NZ_CP059851253265..468649

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 215385 bp
Accession: NZ_CP059851        Location: 253265..468649         Organism: Sandaracinobacter sp. M6       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
H3309_RS01205 () 250662..254192 + 3531 WP_182296766.1 double-strand break repair helicase AddA -
H3309_RS01210 () 254238..254561 + 324 WP_182296768.1 Thioredoxin VF
H3309_RS01215 () 254608..255345 - 738 WP_182296770.1 DUF4019 domain-containing protein -
H3309_RS01220 () 255414..256274 - 861 WP_182296772.1 glutathione S-transferase family protein -
H3309_RS01225 () 256480..256626 + 147 WP_182296774.1 hypothetical protein -
H3309_RS01230 () 256846..257580 - 735 WP_182296777.1 hypothetical protein -
H3309_RS01235 () 257761..257949 - 189 WP_182296779.1 Leukotoxin export protein LtxD VF
H3309_RS01240 () 258531..259820 - 1290 WP_182296780.1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase -
H3309_RS01245 () 259942..262728 + 2787 WP_182296782.1 preprotein translocase subunit SecA -
H3309_RS01250 () 262766..263134 - 369 WP_182296784.1 DUF423 domain-containing protein -
H3309_RS01255 () 263131..263751 - 621 WP_182296786.1 DUF2306 domain-containing protein -
H3309_RS01260 () 264035..265816 + 1782 WP_182298408.1 DUF2075 domain-containing protein -
H3309_RS01265 () 265813..266592 + 780 WP_207791539.1 enoyl-CoA hydratase -
H3309_RS01270 () 266661..267929 + 1269 WP_182296788.1 amidohydrolase family protein -
H3309_RS01275 () 268178..268549 + 372 WP_182298412.1 30S ribosomal protein S12 -
H3309_RS01280 () 268562..269032 + 471 WP_182296790.1 30S ribosomal protein S7 -
H3309_RS01285 () 269063..271135 + 2073 WP_182296792.1 elongation factor G -
H3309_RS01290 () 271186..272376 + 1191 WP_182296794.1 Elongation factor Tu VF
H3309_RS01295 () 272484..272798 + 315 WP_182296796.1 30S ribosomal protein S10 -
H3309_RS01300 () 272898..273638 + 741 WP_182296798.1 50S ribosomal protein L3 -
H3309_RS01305 () 273635..274258 + 624 WP_182296799.1 50S ribosomal protein L4 -
H3309_RS01310 () 274251..274565 + 315 WP_182296800.1 50S ribosomal protein L23 -
H3309_RS01315 () 274570..275406 + 837 WP_182296801.1 50S ribosomal protein L2 -
H3309_RS01320 () 275412..275675 + 264 WP_182296802.1 30S ribosomal protein S19 -
H3309_RS01325 () 275678..276067 + 390 WP_182296803.1 50S ribosomal protein L22 -
H3309_RS01330 () 276070..276765 + 696 WP_182296804.1 30S ribosomal protein S3 -
H3309_RS01335 () 276823..277251 + 429 WP_182296806.1 50S ribosomal protein L16 -
H3309_RS01340 () 277256..277462 + 207 WP_182296808.1 50S ribosomal protein L29 -
H3309_RS01345 () 277474..277710 + 237 WP_182296810.1 30S ribosomal protein S17 -
H3309_RS01350 () 277712..278080 + 369 WP_182296812.1 50S ribosomal protein L14 -
H3309_RS01355 () 278080..278400 + 321 WP_207791540.1 50S ribosomal protein L24 -
H3309_RS01360 () 278393..278998 + 606 WP_182296814.1 50S ribosomal protein L5 -
H3309_RS01365 () 279018..279323 + 306 WP_182296816.1 30S ribosomal protein S14 -
H3309_RS01370 () 279333..279731 + 399 WP_182296818.1 30S ribosomal protein S8 -
H3309_RS01375 () 279733..280266 + 534 WP_182296820.1 50S ribosomal protein L6 -
