MGE detailed information
MGE type: Genomic_island MGE length: 68227 bp
Accession: NZ_CP059119 Location: 3806774..3875000 Organism: Escherichia coli strain Ec42 Replicon: chromosome
Accession: NZ_CP059119 Location: 3806774..3875000 Organism: Escherichia coli strain Ec42 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0X94_RS18415 (3802174) | 3802174..3803388 | + | 1215 | WP_001293044.1 | restriction endonuclease subunit S | - |
| H0X94_RS18420 (3803510) | 3803510..3806626 | + | 3117 | WP_000149676.1 | HsdR family type I site-specific deoxyribonuclease | - |
| H0X94_RS18425 (3806774) | 3806774..3807676 | - | 903 | Protein_3623 | IS5 family transposase ISKpn26 | Transposase |
| H0X94_RS18430 (3807677) | 3807677..3808529 | + | 853 | Protein_3624 | SAM-dependent methyltransferase | - |
| H0X94_RS18435 (3808519) | 3808519..3808857 | + | 339 | WP_000090302.1 | hypothetical protein | - |
| H0X94_RS18440 (3808806) | 3808806..3809228 | + | 423 | Protein_3626 | IS3 family transposase ISLad1 | Transposase |
| H0X94_RS18445 (3809253) | 3809253..3810704 | + | 1452 | WP_000443938.1 | DUF262 domain-containing protein | - |
| H0X94_RS18450 (3810697) | 3810697..3812739 | + | 2043 | WP_000995975.1 | DUF262 domain-containing protein | - |
| H0X94_RS18455 (3812926) | 3812926..3818661 | + | 5736 | WP_000108720.1 | DUF4011 domain-containing protein | - |
| H0X94_RS18460 (3818882) | 3818882..3819340 | - | 459 | Protein_3630 | IS3 family transposase ISEc14 | Transposase |
| H0X94_RS18465 (3819421) | 3819421..3820883 | - | 1463 | Protein_3631 | reverse transcriptase domain-containing protein | - |
| H0X94_RS18470 (3821556) | 3821556..3822295 | - | 740 | Protein_3632 | IS3 family transposase IS629 | Transposase |
| H0X94_RS18480 (3822546) | 3822546..3823061 | - | 516 | WP_000523728.1 | PTS glucose transporter subunit IIA | - |
| H0X94_RS18485 (3823125) | 3823125..3824555 | - | 1431 | WP_000813683.1 | glycoside hydrolase family 32 protein | - |
| H0X94_RS18490 (3824552) | 3824552..3825829 | - | 1278 | WP_001099191.1 | MFS transporter | - |
| H0X94_RS18495 (3825884) | 3825884..3828010 | - | 2127 | WP_000433621.1 | alpha-galactosidase | - |
| H0X94_RS18500 (3828104) | 3828104..3829114 | - | 1011 | WP_000053329.1 | substrate-binding domain-containing protein | - |
| H0X94_RS18505 (3829487) | 3829487..3829653 | - | 167 | Protein_3638 | transposase domain-containing protein | - |
| H0X94_RS18510 (3829767) | 3829767..3830057 | - | 291 | WP_024198648.1 | hypothetical protein | - |
| H0X94_RS18515 (3830361) | 3830361..3830900 | - | 540 | Protein_3640 | inovirus Gp2 family protein | - |
| H0X94_RS18520 (3830950) | 3830950..3831647 | + | 698 | WP_223369285.1 | IS1 family transposase IS1A | Transposase |
| H0X94_RS18525 (3831757) | 3831757..3832595 | - | 839 | Protein_3642 | Streptomycin 3''-adenylyltransferase | ARG |
| H0X94_RS18530 (3832708) | 3832708..3833538 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| H0X94_RS18535 (3833748) | 3833748..3834761 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| H0X94_RS18540 (3834964) | 3834964..3835314 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| H0X94_RS18545 (3835440) | 3835440..3836000 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| H0X94_RS18550 (3836003) | 3836003..3838969 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| H0X94_RS18555 (3839048) | 3839048..3840052 | + | 1005 | WP_021546935.1 | IS110 family transposase IS4321R | Transposase |
| H0X94_RS18560 (3840363) | 3840363..3840740 | + | 378 | WP_000656305.1 | GNAT family N-acetyltransferase | - |
| H0X94_RS18565 (3840941) | 3840941..3841600 | - | 660 | WP_000412211.1 | Chloramphenicol acetyltransferase | ARG |
| H0X94_RS18570 (3841879) | 3841879..3842576 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| H0X94_RS18575 (3842693) | 3842693..3843018 | - | 326 | Protein_3652 | DEAD/DEAH box helicase | - |
| H0X94_RS18580 (3843158) | 3843158..3843721 | - | 564 | WP_000282095.1 | inovirus-type Gp2 protein | - |
| H0X94_RS18585 (3844687) | 3844687..3846119 | - | 1433 | Protein_3654 | YfjI family protein | - |
| H0X94_RS18590 (3846371) | 3846371..3846595 | - | 225 | Protein_3655 | YfjI family protein | - |
| H0X94_RS18595 (3846701) | 3846701..3846928 | - | 228 | WP_000266638.1 | AlpA family phage regulatory protein | - |
| H0X94_RS18600 (3847619) | 3847619..3849250 | + | 1632 | WP_070749884.1 | hypothetical protein | - |
| H0X94_RS18605 (3849343) | 3849343..3849938 | - | 596 | Protein_3658 | hypothetical protein | - |
| H0X94_RS18615 (3850439) | 3850439..3851692 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| H0X94_RS18620 (3851704) | 3851704..3852807 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| H0X94_RS18625 (3853095) | 3853095..3854150 | + | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| H0X94_RS18630 (3854189) | 3854189..3854590 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3855308) | 3855308..3855388 | - | 81 | NuclAT_13 | - | - |
| - (3855308) | 3855308..3855388 | - | 81 | NuclAT_13 | - | - |
| - (3855308) | 3855308..3855388 | - | 81 | NuclAT_13 | - | - |
| - (3855308) | 3855308..3855388 | - | 81 | NuclAT_13 | - | - |
| H0X94_RS18635 (3854648) | 3854648..3855892 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| H0X94_RS18640 (3855984) | 3855984..3856442 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| H0X94_RS18645 (3856703) | 3856703..3858160 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| H0X94_RS18650 (3858217) | 3858217..3858738 | - | 522 | Protein_3666 | peptide chain release factor H | - |
| H0X94_RS18655 (3858734) | 3858734..3858940 | - | 207 | Protein_3667 | RtcB family protein | - |
| H0X94_RS18660 (3859258) | 3859258..3859710 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| H0X94_RS18665 (3859720) | 3859720..3860118 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| H0X94_RS18670 (3860121) | 3860121..3860414 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| H0X94_RS18675 (3860466) | 3860466..3861521 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| H0X94_RS18680 (3861592) | 3861592..3862377 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| H0X94_RS18685 (3862349) | 3862349..3864061 | + | 1713 | Protein_3673 | Flagellar biosynthesis protein FlhA | VF |
| H0X94_RS18690 (3864285) | 3864285..3864782 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| H0X94_RS18695 (3864958) | 3864958..3865707 | - | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| H0X94_RS18700 (3865917) | 3865917..3866177 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| H0X94_RS18705 (3866180) | 3866180..3866458 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| H0X94_RS18710 (3866614) | 3866614..3867354 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| H0X94_RS18715 (3867325) | 3867325..3868092 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| H0X94_RS18720 (3868298) | 3868298..3868876 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| H0X94_RS18725 (3869116) | 3869116..3871560 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| H0X94_RS18730 (3871603) | 3871603..3872049 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| H0X94_RS18735 (3872230) | 3872230..3873000 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| H0X94_RS18740 (3873041) | 3873041..3874177 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| H0X94_RS18745 (3874608) | 3874608..3875000 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| H0X94_RS18750 (3874978) | 3874978..3879210 | - | 4233 | WP_000508724.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|