MGE detailed information
MGE type: Prophage MGE length: 77855 bp
Accession: NZ_CP059162 Location: 2245238..2323092 Organism: Pseudomonas chlororaphis subsp. aurantiaca strain YS05 Replicon: chromosome
Accession: NZ_CP059162 Location: 2245238..2323092 Organism: Pseudomonas chlororaphis subsp. aurantiaca strain YS05 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0I86_RS10290 () | 2241445..2242221 | + | 777 | WP_007921969.1 | SDR family oxidoreductase | - |
| H0I86_RS10310 () | 2242981..2244264 | - | 1284 | WP_180924924.1 | FAD-binding oxidoreductase | - |
| H0I86_RS10320 () | 2244659..2245237 | + | 579 | WP_180924925.1 | hypothetical protein | - |
| H0I86_RS10325 () | 2245238..2246377 | - | 1140 | WP_180924926.1 | hypothetical protein ; Integrase | Integrase |
| H0I86_RS10330 () | 2246377..2246610 | - | 234 | WP_039593925.1 | hypothetical protein | - |
| H0I86_RS10335 () | 2246656..2246904 | - | 249 | WP_180924927.1 | hypothetical protein | - |
| H0I86_RS10340 () | 2247099..2247401 | - | 303 | Protein_2028 | hypothetical protein | - |
| H0I86_RS10345 () | 2247908..2248117 | + | 210 | WP_180924928.1 | hypothetical protein | - |
| H0I86_RS10350 () | 2248155..2248385 | + | 231 | WP_096373587.1 | hypothetical protein | - |
| H0I86_RS10355 () | 2248630..2248941 | + | 312 | WP_180924929.1 | hypothetical protein | - |
| H0I86_RS10360 () | 2248968..2249207 | + | 240 | WP_124303182.1 | hypothetical protein | - |
| H0I86_RS10365 () | 2249253..2250281 | - | 1029 | WP_180924930.1 | virulence RhuM family protein | - |
| H0I86_RS10370 () | 2250510..2250983 | + | 474 | WP_180924931.1 | hypothetical protein | - |
| H0I86_RS10375 () | 2251133..2252295 | + | 1163 | WP_180921255.1 | IS3 family transposase ISPsy24 | Transposase |
| H0I86_RS10380 () | 2252288..2252671 | - | 384 | WP_180924932.1 | hypothetical protein | - |
| H0I86_RS10385 () | 2252793..2252873 | + | 81 | WP_180925812.1 | hypothetical protein | - |
| H0I86_RS10390 () | 2253535..2253771 | + | 237 | WP_180924933.1 | hypothetical protein | - |
| H0I86_RS10395 () | 2253829..2254682 | + | 854 | WP_180924934.1 | IS5 family transposase ISPst8 | Transposase |
| H0I86_RS10400 () | 2254649..2255305 | + | 657 | WP_180924935.1 | hypothetical protein | - |
| H0I86_RS10405 () | 2255401..2255838 | - | 438 | WP_180924936.1 | helix-turn-helix domain-containing protein | - |
| H0I86_RS10410 () | 2255984..2256145 | + | 162 | WP_016704884.1 | Arc family DNA-binding protein | - |
| H0I86_RS10415 () | 2256126..2256524 | + | 399 | WP_029527292.1 | DUF3077 domain-containing protein | - |
| H0I86_RS10420 () | 2256521..2257315 | + | 795 | Protein_2044 | phage antirepressor KilAC domain-containing protein | - |
| H0I86_RS10425 () | 2257449..2257793 | + | 345 | WP_062823026.1 | hypothetical protein | Toxin Detail |
| H0I86_RS10430 () | 2257790..2258104 | + | 315 | WP_124304706.1 | transcriptional regulator | Antitoxin Detail |
| H0I86_RS10435 () | 2258158..2258583 | - | 426 | WP_029527289.1 | hypothetical protein | - |
| H0I86_RS10440 () | 2258682..2258927 | + | 246 | WP_180924937.1 | helix-turn-helix domain-containing protein | - |
| H0I86_RS10445 () | 2259052..2259474 | + | 423 | WP_180924938.1 | Rha family transcriptional regulator | - |
| H0I86_RS10450 () | 2259700..2260236 | + | 537 | WP_180924939.1 | hypothetical protein | - |
| H0I86_RS10455 () | 2260233..2260496 | + | 264 | WP_180924940.1 | hypothetical protein | - |
| H0I86_RS10460 () | 2260718..2261479 | + | 762 | WP_180924941.1 | hypothetical protein | - |
| H0I86_RS10465 () | 2261460..2262266 | + | 807 | WP_180924942.1 | IS21 family transposase ISKol1 | Transposase |
| H0I86_RS10470 () | 2262263..2263633 | + | 1371 | WP_180924943.1 | AAA family ATPase | - |
| H0I86_RS10475 () | 2263651..2263920 | + | 270 | WP_180925813.1 | hypothetical protein | - |
| H0I86_RS10480 () | 2263917..2264303 | + | 387 | WP_180924944.1 | antitermination protein Q | - |