H3309_RS01380 () 280266..280616 + 351 WP_182296822.1 50S ribosomal protein L18 -
H3309_RS01385 () 280620..281330 + 711 WP_182296824.1 30S ribosomal protein S5 -
H3309_RS01390 () 281342..281554 + 213 WP_182296826.1 50S ribosomal protein L30 -
H3309_RS01395 () 281740..282216 + 477 WP_182296828.1 50S ribosomal protein L15 -
H3309_RS01400 () 282294..283661 + 1368 WP_182296830.1 preprotein translocase subunit SecY -
H3309_RS01405 () 283708..284358 + 651 WP_182298416.1 adenylate kinase -
H3309_RS01410 () 284515..284883 + 369 WP_182296832.1 30S ribosomal protein S13 -
H3309_RS01415 () 284883..285272 + 390 WP_182296834.1 30S ribosomal protein S11 -
H3309_RS01420 () 285353..286408 + 1056 WP_182296836.1 DNA-directed RNA polymerase subunit alpha -
H3309_RS01425 () 286624..287046 + 423 WP_182296838.1 50S ribosomal protein L17 -
H3309_RS01430 () 287133..287819 + 687 WP_182296840.1 class I SAM-dependent methyltransferase -
H3309_RS01435 () 287819..288952 + 1134 WP_182296842.1 Long-chain-alcohol dehydrogenase 1 VF
H3309_RS01440 () 288962..289399 + 438 WP_182296844.1 acyl-CoA thioesterase -
H3309_RS01445 () 289481..290098 + 618 WP_182296846.1 hypothetical protein -
H3309_RS01450 () 290136..291689 + 1554 WP_182296848.1 glutamine-hydrolyzing GMP synthase -
H3309_RS01455 () 291984..293240 + 1257 WP_182296850.1 Prophage integrase IntA ; Integrase Integrase
H3309_RS01460 () 293218..293490 - 273 WP_182296851.1 AlpA family phage regulatory protein -
H3309_RS01465 () 293874..295274 - 1401 WP_182296852.1 PLP-dependent aminotransferase family protein -
H3309_RS01470 () 295471..295701 + 231 WP_182296853.1 hypothetical protein -
H3309_RS01475 () 295698..298160 + 2463 WP_182296854.1 NAD(P)H-dependent oxidoreductase -
H3309_RS01480 () 298160..298597 + 438 WP_182296855.1 DUF2214 family protein -
H3309_RS01485 () 298693..298923 + 231 WP_182296856.1 hypothetical protein -
H3309_RS01490 () 299089..300057 + 969 WP_182296858.1 HTH-type transcriptional regulator GltC VF
H3309_RS01495 () 299984..300229 - 246 WP_182296860.1 DUF2274 domain-containing protein -
H3309_RS01500 () 300229..301353 - 1125 WP_207791588.1 Type IV secretion system protein virB10 VF
H3309_RS01505 () 301425..302405 - 981 WP_182296864.1 P-type conjugative transfer protein TrbG -
H3309_RS01510 () 302402..303091 - 690 WP_182296866.1 conjugal transfer protein TrbF -
H3309_RS01515 () 303088..304437 - 1350 WP_182296868.1 hypothetical protein VF
H3309_RS01520 () 304441..304722 - 282 WP_182296870.1 putative entry exclusion protein TrbK-alt -
H3309_RS01525 () 304733..305494 - 762 WP_182296872.1 P-type conjugative transfer protein TrbJ -
H3309_RS01530 () 305491..307929 - 2439 WP_182296874.1 conjugal transfer protein TrbE -
H3309_RS01535 () 307939..308220 - 282 WP_062765738.1 VirB3 family type IV secretion system protein -
H3309_RS01540 () 308220..308552 - 333 WP_035599872.1 TrbC/VirB2 family protein -
H3309_RS01545 () 308549..309538 - 990 WP_182296876.1 Type IV secretion system protein VirB11 VF
H3309_RS01550 () 309841..310083 + 243 WP_182296878.1 helix-turn-helix transcriptional regulator Antitoxin Detail
H3309_RS01555 () 310080..311348 + 1269 WP_182296880.1 type II toxin-antitoxin system HipA family toxin Toxin Detail
