MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 42449 bp
Accession: NZ_CP059488 Location: 1807777..1850225 Organism: Acidithiobacillus ferrivorans strain XJFY6S-08 Replicon: chromosome
Accession: NZ_CP059488 Location: 1807777..1850225 Organism: Acidithiobacillus ferrivorans strain XJFY6S-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H2515_RS08950 () | 1804004..1804966 | - | 963 | WP_198659886.1 | GTP-binding protein | - |
| H2515_RS08955 () | 1805067..1805588 | - | 522 | WP_198659887.1 | hypothetical protein | - |
| H2515_RS08960 () | 1805604..1805870 | - | 267 | WP_198659888.1 | hypothetical protein | - |
| H2515_RS08965 () | 1805905..1806189 | - | 285 | WP_198659889.1 | integration host factor subunit alpha | - |
| H2515_RS08970 () | 1806308..1806599 | + | 292 | Protein_1759 | DUF167 domain-containing protein | - |
| H2515_RS08975 () | 1806706..1806969 | + | 264 | WP_198659890.1 | superinfection immunity protein | - |
| H2515_RS08980 () | 1807272..1807466 | - | 195 | WP_198659891.1 | hypothetical protein | - |
| H2515_RS08985 () | 1807777..1810173 | - | 2397 | WP_198659892.1 | hypothetical protein | VF |
| H2515_RS08990 () | 1810184..1810801 | - | 618 | WP_198659893.1 | hypothetical protein | VF |
| H2515_RS08995 () | 1810949..1811224 | - | 276 | WP_198659894.1 | hypothetical protein | - |
| H2515_RS09000 () | 1811236..1812543 | - | 1308 | WP_198659895.1 | hypothetical protein | VF |
| H2515_RS09005 () | 1812546..1813562 | - | 1017 | WP_198659896.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| H2515_RS09010 () | 1813564..1814625 | - | 1062 | WP_198659897.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| H2515_RS09015 () | 1814638..1815306 | - | 669 | WP_198659898.1 | type IV secretion system protein | - |
| H2515_RS09020 () | 1815432..1815729 | + | 298 | Protein_1769 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H2515_RS09025 () | 1815735..1816052 | + | 318 | WP_198659899.1 | putative addiction module antidote protein | - |
| H2515_RS09030 () | 1816106..1816582 | - | 477 | WP_077218530.1 | hypothetical protein | - |
| H2515_RS09035 () | 1816575..1818335 | - | 1761 | WP_198661448.1 | P-type conjugative transfer protein TrbL | - |
| H2515_RS09040 () | 1818359..1818619 | - | 261 | WP_198659900.1 | EexN family lipoprotein | - |
| H2515_RS09045 () | 1818638..1819378 | - | 741 | WP_198659901.1 | P-type conjugative transfer protein TrbJ | - |
| H2515_RS09050 () | 1819459..1821966 | - | 2508 | Protein_1775 | conjugal transfer protein TrbE | - |
| H2515_RS09055 () | 1821966..1822343 | - | 378 | WP_198659902.1 | VirB3 family type IV secretion system protein | - |
| H2515_RS09060 () | 1822347..1822733 | - | 387 | WP_198659903.1 | TrbC/VirB2 family protein | - |
| H2515_RS09065 () | 1822837..1823805 | + | 969 | WP_198659904.1 | hypothetical protein | - |
| H2515_RS09070 () | 1823774..1824169 | - | 396 | WP_198659905.1 | hypothetical protein | - |
| H2515_RS09075 () | 1824180..1825151 | - | 972 | WP_198659906.1 | hypothetical protein | VF |
| H2515_RS09080 () | 1825148..1825600 | - | 453 | WP_198659907.1 | hypothetical protein | - |
| H2515_RS09085 () | 1825676..1827226 | - | 1551 | WP_198659908.1 | DUF3363 domain-containing protein | - |
| H2515_RS09090 () | 1827223..1828095 | - | 873 | WP_198659909.1 | hypothetical protein | - |