| H0I86_RS10485 () | 2264507..2264824 | + | 318 | WP_180924945.1 | FxLYD domain-containing protein | - |
| H0I86_RS10490 () | 2265289..2265609 | + | 321 | WP_180924946.1 | hypothetical protein | - |
| H0I86_RS10495 () | 2265807..2266133 | + | 327 | WP_124304718.1 | phage holin family protein | - |
| H0I86_RS10500 () | 2266133..2266429 | + | 297 | WP_180924947.1 | hypothetical protein | - |
| H0I86_RS10505 () | 2266604..2266741 | - | 138 | WP_180924948.1 | hypothetical protein | - |
| H0I86_RS10510 () | 2266774..2266965 | + | 192 | WP_180924949.1 | hypothetical protein | - |
| H0I86_RS10515 () | 2266996..2267280 | - | 285 | WP_180924950.1 | hypothetical protein | - |
| H0I86_RS10520 () | 2267279..2267902 | + | 624 | WP_180924951.1 | hypothetical protein | - |
| H0I86_RS10525 () | 2267934..2268410 | + | 477 | WP_180924952.1 | DUF2280 domain-containing protein | - |
| H0I86_RS10530 () | 2268385..2269704 | + | 1320 | WP_180924953.1 | terminase | - |
| H0I86_RS10535 () | 2269707..2271086 | + | 1380 | WP_180924954.1 | DUF4055 domain-containing protein | - |
| H0I86_RS10540 () | 2271086..2272162 | + | 1077 | WP_180924955.1 | hypothetical protein | - |
| H0I86_RS10545 () | 2272311..2273054 | + | 744 | WP_180924956.1 | hypothetical protein | - |
| H0I86_RS10550 () | 2273075..2274028 | + | 954 | WP_180924957.1 | hypothetical protein | - |
| H0I86_RS10555 () | 2274071..2274559 | + | 489 | WP_180924958.1 | hypothetical protein | - |
| H0I86_RS10560 () | 2274559..2274930 | + | 372 | WP_180924959.1 | hypothetical protein | - |
| H0I86_RS10565 () | 2274932..2275315 | + | 384 | WP_180924960.1 | hypothetical protein | - |
| H0I86_RS10570 () | 2275336..2275932 | + | 597 | WP_180925814.1 | hypothetical protein | - |
| H0I86_RS10575 () | 2275929..2276345 | + | 417 | WP_180924961.1 | DUF4128 domain-containing protein | - |
| H0I86_RS10580 () | 2276417..2277073 | + | 657 | WP_180924962.1 | phage tail protein | - |
| H0I86_RS10585 () | 2277077..2277457 | + | 381 | WP_009048053.1 | phage tail assembly chaperone | - |
| H0I86_RS10590 () | 2277502..2277774 | + | 273 | WP_180925815.1 | DUF1799 domain-containing protein | - |
| H0I86_RS10595 () | 2277771..2281055 | + | 3285 | WP_180924963.1 | phage tail tape measure protein | - |
| H0I86_RS10600 () | 2281055..2281393 | + | 339 | WP_180924964.1 | phage tail protein | - |
| H0I86_RS10605 () | 2281403..2282152 | + | 750 | WP_180924965.1 | phage minor tail protein L | - |
| H0I86_RS10610 () | 2282155..2282922 | + | 768 | WP_180924966.1 | C40 family peptidase | - |
| H0I86_RS10615 () | 2282919..2283224 | - | 306 | WP_180924967.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| H0I86_RS10620 () | 2283233..2283511 | - | 279 | WP_180925816.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H0I86_RS10625 () | 2283650..2284072 | + | 423 | WP_180924968.1 | hypothetical protein | - |
| H0I86_RS10630 () | 2284125..2284727 | + | 603 | WP_180924969.1 | tail assembly protein | - |
| H0I86_RS10635 () | 2284785..2288243 | + | 3459 | WP_180924970.1 | phage tail protein | - |
| H0I86_RS10640 () | 2288252..2288563 | + | 312 | WP_180925817.1 | hypothetical protein | - |
| H0I86_RS10645 () | 2288563..2289243 | + | 681 | WP_180924971.1 | hypothetical protein | - |
| H0I86_RS10650 () | 2289307..2290065 | + | 759 | WP_180924972.1 | phage tail protein | - |
| H0I86_RS10655 () | 2290065..2290778 | + | 714 | WP_180924973.1 | hypothetical protein | - |
| H0I86_RS10660 () | 2290838..2291263 | + | 426 | WP_180924974.1 | structural protein | - |
| H0I86_RS10665 () | 2291260..2291790 | + | 531 | WP_180924975.1 | lysis system i-spanin subunit Rz | - |
| H0I86_RS10670 () | 2291768..2292007 | - | 240 | WP_028682510.1 | hypothetical protein | - |
| H0I86_RS10675 () | 2292058..2292765 | - | 708 | WP_180925818.1 | SOS response-associated peptidase | - |
| H0I86_RS10680 () | 2292895..2293191 | + | 297 | WP_180925819.1 | hypothetical protein | - |