H3309_RS01560 () 311504..312304 + 801 WP_182296882.1 alpha/beta hydrolase -
H3309_RS01565 () 312348..312794 - 447 WP_182296884.1 YdeI/OmpD-associated family protein -
H3309_RS01570 () 312851..313069 - 219 WP_182296886.1 DUF4287 domain-containing protein -
H3309_RS01575 () 313130..313498 - 369 WP_182296888.1 DoxX family protein -
H3309_RS01580 () 313588..314205 - 618 WP_182296890.1 HTH-type transcriptional regulator BetI VF
H3309_RS01585 () 314443..314865 - 423 WP_182296892.1 ribbon-helix-helix domain-containing protein -
H3309_RS01590 () 314873..316861 - 1989 WP_182296894.1 Conjugal transfer protein TraG VF
H3309_RS01595 () 316889..318652 - 1764 WP_182296896.1 DUF3363 domain-containing protein -
H3309_RS01600 () 318900..319664 - 765 WP_182296898.1 lytic transglycosylase domain-containing protein -
H3309_RS01605 () 319668..320006 - 339 WP_182296900.1 DUF736 domain-containing protein -
H3309_RS01610 () 320052..320597 - 546 WP_182296902.1 S26 family signal peptidase -
H3309_RS01615 () 320594..321109 - 516 WP_182296904.1 DUF2840 domain-containing protein -
H3309_RS01620 () 321106..321345 - 240 WP_182296906.1 hypothetical protein -
H3309_RS01625 () 321342..321980 - 639 WP_182296908.1 Chromosome-partitioning ATPase Soj VF
H3309_RS01630 () 321977..323038 - 1062 WP_182296910.1 replication initiator protein A -
H3309_RS01635 () 323049..323330 - 282 WP_011579870.1 helix-turn-helix domain-containing protein -
H3309_RS01640 () 323580..324002 + 423 WP_207791541.1 hypothetical protein -
H3309_RS01645 () 324113..324619 - 507 WP_207791542.1 DUF2285 domain-containing protein -
H3309_RS01650 () 324564..324887 - 324 WP_182296914.1 hypothetical protein -
H3309_RS01655 () 325003..325269 - 267 WP_182296917.1 DUF2285 domain-containing protein -
H3309_RS01660 () 325368..325631 - 264 WP_182296919.1 helix-turn-helix transcriptional regulator -
H3309_RS01665 () 325821..326147 - 327 WP_182296921.1 DUF736 domain-containing protein -
H3309_RS01670 () 326758..327198 - 441 WP_182296923.1 hypothetical protein -
H3309_RS01675 () 327340..327504 - 165 WP_182296925.1 hypothetical protein -
H3309_RS01680 () 328161..328862 + 702 WP_182296927.1 aspartate/glutamate racemase family protein -
H3309_RS01685 () 328906..329826 - 921 WP_182296929.1 NAD-dependent epimerase/dehydratase family protein -
H3309_RS01690 () 329835..330821 - 987 WP_182296931.1 NADPH:quinone reductase -
H3309_RS01695 () 330916..331254 + 339 WP_182296933.1 helix-turn-helix transcriptional regulator -
H3309_RS01700 () 331352..332275 - 924 WP_182296935.1 DUF2493 domain-containing protein -
H3309_RS01705 () 332630..333691 - 1062 WP_182296937.1 toprim domain-containing protein -
H3309_RS01710 () 333691..338025 - 4335 WP_182296939.1 strawberry notch family protein -
H3309_RS01715 () 338144..338788 - 645 WP_182296941.1 antitoxin of toxin-antitoxin stability system -
H3309_RS01720 () 338781..339197 - 417 WP_182296942.1 hypothetical protein -
H3309_RS01725 () 339303..341447 - 2145 WP_182296944.1 ParB/RepB/Spo0J family partition protein -
H3309_RS01730 () 341608..342576 - 969 WP_182296946.1 DUF1738 domain-containing protein -
H3309_RS01735 () 343083..345041 + 1959 WP_182296948.1 ATP-binding protein -
