Protein_3 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| H5A30_RS00025 () | 3593..4246 | - | 654 | WP_102118375.1 | prepilin peptidase | - |
| H5A30_RS00030 () | 4243..4761 | - | 519 | WP_102118376.1 | Membrane-bound lytic murein transglycosylase C | VF |
| H5A30_RS00035 () | 4770..5366 | - | 597 | WP_012822390.1 | hypothetical protein | VF |
| H5A30_RS00040 () | 5423..6589 | - | 1167 | WP_109491850.1 | type II secretion system F family protein | - |
| H5A30_RS00045 () | 6592..8151 | - | 1560 | WP_102118378.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H5A30_RS00050 () | 8151..8660 | - | 510 | WP_102118379.1 | type IV pilus biogenesis protein PilP | - |
| H5A30_RS00055 () | 8657..9964 | - | 1308 | WP_102118380.1 | type 4b pilus protein PilO2 | - |
| H5A30_RS00060 () | 9975..11639 | - | 1665 | WP_109491851.1 | Outer membrane lipoprotein BfpB | VF |
| H5A30_RS00065 () | 11649..12095 | - | 447 | WP_012822383.1 | hypothetical protein | VF |
| H5A30_RS00070 () | 12095..13444 | - | 1350 | WP_103157529.1 | hypothetical protein | VF |
| H5A30_RS00075 () | 13595..14032 | - | 438 | WP_039512823.1 | DUF29 domain-containing protein | - |
| H5A30_RS00080 () | 14104..14688 | - | 585 | WP_103157530.1 | hypothetical protein | - |
| H5A30_RS00085 () | 14792..15340 | - | 549 | WP_012822379.1 | single-stranded DNA-binding protein | - |
| H5A30_RS00090 () | 15400..15909 | - | 510 | WP_012822378.1 | DUF3577 domain-containing protein | - |
| H5A30_RS00095 () | 16544..18553 | - | 2010 | WP_109491853.1 | DNA topoisomerase III | - |
| H5A30_RS00100 () | 18568..19320 | - | 753 | WP_107168173.1 | TIGR03761 family integrating conjugative element protein | - |
| H5A30_RS00105 () | 19815..21095 | - | 1281 | WP_109491854.1 | helix-turn-helix domain-containing protein | - |
| H5A30_RS00110 () | 21092..21337 | - | 246 | WP_125233391.1 | hypothetical protein | - |
| H5A30_RS00115 () | 21334..21531 | - | 198 | WP_012822373.1 | hypothetical protein | - |
| H5A30_RS00120 () | 21528..21758 | - | 231 | WP_012822372.1 | hypothetical protein | - |
| H5A30_RS00125 () | 21760..22341 | - | 582 | WP_012822371.1 | DUF2857 domain-containing protein | - |
| H5A30_RS00130 () | 22447..23112 | - | 666 | WP_012822369.1 | hypothetical protein | - |
| H5A30_RS00135 () | 23109..23348 | - | 240 | WP_109491856.1 | TraR/DksA C4-type zinc finger protein | - |
| H5A30_RS00140 () | 23338..25062 | - | 1725 | WP_109491857.1 | ParB family protein | - |
| H5A30_RS00145 () | 25062..26423 | - | 1362 | WP_109491858.1 | replicative DNA helicase | - |
| H5A30_RS00150 () | 26416..26805 | - | 390 | WP_125233392.1 | hypothetical protein | - |
| H5A30_RS00155 () | 26802..27689 | - | 888 | WP_109491861.1 | Tyrosine-protein kinase CpsD | VF |
| H5A30_RS00160 () | 27978..29240 | + | 1263 | WP_119871150.1 | Prophage integrase IntS ; Integrase | Integrase |
| H5A30_RS00165 () | 29356..29550 | - | 195 | WP_044209559.1 | DUF3950 domain-containing protein | - |
| H5A30_RS00170 () | 29736..30077 | + | 342 | WP_119871225.1 | hypothetical protein | - |
| H5A30_RS00175 () | 30531..30881 | - | 351 | WP_158586005.1 | hypothetical protein | - |
| H5A30_RS00180 () | 30974..31716 | + | 743 | Protein_35 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| H5A30_RS00185 () | 31775..31993 | + | 219 | WP_015855076.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| H5A30_RS00190 () | 31996..32301 | + | 306 | WP_119871147.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| H5A30_RS00195 () | 32501..33343 | - | 843 | WP_119871146.1 | DNA adenine methylase | - |
| H5A30_RS00200 () | 33429..35150 | - | 1722 | WP_119871145.1 | AAA family ATPase | - |
| H5A30_RS00205 () | 35576..36070 | - | 495 | WP_119871144.1 | GNAT family N-acetyltransferase | Toxin Detail |
| H5A30_RS00210 () | 36067..36360 | - | 294 | WP_038921611.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| H5A30_RS00215 () | 36700..36942 | - | 243 | WP_072010299.1 | helix-turn-helix domain-containing protein | - |
| H5A30_RS00220 () | 37046..37300 | + | 255 | WP_119871224.1 | helix-turn-helix domain-containing protein | - |
| H5A30_RS00225 () | 37385..37633 | + | 249 | WP_119871143.1 | helix-turn-helix domain-containing protein | - |
| H5A30_RS00230 () | 38286..40040 | - | 1755 | WP_119871142.1 | AIPR family protein | - |
| H5A30_RS00235 () | 40268..41053 | - | 786 | WP_185893700.1 | phosphonate metabolism protein PhnP | - |
| H5A30_RS00240 () | 41092..41661 | - | 570 | WP_119871141.1 | ribose 1,5-bisphosphokinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|