NZ_CP0591311..167739

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 167739 bp
Accession: NZ_CP059131        Location: 1..167739         Organism: Escherichia coli strain Ec55       Replicon: plasmid pEc55_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
H0X92_RS25470 (1) 1..978 + 978 WP_033550836.1 RepB family plasmid replication initiator protein -
H0X92_RS25475 (1263) 1263..2003 - 741 WP_033550837.1 tyrosine-type recombinase/integrase -
H0X92_RS25480 (2124) 2124..2312 - 189 WP_001309252.1 hypothetical protein -
H0X92_RS25485 (2679) 2679..3848 + 1170 WP_001072358.1 hypothetical protein -
H0X92_RS25490 (4074) 4074..4249 - 176 Protein_4 IS3 family transposase -
H0X92_RS25495 (4695) 4695..4967 - 273 WP_001322642.1 hypothetical protein VF
H0X92_RS25500 (5504) 5504..5928 - 425 Protein_6 IS3 family transposase IS2 Transposase
H0X92_RS25505 (6210) 6210..8180 + 1971 WP_001298664.1 Vitamin B12 transporter BtuB VF
H0X92_RS25510 (8187) 8187..8978 + 792 WP_000977394.1 DUF4198 domain-containing protein -
H0X92_RS25515 (9041) 9041..9337 - 297 Protein_9 IS66 family transposase ISEc22 Transposase
H0X92_RS25520 (9367) 9367..10980 - 1614 WP_000080195.1 IS66 family transposase ISEc23 Transposase
H0X92_RS25525 (11011) 11011..11361 - 351 WP_000624722.1 IS66 family transposase ISEc23 Transposase
H0X92_RS25530 (11358) 11358..11783 - 426 WP_000422741.1 IS66 family transposase ISEc23 Transposase
H0X92_RS25535 (11869) 11869..12189 - 321 Protein_13 IS66 family transposase ISEc22 Transposase
H0X92_RS25540 (12257) 12257..13039 - 783 WP_001300609.1 IS21 family transposase IS100kyp Transposase
H0X92_RS25545 (13036) 13036..14058 - 1023 WP_001310017.1 IS21 family transposase IS100kyp Transposase
H0X92_RS25550 (14144) 14144..15089 - 946 Protein_16 IS66 family transposase ISEc8 Transposase
H0X92_RS25555 (15138) 15138..15485 - 348 WP_000612626.1 IS66 family transposase ISKpn24 Transposase
H0X92_RS25560 (15482) 15482..15886 - 405 WP_000839179.1 IS66 family transposase ISEc22 Transposase
H0X92_RS25565 (15966) 15966..16304 - 339 Protein_19 IS3 family transposase IS629 Transposase
H0X92_RS25570 (16388) 16388..17896 - 1509 WP_001189113.1 group II intron reverse transcriptase/maturase -
H0X92_RS25575 (18569) 18569..19308 - 740 Protein_21 IS3 family transposase IS629 Transposase
H0X92_RS25580 (19334) 19334..19639 + 306 Protein_22 IS91 family transposase ISSbo1 Transposase
H0X92_RS25585 (20162) 20162..21337 - 1176 WP_001020413.1 hypothetical protein VF
H0X92_RS25590 (21406) 21406..23667 - 2262 WP_001100763.1 TonB-dependent receptor -
H0X92_RS25595 (23836) 23836..24612 - 777 WP_000981091.1 energy transducer TonB -
H0X92_RS25600 (24620) 24620..25495 - 876 WP_001224623.1 ChaN family lipoprotein -
H0X92_RS25605 (25869) 25869..26494 - 626 Protein_27 replication initiation protein -
H0X92_RS25610 (27946) 27946..28281 - 336 WP_001080732.1 colicin E1 family microcin immunity protein -
H0X92_RS25615 (28410) 28410..28757 + 348 WP_000142452.1 DUF6404 family protein -
H0X92_RS25620 (28777) 28777..29286 - 510 WP_000194542.1 hypothetical protein -
H0X92_RS25625 (29283) 29283..29543 - 261 WP_000371882.1 hypothetical protein -