H3309_RS01740 () 345230..345904 + 675 WP_182296950.1 hypothetical protein -
H3309_RS01745 () 345908..347620 + 1713 WP_182296952.1 ATP-binding protein -
H3309_RS01750 () 347691..349718 + 2028 WP_182296954.1 DUF4338 domain-containing protein -
H3309_RS01755 () 349860..350420 + 561 WP_207791543.1 AbiEi antitoxin N-terminal domain-containing protein Antitoxin Detail
H3309_RS01760 () 350413..351288 + 876 WP_182296958.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin Detail
H3309_RS01765 () 351764..351970 + 207 WP_182296960.1 hypothetical protein -
H3309_RS01770 () 352041..353138 + 1098 WP_182296962.1 ester cyclase -
H3309_RS01775 () 353197..354360 + 1164 WP_182296964.1 MFS transporter -
H3309_RS01780 () 354536..357373 - 2838 WP_182296966.1 Pesticin receptor VF
H3309_RS01785 () 357540..358613 + 1074 WP_182296968.1 LacI family transcriptional regulator -
H3309_RS01790 () 358920..360080 + 1161 WP_182296970.1 two-component sensor histidine kinase -
H3309_RS01795 () 360089..360691 + 603 WP_182298419.1 Transcriptional regulatory protein DesR VF
H3309_RS01800 () 360704..362083 - 1380 WP_182296972.1 hypothetical protein -
H3309_RS01805 () 362080..363312 - 1233 WP_182296974.1 YcaO-like family protein -
H3309_RS01810 () 363316..364710 - 1395 WP_182296976.1 molybdopterin-synthase adenylyltransferase MoeB -
H3309_RS01815 () 364695..365138 - 444 WP_182296978.1 Mov34/MPN/PAD-1 family protein -
H3309_RS01820 () 365119..365811 - 693 WP_182296980.1 putative ABC transporter ATP-binding protein YknY VF
H3309_RS01825 () 365844..366911 - 1068 WP_182296982.1 efflux RND transporter periplasmic adaptor subunit -
H3309_RS01830 () 366915..368123 - 1209 WP_182296984.1 ABC transporter permease -
H3309_RS01835 () 368120..369283 - 1164 WP_182296986.1 ABC transporter permease -
H3309_RS01840 () 369280..370176 - 897 WP_182296988.1 thiopeptide-type bacteriocin biosynthesis protein -
H3309_RS01845 () 370173..371657 - 1485 WP_182296990.1 hypothetical protein -
H3309_RS01850 () 371654..373570 - 1917 WP_182296991.1 TOMM precursor leader peptide-binding protein -
H3309_RS01855 () 373567..375378 - 1812 WP_182296992.1 hypothetical protein -
H3309_RS01860 () 375384..379175 - 3792 WP_182296993.1 lantibiotic dehydratase -
H3309_RS01865 () 379172..379927 - 756 WP_182296994.1 ABC transporter permease -
H3309_RS01870 () 379924..380775 - 852 WP_182296995.1 ABC transporter ATP-binding protein -
H3309_RS01875 () 380867..381055 - 189 WP_182296996.1 thiazolylpeptide-type bacteriocin -
H3309_RS01880 () 381154..381582 - 429 WP_182296998.1 DUF2141 domain-containing protein -
H3309_RS01890 () 381931..382680 - 750 WP_182297000.1 hypothetical protein -
H3309_RS01895 () 382725..383489 - 765 WP_182297002.1 siroheme synthase -
H3309_RS01900 () 383489..384358 - 870 WP_182297004.1 UTP--glucose-1-phosphate uridylyltransferase VF
H3309_RS01905 () 384355..385626 - 1272 WP_182297006.1 diaminopimelate decarboxylase -
H3309_RS01910 () 385626..385892 - 267 WP_182297008.1 hypothetical protein -
H3309_RS01915 () 385889..387253 - 1365 WP_182298421.1 argininosuccinate lyase -
H3309_RS01920 () 387282..387848 + 567 WP_182297009.1 TlpA family protein disulfide reductase -