| H2515_RS09095 () | 1828160..1829107 | - | 948 | WP_198659910.1 | hypothetical protein | - |
| H2515_RS09100 () | 1829219..1829593 | - | 375 | WP_198659911.1 | hypothetical protein | - |
| H2515_RS09105 () | 1829603..1829881 | - | 279 | WP_198659912.1 | hypothetical protein | - |
| H2515_RS09110 () | 1829878..1831071 | - | 1194 | WP_198659913.1 | hypothetical protein | - |
| H2515_RS09115 () | 1831131..1835999 | - | 4869 | WP_198659914.1 | DUF3560 domain-containing protein | - |
| H2515_RS09120 () | 1836153..1836437 | + | 285 | WP_198659915.1 | TIR domain-containing protein | - |
| H2515_RS09125 () | 1836434..1836898 | + | 465 | WP_012535904.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| H2515_RS09130 () | 1836899..1837471 | + | 573 | WP_198659916.1 | PIN domain-containing protein | Toxin Detail |
| H2515_RS09135 () | 1837595..1837753 | + | 159 | WP_198659917.1 | transposase | - |
| H2515_RS09140 () | 1837826..1838266 | - | 441 | WP_198659918.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| H2515_RS09145 () | 1838439..1838708 | + | 270 | WP_198659919.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| H2515_RS09150 () | 1838769..1838969 | + | 201 | WP_198659920.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| H2515_RS09155 () | 1839493..1840590 | + | 1098 | WP_198659921.1 | HNH endonuclease | - |
| H2515_RS09160 () | 1840494..1841738 | - | 1245 | WP_198659922.1 | DNA (cytosine-5-)-methyltransferase | - |
| H2515_RS09165 () | 1842240..1842689 | - | 450 | WP_198659923.1 | single-stranded DNA-binding protein | - |
| H2515_RS09170 () | 1842751..1843641 | - | 891 | WP_198659924.1 | DNA adenine methylase | - |
| H2515_RS09175 () | 1843638..1844837 | - | 1200 | WP_198659925.1 | hypothetical protein | - |
| H2515_RS09180 () | 1844834..1845694 | - | 861 | WP_198659926.1 | ATP-binding protein | - |
| H2515_RS09185 () | 1845705..1846736 | - | 1032 | WP_198659927.1 | DUF1376 domain-containing protein | - |
| H2515_RS09190 () | 1846739..1846894 | - | 156 | WP_198659928.1 | hypothetical protein | - |
| H2515_RS09195 () | 1847009..1847233 | - | 225 | WP_198659929.1 | helix-turn-helix domain-containing protein | - |
| H2515_RS09200 () | 1847443..1848087 | + | 645 | WP_198659930.1 | LexA family transcriptional regulator | - |
| H2515_RS09205 () | 1848398..1848631 | + | 234 | WP_198659931.1 | hypothetical protein | - |
| H2515_RS09210 () | 1848831..1849085 | + | 255 | WP_198659932.1 | hypothetical protein | - |
| H2515_RS09215 () | 1849230..1850225 | + | 996 | WP_198659933.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| H2515_RS09225 () | 1850482..1851135 | + | 654 | WP_035192503.1 | DUF202 domain-containing protein | - |
| H2515_RS09230 () | 1851148..1851594 | - | 447 | WP_143217934.1 | DUF1643 domain-containing protein | - |
| H2515_RS09240 () | 1851982..1852716 | - | 735 | WP_198659934.1 | PspA/IM30 family protein | - |
| H2515_RS09245 () | 1852756..1853580 | - | 825 | WP_014028783.1 | heavy metal-binding domain-containing protein | - |
| H2515_RS09250 () | 1853577..1854554 | - | 978 | WP_014028782.1 | heavy metal-binding domain-containing protein | - |
| H2515_RS09255 () | 1854570..1854950 | - | 381 | WP_065413435.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|