H0X92_RS25630 (29645) 29645..30384 + 740 Protein_32 IS3 family transposase IS629 Transposase
H0X92_RS25635 (31057) 31057..31371 + 315 Protein_33 IS5 family transposase ISKpn26 Transposase
H0X92_RS25640 (31372) 31372..31545 + 174 Protein_34 IS5 family transposase ISKpn26 Transposase
H0X92_RS25645 (31695) 31695..32328 - 634 Protein_35 histidine-type phosphatase -
H0X92_RS25650 (32450) 32450..32935 - 486 WP_000874189.1 hypothetical protein -
H0X92_RS25655 (32960) 32960..33445 - 486 WP_001267176.1 TlpA disulfide reductase family protein -
H0X92_RS25660 (33432) 33432..34127 - 696 WP_000117262.1 Vitamin B12 import ATP-binding protein BtuD VF
H0X92_RS25665 (34132) 34132..35262 - 1131 WP_000729218.1 ABC transporter permease -
H0X92_RS25670 (35252) 35252..36535 - 1284 WP_000964653.1 ABC transporter permease -
H0X92_RS25675 (36538) 36538..37917 - 1380 WP_000119836.1 Fe-S-containing protein -
H0X92_RS25680 (38021) 38021..38548 - 528 WP_000178050.1 iron transporter -
H0X92_RS25685 (38589) 38589..40475 - 1887 WP_000118029.1 FTR1 family protein -
H0X92_RS25690 (40822) 40822..41583 - 762 WP_001225378.1 Na(+)-translocating NADH-quinone reductase subunit C -
H0X92_RS25695 (41820) 41820..42326 - 507 WP_000949452.1 protein disulfide oxidoreductase -
H0X92_RS25700 (42316) 42316..42486 - 171 Protein_46 DsbA family protein -
H0X92_RS25705 (42624) 42624..42737 - 114 Protein_47 IS6 family transposase -
H0X92_RS25710 (42937) 42937..43634 + 698 WP_151884388.1 IS1 family transposase IS1R Transposase
H0X92_RS25715 (43649) 43649..43867 + 219 Protein_49 IS4 family transposase -
H0X92_RS25720 (43917) 43917..44621 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
H0X92_RS25725 (44686) 44686..45231 - 546 Protein_51 IS91 family transposase ISAzo26 Transposase
H0X92_RS25730 (45389) 45389..45862 + 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
H0X92_RS25735 (45993) 45993..46781 + 789 WP_202745722.1 hypothetical protein ARG
H0X92_RS25740 (46987) 46987..47334 + 348 WP_000679427.1 Spermidine export protein MdtJ ARG
H0X92_RS25745 (47328) 47328..48167 + 840 WP_000259031.1 hypothetical protein ARG
H0X92_RS25750 (48295) 48295..48498 + 204 WP_000376616.1 hypothetical protein -
H0X92_RS25755 (48654) 48654..49859 + 1206 WP_000184001.1 chromate efflux transporter -
H0X92_RS25760 (49870) 49870..50175 + 306 WP_000130000.1 hypothetical protein Relaxase
H0X92_RS25765 (50219) 50219..50284 + 66 Protein_59 EAL domain-containing protein -
H0X92_RS25770 (50402) 50402..51166 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
H0X92_RS25775 (51659) 51659..52243 - 585 WP_001137892.1 macrolide-binding transcriptional repressor MphR(A) -
H0X92_RS25780 (52243) 52243..53481 - 1239 WP_000004159.1 macrolide resistance MFS transporter Mrx(A) -
H0X92_RS25785 (53478) 53478..54383 - 906 WP_000219391.1 hypothetical protein ARG
H0X92_RS25790 (54505) 54505..55209 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
H0X92_RS25795 (55270) 55270..55566 + 297 Protein_65 replication protein C, IncQ-type -
H0X92_RS25800 (55754) 55754..56569 + 816 WP_001043260.1 hypothetical protein ARG
H0X92_RS25805 (56630) 56630..57433 + 804 WP_001082319.1 hypothetical protein ARG