H3309_RS01925 () 387834..388511 - 678 WP_182298423.1 Superoxide dismutase [Mn] VF
H3309_RS01930 () 389365..389460 + 96 Protein_383 PEPxxWA-CTERM sorting domain-containing protein -
H3309_RS01935 () 389681..390376 + 696 WP_182297011.1 flavin reductase family protein -
H3309_RS01940 () 390420..391496 + 1077 WP_182297013.1 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada -
H3309_RS01945 () 391559..392194 + 636 WP_182298425.1 2OG-Fe(II) oxygenase -
H3309_RS01950 () 392309..392959 + 651 WP_182297015.1 DUF2807 domain-containing protein -
H3309_RS01955 () 393011..393700 - 690 WP_182297017.1 SIMPL domain-containing protein -
H3309_RS01960 () 393786..394040 - 255 WP_182297019.1 GlsB/YeaQ/YmgE family stress response membrane protein -
H3309_RS01965 () 394246..395421 + 1176 WP_182297021.1 efflux RND transporter periplasmic adaptor subunit -
H3309_RS01970 () 395432..398512 + 3081 WP_182297022.1 efflux RND transporter permease subunit -
H3309_RS01975 () 398457..399725 + 1269 WP_182297025.1 DUF445 domain-containing protein -
H3309_RS01980 () 399750..400703 + 954 WP_207791544.1 MBL fold metallo-hydrolase -
H3309_RS01985 () 400709..403846 - 3138 WP_182297027.1 CusA/CzcA family heavy metal efflux RND transporter -
H3309_RS01990 () 403850..404977 - 1128 WP_182297029.1 efflux RND transporter periplasmic adaptor subunit -
H3309_RS01995 () 404977..406245 - 1269 WP_182297031.1 TolC family protein -
H3309_RS02000 () 406330..406854 - 525 WP_182297033.1 hypothetical protein -
H3309_RS02005 () 406942..407946 + 1005 WP_182297035.1 D-glycerate dehydrogenase -
H3309_RS02010 () 407962..410241 + 2280 WP_182297037.1 patatin-like protein -
H3309_RS02015 () 410252..411478 + 1227 WP_182297039.1 serine hydrolase -
H3309_RS02020 () 411482..411877 - 396 WP_182297041.1 type II toxin-antitoxin system VapC family toxin -
H3309_RS02025 () 411874..412143 - 270 WP_182297043.1 type II toxin-antitoxin system prevent-host-death family antitoxin -
H3309_RS02030 () 412360..413130 - 771 WP_182297046.1 7-alpha-hydroxysteroid dehydrogenase VF
H3309_RS02035 () 413220..414404 + 1185 WP_182297048.1 MFS transporter -
H3309_RS02040 () 414401..414652 + 252 WP_182297050.1 hypothetical protein -
H3309_RS02045 () 414581..415285 - 705 WP_182297052.1 DUF1211 domain-containing protein -
H3309_RS02050 () 415366..415893 + 528 WP_182297054.1 Diguanylate cyclase DgcM VF
H3309_RS02055 () 415997..417211 + 1215 WP_182297056.1 hypothetical protein -
H3309_RS02060 () 417290..418768 + 1479 WP_182298429.1 circularly permuted type 2 ATP-grasp protein -
H3309_RS02065 () 418786..419160 - 375 WP_182297057.1 helix-turn-helix domain-containing protein -
H3309_RS02070 () 419170..419421 - 252 WP_182297059.1 type II toxin-antitoxin system RelE/ParE family toxin -
H3309_RS02075 () 419483..420427 + 945 WP_182298430.1 alpha-E domain-containing protein -
H3309_RS02080 () 420440..421267 + 828 WP_182297061.1 transglutaminase family protein -
H3309_RS02085 () 421272..422015 + 744 WP_182297063.1 peptidase -
H3309_RS02090 () 422078..422386 + 309 WP_182297065.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein -
H3309_RS02095 () 422390..422773 + 384 WP_182297067.1 type II toxin-antitoxin system VapC family toxin -
