MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82387 bp
Accession: NZ_CP059839 Location: 1..82387 Organism: Escherichia coli strain tcmA_3 Replicon: plasmid p0A3_5
Accession: NZ_CP059839 Location: 1..82387 Organism: Escherichia coli strain tcmA_3 Replicon: plasmid p0A3_5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQF93_RS27300 (699) | 699..908 | + | 210 | WP_285899588.1 | PapB/FocB family fimbrial expression transcriptional regulator | - |
| GQF93_RS27305 (1351) | 1351..3165 | + | 1815 | Protein_1 | Heme/hemopexin transporter protein HuxB | VF |
| GQF93_RS28175 (3255) | 3255..5817 | + | 2563 | Protein_2 | hypothetical protein | VF |
| GQF93_RS27315 (9823) | 9823..11733 | + | 1911 | WP_112020351.1 | UDP-glucose:protein N-beta-glucosyltransferase | VF |
| GQF93_RS27320 (11730) | 11730..12224 | + | 495 | WP_086590360.1 | DUF2919 family protein | - |
| GQF93_RS27325 (12205) | 12205..12564 | + | 360 | WP_089616863.1 | Transcriptional regulatory protein RcsB | VF |
| GQF93_RS27330 (13094) | 13094..13303 | + | 210 | WP_130549488.1 | hypothetical protein | - |
| GQF93_RS28180 (13628) | 13628..13999 | + | 372 | WP_214679162.1 | hypothetical protein | - |
| GQF93_RS27335 (14011) | 14011..14277 | + | 267 | WP_244565249.1 | FkbM family methyltransferase | - |
| GQF93_RS27340 (14807) | 14807..15397 | - | 591 | WP_212487737.1 | hypothetical protein | - |
| GQF93_RS27345 (15663) | 15663..17207 | + | 1545 | Protein_10 | IS21-like element ISEc12 family transposase | - |
| GQF93_RS27350 (17222) | 17222..17969 | + | 748 | Protein_11 | IS21-like element ISEc12 family helper ATPase IstB | - |
| GQF93_RS28185 (18051) | 18051..18158 | - | 108 | Protein_12 | hypothetical protein | - |
| GQF93_RS27355 (21218) | 21218..21364 | + | 147 | WP_156838755.1 | hypothetical protein | - |
| GQF93_RS27360 (21354) | 21354..22118 | + | 765 | WP_086589771.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| GQF93_RS27365 (22345) | 22345..22491 | - | 147 | WP_156838754.1 | hypothetical protein | - |
| GQF93_RS27370 (22891) | 22891..23472 | + | 582 | WP_089566199.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| GQF93_RS27375 (23724) | 23724..24587 | + | 864 | WP_086589770.1 | alpha/beta fold hydrolase | - |
| GQF93_RS27380 (24704) | 24704..25489 | + | 786 | WP_086589769.1 | alpha/beta hydrolase | - |
| GQF93_RS27385 (25813) | 25813..29667 | + | 3855 | WP_086589767.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| GQF93_RS27390 (29781) | 29781..30002 | - | 222 | Protein_20 | IS3 family transposase ISKpn38 | Transposase |
| GQF93_RS27395 (30029) | 30029..30613 | - | 585 | WP_089569361.1 | hypothetical protein | - |
| GQF93_RS27400 (31191) | 31191..32120 | + | 930 | WP_244565244.1 | hypothetical protein | - |
| GQF93_RS27405 (32147) | 32147..32494 | + | 348 | WP_086590073.1 | hypothetical protein | - |
| GQF93_RS27410 (32620) | 32620..33429 | + | 810 | WP_089566127.1 | site-specific integrase | - |
| GQF93_RS28190 (33878) | 33878..34102 | - | 225 | Protein_25 | IS110 family transposase ISSm3 | Transposase |
| GQF93_RS27415 (34841) | 34841..35017 | - | 177 | WP_172823440.1 | hypothetical protein | - |
| GQF93_RS28195 (35029) | 35029..35595 | + | 567 | Protein_27 | integrase core domain-containing protein | - |
| GQF93_RS27425 (36045) | 36045..36668 | + | 624 | WP_157896685.1 | DsbA family protein | - |
| GQF93_RS27430 (36668) | 36668..37606 | + | 939 | WP_089566124.1 | hypothetical protein | - |
| GQF93_RS27435 (37617) | 37617..39677 | + | 2061 | WP_165467318.1 | cysteine peptidase family C39 domain-containing protein | - |
| GQF93_RS27440 (39691) | 39691..40848 | + | 1158 | WP_089540456.1 | Macrolide export protein MacA | VF |
| GQF93_RS27445 (40838) | 40838..42787 | + | 1950 | WP_212487739.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| GQF93_RS27450 (42784) | 42784..44145 | + | 1362 | WP_212487730.1 | TolC family protein | - |
| GQF93_RS27455 (44147) | 44147..45406 | + | 1260 | WP_089540463.1 | beta-ketoacyl-[acyl-carrier-protein] synthase family protein | - |
| GQF93_RS27460 (45403) | 45403..46188 | + | 786 | WP_212487732.1 | hypothetical protein | - |
| GQF93_RS27465 (46179) | 46179..46427 | + | 249 | WP_086625737.1 | Meromycolate extension acyl carrier protein | VF |
| GQF93_RS27470 (46424) | 46424..47155 | + | 732 | WP_089540467.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| GQF93_RS27475 (47452) | 47452..48560 | - | 1109 | Protein_38 | IS4 family transposase ISSfl9 | Transposase |
| GQF93_RS27480 (48883) | 48883..49677 | - | 795 | WP_212487733.1 | helix-turn-helix transcriptional regulator | - |
| GQF93_RS27485 (51155) | 51155..51376 | - | 222 | WP_212487735.1 | hypothetical protein | - |
| GQF93_RS27490 (51804) | 51804..52501 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| GQF93_RS27495 (52686) | 52686..52793 | + | 108 | Protein_42 | IS110 family transposase IS4321 | Transposase |
| GQF93_RS27500 (53231) | 53231..53749 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| GQF93_RS27505 (53768) | 53768..54598 | + | 831 | Protein_44 | ISL3 family transposase ISEc53 | Transposase |
| GQF93_RS27515 (55906) | 55906..56301 | + | 396 | Protein_46 | ISL3 family transposase ISEc53 | Transposase |
| GQF93_RS27520 (56368) | 56368..57107 | + | 740 | Protein_47 | tyrosine-type recombinase/integrase | - |
| GQF93_RS27525 (57386) | 57386..58363 | - | 978 | WP_086589904.1 | RepB family plasmid replication initiator protein | - |
| GQF93_RS27530 (59007) | 59007..59418 | - | 412 | Protein_49 | DDE-type integrase/transposase/recombinase | - |
| GQF93_RS27535 (59420) | 59420..59707 | - | 288 | WP_086589903.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GQF93_RS27540 (59704) | 59704..59955 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GQF93_RS27545 (60129) | 60129..60341 | - | 213 | WP_000402944.1 | hypothetical protein | - |
| GQF93_RS27550 (60715) | 60715..61920 | + | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| GQF93_RS27555 (61917) | 61917..62879 | + | 963 | WP_000756325.1 | ParB family protein | - |
| GQF93_RS27560 (63020) | 63020..63193 | - | 174 | Protein_55 | DUF4113 domain-containing protein | - |
| GQF93_RS27565 (63267) | 63267..63692 | + | 426 | WP_024193300.1 | antirestriction protein | - |
| GQF93_RS27570 (63729) | 63729..64885 | - | 1157 | Protein_57 | IS200-IS605 family transposase ISEc46 | Transposase |
| GQF93_RS27575 (65009) | 65009..65470 | + | 462 | WP_122985767.1 | DUF1380 family protein | - |
| GQF93_RS27580 (65470) | 65470..65661 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| GQF93_RS27585 (65658) | 65658..65831 | + | 174 | WP_156838764.1 | hypothetical protein | - |
| GQF93_RS27590 (65975) | 65975..67588 | - | 1614 | WP_212487743.1 | group II intron reverse transcriptase/maturase | - |
| GQF93_RS27595 (67661) | 67661..68837 | + | 1177 | Protein_62 | IS3 family transposase ISCfr6 | Transposase |
| GQF93_RS27600 (68847) | 68847..73058 | + | 4212 | Protein_63 | Multifunctional conjugation protein TraI | Relaxase |
| GQF93_RS27605 (73078) | 73078..73824 | + | 747 | WP_086590046.1 | conjugal transfer pilus acetylase TraX | - |
| GQF93_RS27610 (73879) | 73879..74439 | + | 561 | WP_086590048.1 | fertility inhibition protein FinO | - |
| GQF93_RS27615 (74574) | 74574..74762 | + | 189 | WP_086590050.1 | hypothetical protein | - |
| GQF93_RS27620 (74802) | 74802..75071 | - | 270 | Protein_67 | transposase | - |
| GQF93_RS27625 (75161) | 75161..75412 | + | 252 | Protein_68 | IS66 family transposase IS679 | Transposase |
| GQF93_RS27630 (75468) | 75468..76681 | + | 1214 | WP_165470991.1 | IS3 family transposase IS629 | Transposase |
| GQF93_RS27635 (76723) | 76723..77106 | + | 384 | Protein_70 | IS66 family transposase IS679 | Transposase |
| GQF93_RS27640 (77122) | 77122..77473 | + | 352 | Protein_71 | IS66 family insertion sequence element accessory protein TnpB | - |
| GQF93_RS27645 (77493) | 77493..79063 | + | 1571 | Protein_72 | IS66 family transposase ISCro1 | Transposase |
| GQF93_RS27650 (79816) | 79816..80673 | - | 858 | WP_086590296.1 | incFII family plasmid replication initiator RepA | - |
| GQF93_RS27655 (80666) | 80666..81148 | - | 483 | WP_170919306.1 | hypothetical protein | - |
| GQF93_RS27660 (81141) | 81141..81215 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| GQF93_RS27665 (81449) | 81449..81706 | - | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| GQF93_RS27670 (81990) | 81990..82139 | - | 150 | WP_106120900.1 | Hok/Gef family protein | Toxin Detail |
| - (82183) | 82183..82244 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (82183) | 82183..82244 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (82183) | 82183..82244 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (82183) | 82183..82244 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|