| H0I86_RS10690 () | 2293928..2294350 | + | 423 | WP_180924976.1 | DUF3757 domain-containing protein | - |
| H0I86_RS10695 () | 2294552..2294914 | + | 363 | WP_180924977.1 | NUDIX domain-containing protein | - |
| H0I86_RS10700 () | 2295071..2295421 | + | 351 | WP_180925820.1 | hypothetical protein | - |
| H0I86_RS10705 () | 2295746..2296375 | + | 630 | WP_180924978.1 | lytic polysaccharide monooxygenase | - |
| H0I86_RS10710 () | 2296422..2297546 | + | 1125 | Protein_2101 | chitinase | - |
| H0I86_RS10715 () | 2297682..2298143 | + | 462 | WP_180924979.1 | DUF2214 family protein | - |
| H0I86_RS10720 () | 2298218..2298466 | - | 249 | WP_009048117.1 | hypothetical protein | - |
| H0I86_RS10725 () | 2298813..2299007 | - | 195 | WP_007920550.1 | carbon storage regulator CsrA | - |
| H0I86_RS10730 () | 2299275..2299631 | + | 357 | WP_180925821.1 | SPOR domain-containing protein | - |
| H0I86_RS10735 () | 2299750..2300439 | - | 690 | WP_180924980.1 | endonuclease I family protein | - |
| H0I86_RS10740 () | 2300444..2300686 | - | 243 | WP_180924981.1 | DUF1654 domain-containing protein | - |
| H0I86_RS10745 () | 2300921..2302009 | - | 1089 | WP_062823040.1 | asparaginase | - |
| H0I86_RS10750 () | 2302333..2302788 | + | 456 | WP_180924982.1 | hypothetical protein | - |
| H0I86_RS10755 () | 2303036..2303992 | + | 957 | WP_009043052.1 | sugar ABC transporter substrate-binding protein | - |
| H0I86_RS10760 () | 2304050..2305603 | + | 1554 | WP_180924983.1 | hypothetical protein | VF |
| H0I86_RS10765 () | 2305600..2306577 | + | 978 | WP_007920531.1 | ABC transporter permease | - |
| H0I86_RS10770 () | 2306581..2307600 | + | 1020 | WP_016704898.1 | LacI family transcriptional regulator | - |
| H0I86_RS10775 () | 2307623..2308540 | + | 918 | WP_180924984.1 | ribokinase | - |
| H0I86_RS10780 () | 2308537..2308941 | + | 405 | WP_180924985.1 | D-ribose pyranase | - |
| H0I86_RS10785 () | 2308982..2310010 | + | 1029 | WP_180924986.1 | nucleoside hydrolase | - |
| H0I86_RS10790 () | 2310045..2310257 | - | 213 | WP_009043057.1 | hypothetical protein | - |
| H0I86_RS10795 () | 2310421..2310726 | + | 306 | WP_180924987.1 | hypothetical protein | - |
| H0I86_RS10800 () | 2310887..2311198 | + | 312 | WP_180924988.1 | hypothetical protein | - |
| H0I86_RS10805 () | 2311271..2311483 | - | 213 | WP_003179963.1 | cold-shock protein | - |
| H0I86_RS10810 () | 2311777..2312076 | - | 300 | WP_009043058.1 | hypothetical protein | - |
| H0I86_RS10815 () | 2312462..2314384 | + | 1923 | WP_009048132.1 | threonine--tRNA ligase | - |
| H0I86_RS10820 () | 2314384..2314935 | + | 552 | WP_169914426.1 | translation initiation factor IF-3 | - |
| H0I86_RS10825 () | 2314996..2315190 | + | 195 | WP_002553160.1 | 50S ribosomal protein L35 | - |
| H0I86_RS10830 () | 2315221..2315577 | + | 357 | WP_007905879.1 | 50S ribosomal protein L20 | - |
| H0I86_RS10835 () | 2315687..2316703 | + | 1017 | WP_007920512.1 | phenylalanine--tRNA ligase subunit alpha | - |
| H0I86_RS10840 () | 2316738..2319116 | + | 2379 | WP_180924989.1 | phenylalanine--tRNA ligase subunit beta | - |
| H0I86_RS10845 () | 2319120..2319422 | + | 303 | WP_002553164.1 | integration host factor subunit alpha | - |
| H0I86_RS10850 () | 2319403..2319759 | + | 357 | WP_007920509.1 | MerR family transcriptional regulator | - |
| H0I86_RS10860 () | 2320004..2320447 | - | 444 | Protein_2130 | phage integrase Arm DNA-binding domain-containing protein | - |
| H0I86_RS10865 () | 2320647..2321015 | + | 369 | WP_180925822.1 | hypothetical protein | - |
| H0I86_RS10870 () | 2321106..2321315 | + | 210 | WP_180924990.1 | hypothetical protein | - |
| H0I86_RS10880 () | 2323484..2323780 | + | 297 | WP_180924992.1 | hypothetical protein | - |
| H0I86_RS10885 () | 2324168..2324668 | + | 501 | WP_180925823.1 | GNAT family N-acetyltransferase | - |
| H0I86_RS10890 () | 2324987..2326795 | - | 1809 | WP_180924993.1 | calcium-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|