H0X92_RS25810 (57433) 57433..58269 + 837 WP_000480972.1 hypothetical protein ARG
H0X92_RS25815 (58323) 58323..58559 + 237 WP_042005022.1 hypothetical protein -
H0X92_RS25820 (58591) 58591..59217 - 627 WP_031606906.1 tetracycline resistance transcriptional repressor TetR(A) -
H0X92_RS25825 (59323) 59323..60522 + 1200 WP_000804064.1 Multidrug resistance protein MdtG ARG
H0X92_RS25830 (60554) 60554..61414 - 861 WP_000493383.1 EamA family transporter -
H0X92_RS25835 (61423) 61423..61761 - 339 Protein_73 transposase family protein -
H0X92_RS25840 (61816) 61816..62520 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
H0X92_RS25845 (62585) 62585..63848 - 1264 Protein_75 IS1182 family transposase ISCfr1 Transposase
H0X92_RS25850 (63963) 63963..65099 - 1137 WP_000080860.1 DUF3883 domain-containing protein -
H0X92_RS26770 (65150) 65150..65251 - 102 Protein_77 hypothetical protein -
H0X92_RS25855 (65317) 65317..66021 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
H0X92_RS25860 (66165) 66165..66719 + 555 WP_063840321.1 hypothetical protein ARG
H0X92_RS25865 (66850) 66850..67680 + 831 WP_001334766.1 hypothetical protein ARG
H0X92_RS25870 (67818) 67818..68258 + 441 Protein_81 CatB-related O-acetyltransferase -
H0X92_RS25875 (68312) 68312..69016 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
H0X92_RS25880 (69093) 69093..71312 - 2220 Protein_83 Tn3 family transposase TnpA_Tn3 Transposase
H0X92_RS25885 (71377) 71377..71670 + 294 WP_116961751.1 WbuC family cupin fold metalloprotein -
H0X92_RS25890 (71717) 71717..72592 - 876 WP_000239590.1 hypothetical protein ARG
H0X92_RS25895 (72848) 72848..74110 - 1263 WP_000608644.1 IS1380 family transposase ISEcp1 Transposase
H0X92_RS25900 (74292) 74292..74510 - 219 WP_001143771.1 Tn3 family transposase TnpA_Tn3 Transposase
H0X92_RS25905 (74674) 74674..75000 + 327 Protein_88 Tn3 family transposase TnpR_Tn3 Transposase
H0X92_RS25910 (75052) 75052..75756 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
H0X92_RS25915 (75820) 75820..76266 + 447 Protein_90 tunicamycin resistance protein -
H0X92_RS25920 (76748) 76748..76939 - 192 WP_000951934.1 hypothetical protein -
H0X92_RS26775 (76963) 76963..77094 + 132 Protein_92 hypothetical protein -
H0X92_RS25925 (77147) 77147..77851 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
H0X92_RS25930 (77917) 77917..79431 + 1515 Protein_94 Tn3 family transposase TnpA_TnAs1 Transposase
H0X92_RS25935 (79473) 79473..79715 + 243 WP_032140899.1 hypothetical protein -
H0X92_RS25940 (79747) 79747..80373 - 627 WP_031606906.1 tetracycline resistance transcriptional repressor TetR(A) -
H0X92_RS25945 (80479) 80479..81678 + 1200 WP_000804064.1 Multidrug resistance protein MdtG ARG
H0X92_RS25950 (81710) 81710..82594 - 885 WP_000058717.1 EamA family transporter -
H0X92_RS25955 (82732) 82732..83124 - 393 WP_001351729.1 isochorismatase family cysteine hydrolase -
H0X92_RS25960 (83128) 83128..83877 + 750 Protein_100 Tn3 family transposase TnpA_TnAs1 Transposase
H0X92_RS25965 (83901) 83901..84506 - 606 WP_000509965.1 Tn3 family transposase TnpR_Tn5403 Transposase
H0X92_RS25970 (84601) 84601..87498 + 2898 WP_001553819.1 Tn3 family transposase TnpA_Tn5403 Transposase
H0X92_RS25975 (87635) 87635..88036 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
H0X92_RS25980 (87969) 87969..88226 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
H0X92_RS25985 (88319) 88319..88972 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
H0X92_RS25990 (89070) 89070..89210 - 141 WP_001333237.1 hypothetical protein -
H0X92_RS25995 (89912) 89912..90769 - 858 WP_000130640.1 incFII family plasmid replication initiator RepA -
H0X92_RS26000 (90762) 90762..90836 - 75 WP_031943482.1 RepA leader peptide Tap -
H0X92_RS26005 (90836) 90836..90967 - 132 Protein_109 protein CopA/IncA -
H0X92_RS26010 (91073) 91073..91288 - 216 Protein_110 replication regulatory protein RepA -
H0X92_RS26015 (91479) 91479..93020 + 1542 WP_001298859.1 IS21 family transposase ISEc12 Transposase
H0X92_RS26020 (93035) 93035..93781 + 747 WP_001016257.1 IS21 family transposase ISEc12 Transposase
H0X92_RS26030 (94210) 94210..94344 - 135 WP_023144756.1 Hok/Gef family protein Toxin Detail
- (94389) 94389..94449 + 61 NuclAT_2 - Antitoxin Detail
- (94389) 94389..94449 + 61 NuclAT_2 - Antitoxin Detail
- (94389) 94389..94449 + 61 NuclAT_2 - Antitoxin Detail
- (94389) 94389..94449 + 61 NuclAT_2 - Antitoxin Detail
H0X92_RS26035 (94416) 94416..94702 - 287 Protein_114 DUF2726 domain-containing protein -
H0X92_RS26040 (95215) 95215..95427 - 213 WP_013023861.1 hypothetical protein -
H0X92_RS26045 (95558) 95558..96118 - 561 WP_000139341.1 fertility inhibition protein FinO -
H0X92_RS26050 (96173) 96173..96919 - 747 WP_000205718.1 conjugal transfer pilus acetylase TraX -
H0X92_RS26055 (96939) 96939..102209 - 5271 WP_042045338.1 Multifunctional conjugation protein TraI Relaxase
H0X92_RS26060 (102209) 102209..104398 - 2190 WP_024946705.1 type IV conjugative transfer system coupling protein TraD -
H0X92_RS26065 (104395) 104395..105174 - 780 WP_000199914.1 hypothetical protein -
H0X92_RS26070 (105377) 105377..106087 - 711 WP_064754955.1 conjugal transfer complement resistance protein TraT -
H0X92_RS26075 (106140) 106140..106637 - 498 WP_000605862.1 entry exclusion protein -
H0X92_RS26080 (106656) 106656..109475 - 2820 WP_001007062.1 conjugal transfer mating-pair stabilization protein TraG -
H0X92_RS26085 (109472) 109472..110845 - 1374 WP_000944328.1 conjugal transfer pilus assembly protein TraH -
H0X92_RS26090 (110832) 110832..111224 - 393 WP_000659962.1 F-type conjugal transfer protein TrbF -
H0X92_RS26095 (111205) 111205..111552 - 348 WP_071571857.1 P-type conjugative transfer protein TrbJ -
H0X92_RS26100 (111482) 111482..112027 - 546 WP_000059829.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
H0X92_RS26105 (112014) 112014..112298 - 285 WP_001617873.1 type-F conjugative transfer system pilin chaperone TraQ -
H0X92_RS26110 (112425) 112425..112745 - 321 WP_001348757.1 conjugal transfer protein TrbA -
H0X92_RS26120 (113645) 113645..114625 - 981 WP_000019450.1 IS5 family transposase ISKpn26 Transposase
H0X92_RS26125 (114755) 114755..115498 - 744 WP_001030401.1 type-F conjugative transfer system pilin assembly protein TraF -
H0X92_RS26130 (115491) 115491..115748 - 258 WP_000864347.1 conjugal transfer protein TrbE -
H0X92_RS26135 (115775) 115775..117625 - 1851 WP_202746773.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
H0X92_RS26140 (117622) 117622..118260 - 639 WP_001080259.1 type-F conjugative transfer system pilin assembly protein TrbC -
H0X92_RS26145 (118269) 118269..118574 - 306 WP_000224413.1 hypothetical protein -
H0X92_RS26150 (118604) 118604..119596 - 993 WP_000830190.1 conjugal transfer pilus assembly protein TraU -
H0X92_RS26155 (119593) 119593..120225 - 633 WP_001203727.1 type-F conjugative transfer system protein TraW -
H0X92_RS26160 (120222) 120222..120608 - 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
H0X92_RS26165 (120605) 120605..123232 - 2628 WP_001064258.1 type IV secretion system protein TraC -
H0X92_RS26170 (123392) 123392..123613 - 222 WP_001278694.1 conjugal transfer protein TraR -
H0X92_RS26175 (123748) 123748..124263 - 516 WP_000809886.1 type IV conjugative transfer system lipoprotein TraV -
H0X92_RS26180 (124263) 124263..124574 - 312 WP_001057272.1 conjugal transfer protein TrbD -
H0X92_RS26185 (124561) 124561..125127 - 567 WP_000896601.1 conjugal transfer pilus-stabilizing protein TraP -
H0X92_RS26190 (125117) 125117..126568 - 1452 WP_000146687.1 F-type conjugal transfer pilus assembly protein TraB -
H0X92_RS26195 (126568) 126568..127296 - 729 WP_001230808.1 type-F conjugative transfer system secretin TraK -
H0X92_RS26200 (127283) 127283..127849 - 567 WP_000399791.1 type IV conjugative transfer system protein TraE -
H0X92_RS26205 (127871) 127871..128182 - 312 WP_000012107.1 type IV conjugative transfer system protein TraL -
H0X92_RS26210 (128197) 128197..128556 - 360 WP_024210418.1 type IV conjugative transfer system pilin TraA -
H0X92_RS26215 (128590) 128590..128817 - 228 WP_001254388.1 conjugal transfer relaxosome protein TraY -
H0X92_RS26220 (128905) 128905..129582 - 678 WP_001348626.1 PAS domain-containing protein -
H0X92_RS26225 (129716) 129716..130099 - 384 WP_001151566.1 conjugal transfer relaxosome DNA-binding protein TraM -
H0X92_RS26230 (130429) 130429..131031 + 603 WP_000243712.1 hypothetical protein VF
H0X92_RS26235 (131328) 131328..132149 - 822 WP_001234469.1 DUF932 domain-containing protein -
H0X92_RS26240 (132268) 132268..132555 - 288 WP_000107535.1 hypothetical protein -
H0X92_RS26245 (132580) 132580..132786 - 207 WP_000275859.1 hypothetical protein -
H0X92_RS26780 (132856) 132856..133029 + 174 Protein_157 hypothetical protein -
H0X92_RS26785 (133027) 133027..133257 - 231 WP_001426396.1 hypothetical protein -
H0X92_RS26255 (133477) 133477..133602 - 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
H0X92_RS26790 (133544) 133544..133693 - 150 Protein_160 plasmid maintenance protein Mok -
- (133679) 133679..133806 - 128 NuclAT_0 - Antitoxin Detail
- (133679) 133679..133806 - 128 NuclAT_0 - Antitoxin Detail
- (133679) 133679..133806 - 128 NuclAT_0 - Antitoxin Detail
- (133679) 133679..133806 - 128 NuclAT_0 - Antitoxin Detail
- (135248) 135248..135350 - 103 NuclAT_1 - -
- (135248) 135248..135350 - 103 NuclAT_1 - -
- (135248) 135248..135350 - 103 NuclAT_1 - -