H3309_RS02100 () 422848..422982 + 135 WP_182297069.1 50S ribosomal protein L34 -
H3309_RS02105 () 423000..423314 + 315 WP_182297071.1 ribonuclease P protein component -
H3309_RS02110 () 423317..423529 + 213 WP_182298432.1 membrane protein insertion efficiency factor YidD -
H3309_RS02115 () 423547..425346 + 1800 WP_182297073.1 membrane protein insertase YidC -
H3309_RS02120 () 425348..425986 + 639 WP_182298434.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
H3309_RS02125 () 426078..427496 + 1419 WP_182297075.1 nitronate monooxygenase -
H3309_RS02130 () 427549..427776 + 228 WP_207791589.1 type II toxin-antitoxin system ParD family antitoxin -
H3309_RS02135 () 427773..428096 + 324 WP_182297079.1 type II toxin-antitoxin system RelE/ParE family toxin -
H3309_RS02140 () 428111..428905 - 795 WP_182297081.1 Dihydroanticapsin 7-dehydrogenase VF
H3309_RS02145 () 428992..430359 + 1368 WP_182298436.1 DNA repair protein RadA -
H3309_RS02150 () 430497..431366 + 870 WP_182297083.1 hypothetical protein -
H3309_RS02155 () 431363..431968 + 606 WP_182297085.1 CvpA family protein -
H3309_RS02160 () 431965..433422 + 1458 WP_182297087.1 cysteine--tRNA ligase -
H3309_RS02165 () 433458..434246 - 789 WP_182297089.1 polysaccharide deacetylase family protein -
H3309_RS02170 () 434253..435629 - 1377 WP_207791545.1 HAMP domain-containing protein -
H3309_RS02175 () 435634..436374 - 741 WP_207791546.1 Transcriptional regulatory protein OmpR VF
H3309_RS02180 () 436773..438182 + 1410 WP_182297093.1 Toluene efflux pump outer membrane protein TtgC VF
H3309_RS02185 () 438179..439447 + 1269 WP_207791547.1 efflux RND transporter periplasmic adaptor subunit -
H3309_RS02190 () 439447..440184 + 738 WP_182297095.1 putative ABC transporter ATP-binding protein YknY VF
H3309_RS02195 () 440178..441401 + 1224 WP_182297097.1 ABC transporter permease -
H3309_RS02200 () 441440..442657 + 1218 WP_182297099.1 cation:proton antiporter -
H3309_RS02205 () 442654..444006 - 1353 WP_182297101.1 DNA photolyase family protein -
H3309_RS02210 () 444065..444946 + 882 WP_182297103.1 D-amino-acid transaminase -
H3309_RS02215 () 444927..445445 - 519 WP_182297105.1 GNAT family N-acetyltransferase -
H3309_RS02220 () 445447..446031 - 585 WP_182297107.1 HD domain-containing protein -
H3309_RS02225 () 446687..448150 - 1464 WP_182297108.1 sodium/solute symporter -
H3309_RS02230 () 448320..448895 + 576 WP_182297109.1 Outer membrane protein P5 VF
H3309_RS02235 () 449071..450849 + 1779 WP_182297110.1 ShlB/FhaC/HecB family hemolysin secretion/activation protein -
H3309_RS02240 () 450861..466856 + 15996 WP_182297111.1 filamentous hemagglutinin N-terminal domain-containing protein -
H3309_RS02245 () 466853..470017 + 3165 WP_182297112.1 CHAT domain-containing protein -
H3309_RS02250 () 470029..471207 + 1179 WP_182297114.1 type VI secretion system ImpA family N-terminal domain-containing protein -
H3309_RS02255 () 471276..471785 + 510 WP_182297116.1 type VI secretion system contractile sheath small subunit -
H3309_RS02260 () 471833..473326 + 1494 WP_182298439.1 type VI secretion system contractile sheath large subunit -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance