MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 54501 bp
Accession: NZ_CP059054 Location: 1..54501 Organism: Pseudomonas putida strain BS3701 Replicon: plasmid pBS1142
Accession: NZ_CP059054 Location: 1..54501 Organism: Pseudomonas putida strain BS3701 Replicon: plasmid pBS1142
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0H12_RS29530 () | 111..1094 | + | 984 | WP_180690215.1 | DNA-binding protein | - |
| H0H12_RS29535 () | 1134..1463 | + | 330 | WP_180690216.1 | hypothetical protein | - |
| H0H12_RS29540 () | 1556..1795 | + | 240 | WP_180690217.1 | hypothetical protein | - |
| H0H12_RS29545 () | 1862..2326 | + | 465 | WP_180690218.1 | DUF1311 domain-containing protein | - |
| H0H12_RS29550 () | 2576..2836 | - | 261 | WP_180690219.1 | hypothetical protein | - |
| H0H12_RS29555 () | 2995..3300 | + | 306 | WP_180690220.1 | hypothetical protein | - |
| H0H12_RS29560 () | 3517..4488 | - | 972 | WP_180690179.1 | AAA family ATPase | - |
| H0H12_RS29565 () | 4478..6139 | - | 1662 | WP_180690178.1 | DDE-type integrase/transposase/recombinase | - |
| H0H12_RS29570 () | 6120..6695 | - | 576 | WP_180690177.1 | recombinase family protein | - |
| H0H12_RS29575 () | 6824..7390 | - | 567 | WP_003159185.1 | recombinase family protein | - |
| H0H12_RS29580 () | 7572..7823 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| H0H12_RS29585 () | 7820..8215 | + | 396 | WP_003159186.1 | type II toxin-antitoxin system VapC family toxin | - |
| H0H12_RS29590 () | 8221..8556 | + | 336 | Protein_12 | transposase | - |
| H0H12_RS29595 () | 9035..9298 | + | 264 | WP_180690176.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| H0H12_RS29600 () | 9285..9566 | + | 282 | WP_180690175.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| H0H12_RS29605 () | 9603..9787 | + | 185 | Protein_15 | hypothetical protein | - |
| H0H12_RS29610 () | 9787..10035 | + | 249 | Protein_16 | hypothetical protein | - |
| H0H12_RS29615 () | 10125..11750 | - | 1626 | WP_180690174.1 | methyl-accepting chemotaxis protein | - |
| H0H12_RS29620 () | 12053..12910 | - | 858 | WP_180690173.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| H0H12_RS29625 () | 12898..15225 | - | 2328 | WP_180690172.1 | EAL domain-containing protein | - |
| H0H12_RS29630 () | 15381..18410 | - | 3030 | WP_010799689.1 | Tn3 family transposase | - |
| H0H12_RS29635 () | 18394..18996 | - | 603 | WP_010465829.1 | recombinase family protein | - |
| H0H12_RS29640 () | 19188..19565 | + | 378 | WP_003151133.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H0H12_RS29645 () | 19546..19881 | + | 336 | WP_001172026.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| H0H12_RS29650 () | 19896..20231 | + | 336 | WP_000741275.1 | hypothetical protein | - |
| H0H12_RS29655 () | 20255..20581 | + | 327 | WP_000091614.1 | hypothetical protein | - |
| H0H12_RS29660 () | 20578..20949 | + | 372 | WP_023294894.1 | hypothetical protein | - |
| H0H12_RS29665 () | 21241..21444 | - | 204 | WP_180690221.1 | hypothetical protein | - |
| H0H12_RS29670 () | 22228..22368 | + | 141 | WP_180690222.1 | hypothetical protein | - |
| H0H12_RS29675 () | 22519..22791 | + | 273 | WP_180690223.1 | hypothetical protein | - |
| H0H12_RS29680 () | 22796..23368 | + | 573 | WP_180690224.1 | recombinase family protein | - |
| H0H12_RS29685 () | 23379..23717 | + | 339 | WP_180690225.1 | hypothetical protein | - |
| H0H12_RS29690 () | 23721..24140 | + | 420 | WP_180690226.1 | hypothetical protein | - |
| H0H12_RS29695 () | 24289..24447 | - | 159 | WP_180690227.1 | hypothetical protein | - |
| H0H12_RS29700 () | 24588..24896 | - | 309 | WP_180690228.1 | hypothetical protein | - |
| H0H12_RS29705 () | 25461..25817 | - | 357 | WP_180690229.1 | hypothetical protein | - |
| H0H12_RS29710 () | 26026..26529 | - | 504 | WP_180690231.1 | hypothetical protein | - |
| H0H12_RS29715 () | 26807..28663 | - | 1857 | WP_180690230.1 | type I DNA topoisomerase | - |
| H0H12_RS29720 () | 28763..29338 | - | 576 | WP_180690232.1 | hypothetical protein | - |
| H0H12_RS29725 () | 29344..29787 | - | 444 | WP_180690192.1 | hypothetical protein | - |
| H0H12_RS29730 () | 29787..30713 | - | 927 | WP_180690193.1 | hypothetical protein | - |
| H0H12_RS29735 () | 30713..31543 | - | 831 | WP_180690194.1 | ParA family protein | - |
| H0H12_RS29740 () | 31547..33697 | - | 2151 | WP_180690195.1 | TraM recognition domain-containing protein | - |
| H0H12_RS29745 () | 35193..35963 | + | 771 | WP_180690196.1 | hypothetical protein | - |
| H0H12_RS29750 () | 35996..37039 | + | 1044 | WP_180690233.1 | Flp pilus assembly complex ATPase component TadA | - |
| H0H12_RS29755 () | 37483..37761 | + | 279 | WP_180690197.1 | hypothetical protein | - |
| H0H12_RS29760 () | 38602..39015 | + | 414 | WP_180690198.1 | hypothetical protein | - |
| H0H12_RS29765 () | 39733..40107 | + | 375 | WP_180690199.1 | hypothetical protein | - |
| H0H12_RS29770 () | 40104..40427 | + | 324 | WP_144940695.1 | hypothetical protein | - |
| H0H12_RS29775 () | 40429..42975 | + | 2547 | WP_180690200.1 | type IV secretion system protein B4 | - |
| H0H12_RS29780 () | 42979..43866 | + | 888 | WP_180690201.1 | hypothetical protein | - |
| H0H12_RS29785 () | 43877..44374 | + | 498 | WP_180690202.1 | hypothetical protein | - |
| H0H12_RS29790 () | 44374..45600 | + | 1227 | WP_180690203.1 | type IV secretion system protein | - |
| H0H12_RS29795 () | 45613..46392 | + | 780 | WP_180690204.1 | hypothetical protein | - |
| H0H12_RS29800 () | 46389..47237 | + | 849 | WP_180690205.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| H0H12_RS29805 () | 47247..48713 | + | 1467 | WP_180690206.1 | TrbI/VirB10 family protein | - |
| H0H12_RS29810 () | 48694..49071 | + | 378 | WP_180690207.1 | hypothetical protein | - |
| H0H12_RS29815 () | 49068..49262 | + | 195 | WP_180690208.1 | hypothetical protein | - |
| H0H12_RS29820 () | 49234..49995 | + | 762 | WP_180690209.1 | lytic transglycosylase domain-containing protein | - |
| H0H12_RS29825 () | 49992..50291 | + | 300 | WP_180690210.1 | hypothetical protein | - |
| H0H12_RS29830 () | 50315..50719 | + | 405 | WP_180690211.1 | hypothetical protein | - |
| H0H12_RS29835 () | 50740..50952 | + | 213 | WP_180690191.1 | hypothetical protein | - |
| H0H12_RS29840 () | 51315..51593 | + | 279 | WP_180690212.1 | hypothetical protein | - |
| H0H12_RS29845 () | 51735..51977 | + | 243 | WP_144940720.1 | plasmid replication protein RepB | - |
| H0H12_RS29850 () | 52154..53572 | + | 1419 | WP_180690213.1 | replication initiation protein | - |
| H0H12_RS29855 () | 53645..54031 | + | 387 | WP_180690214.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|