- (135248) 135248..135350 - 103 NuclAT_1 - -
H0X92_RS26265 (135319) 135319..136081 - 763 Protein_162 plasmid SOS inhibition protein A -
H0X92_RS26270 (136078) 136078..136512 - 435 WP_000845949.1 conjugation system SOS inhibitor PsiB -
H0X92_RS26275 (136567) 136567..138525 - 1959 WP_042045562.1 ParB/RepB/Spo0J family partition protein -
H0X92_RS26280 (138591) 138591..138824 - 234 WP_000005990.1 DUF905 family protein -
H0X92_RS26285 (138887) 138887..139384 - 498 WP_042045560.1 single-stranded DNA-binding protein -
H0X92_RS26290 (139534) 139534..141435 - 1902 WP_000936285.1 group II intron reverse transcriptase/maturase -
H0X92_RS26795 (142113) 142113..142319 - 207 WP_000547975.1 hypothetical protein -
H0X92_RS26295 (142232) 142232..142567 - 336 WP_013023883.1 hypothetical protein -
H0X92_RS26800 (142560) 142560..142811 - 252 WP_071579736.1 hypothetical protein -
H0X92_RS26300 (142730) 142730..142936 - 207 WP_001774176.1 hypothetical protein -
H0X92_RS26305 (142962) 142962..143525 - 564 WP_001348621.1 class I SAM-dependent methyltransferase -
H0X92_RS26310 (143573) 143573..144934 - 1362 WP_000170714.1 DUF3560 domain-containing protein -
H0X92_RS26315 (144986) 144986..145216 - 231 WP_000218642.1 hypothetical protein -
H0X92_RS26320 (146251) 146251..146442 - 192 WP_001027516.1 hypothetical protein -
H0X92_RS26325 (146439) 146439..146861 - 423 WP_000271753.1 DUF1380 family protein -
H0X92_RS26330 (146908) 146908..147333 - 426 WP_001198928.1 antirestriction protein -
H0X92_RS26335 (147910) 147910..149022 - 1113 WP_001300563.1 IS4 family transposase IS421 Transposase
H0X92_RS26340 (149099) 149099..149875 - 777 WP_001753849.1 hypothetical protein -
H0X92_RS26345 (149926) 149926..150444 - 519 WP_123325260.1 DUF1380 family protein -
H0X92_RS26350 (150374) 150374..150595 - 222 WP_001104873.1 hypothetical protein -
H0X92_RS26355 (150596) 150596..151279 - 684 WP_000086185.1 DNA methylase -
H0X92_RS26360 (151356) 151356..151667 - 312 WP_042045883.1 hypothetical protein -
H0X92_RS26365 (151664) 151664..152566 - 903 WP_077727434.1 DUF1281 domain-containing protein -
H0X92_RS26370 (153433) 153433..154404 - 972 WP_000817036.1 ParB/RepB/Spo0J family plasmid partition protein -
H0X92_RS26375 (154404) 154404..155570 - 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
H0X92_RS26380 (156158) 156158..156913 - 756 WP_000852146.1 replication initiation protein RepE -
H0X92_RS26385 (157687) 157687..158493 - 807 WP_000016982.1 site-specific integrase -
H0X92_RS26390 (158494) 158494..158799 - 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
H0X92_RS26395 (158801) 158801..159019 - 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
H0X92_RS26400 (159599) 159599..160687 + 1089 WP_000952217.1 transcriptional repressor PifC -
H0X92_RS26405 (160689) 160689..162914 + 2226 WP_000698737.1 P-loop NTPase fold protein -
H0X92_RS26410 (162964) 162964..163863 - 900 WP_000963206.1 nucleotide-binding protein -
H0X92_RS26415 (163853) 163853..164143 - 291 WP_000538310.1 hypothetical protein -
H0X92_RS26420 (166259) 166259..166900 + 642 WP_033550835.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance