MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 79323 bp
Accession: NZ_CP059005 Location: 1..79323 Organism: Escherichia coli strain 2D Replicon: plasmid p2D-3
Accession: NZ_CP059005 Location: 1..79323 Organism: Escherichia coli strain 2D Replicon: plasmid p2D-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0E72_RS25160 () | 1301..2041 | - | 741 | WP_001586233.1 | tyrosine-type recombinase/integrase | - |
| H0E72_RS25165 () | 2162..2344 | - | 183 | WP_042004909.1 | hypothetical protein | - |
| H0E72_RS25170 () | 2411..2572 | - | 162 | WP_001440647.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H0E72_RS25175 () | 2688..2956 | - | 269 | Protein_4 | type II toxin-antitoxin system ParD family antitoxin | - |
| H0E72_RS25180 () | 3488..4657 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| H0E72_RS25185 () | 4690..4818 | + | 129 | Protein_6 | IS481 family transposase | - |
| H0E72_RS25190 () | 4853..5146 | - | 294 | WP_001105060.1 | hypothetical protein | - |
| H0E72_RS25195 () | 5252..5527 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H0E72_RS25200 () | 5527..5811 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| H0E72_RS25205 () | 6416..7168 | + | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| H0E72_RS25210 () | 7214..8179 | - | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| H0E72_RS25215 () | 8212..8592 | - | 381 | WP_023146450.1 | Rid family detoxifying hydrolase | - |
| H0E72_RS25220 () | 8617..9507 | - | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| H0E72_RS25225 () | 9908..10348 | + | 441 | Protein_14 | zinc-binding dehydrogenase | - |
| H0E72_RS25230 () | 10479..11357 | + | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| H0E72_RS25235 () | 11347..12234 | + | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| H0E72_RS25240 () | 12245..13069 | + | 825 | WP_000922702.1 | phosphodiesterase | - |
| H0E72_RS25245 () | 13075..14148 | + | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| H0E72_RS25250 () | 14141..15451 | + | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| H0E72_RS25255 () | 15510..15818 | - | 309 | Protein_20 | IS4 family transposase ISEc13 | Transposase |
| H0E72_RS25260 () | 15895..16128 | - | 234 | Protein_21 | Tn3 family transposase ISPsy39 | Transposase |
| H0E72_RS25265 () | 16150..17346 | - | 1197 | Protein_22 | IS3 family transposase | - |
| H0E72_RS25270 () | 17371..18075 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H0E72_RS25275 () | 18133..18663 | - | 531 | Protein_24 | histidine-type phosphatase | - |
| H0E72_RS25280 () | 18785..19270 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| H0E72_RS25285 () | 19295..19780 | - | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| H0E72_RS25290 () | 19767..20462 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| H0E72_RS25295 () | 20467..21597 | - | 1131 | WP_000729220.1 | ABC transporter permease | - |
| H0E72_RS25300 () | 21587..22870 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| H0E72_RS25305 () | 22873..24252 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| H0E72_RS25310 () | 24356..24883 | - | 528 | WP_000178050.1 | iron transporter | - |
| H0E72_RS25315 () | 24924..26810 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| H0E72_RS25320 () | 27157..27972 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| H0E72_RS25325 () | 28155..28661 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| H0E72_RS25330 () | 28651..28809 | - | 159 | WP_000449408.1 | DsbA family protein | - |
| H0E72_RS25335 () | 29272..29969 | + | 698 | Protein_36 | IS1 family transposase IS1X2 | Transposase |
| H0E72_RS25340 () | 30229..30822 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| H0E72_RS25345 () | 30935..32140 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| H0E72_RS25350 () | 32222..32845 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| H0E72_RS25355 () | 32823..33509 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| H0E72_RS25360 () | 33517..33903 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| H0E72_RS25365 () | 33896..34159 | - | 264 | WP_049802299.1 | antibiotic biosynthesis monooxygenase | - |
| H0E72_RS25370 () | 34156..34853 | - | 698 | Protein_43 | IS1 family transposase IS1R | Transposase |
| H0E72_RS25375 () | 34910..35179 | - | 270 | Protein_44 | dihydrofolate reductase | - |
| H0E72_RS25380 () | 35336..36349 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| H0E72_RS25385 () | 36552..36902 | + | 351 | WP_180555552.1 | DUF3330 domain-containing protein | - |
| H0E72_RS25390 () | 37028..37303 | + | 276 | Protein_47 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| H0E72_RS25395 () | 37356..38060 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H0E72_RS25400 () | 38124..38462 | + | 339 | Protein_49 | Tn3 family transposase TnpR_Tn3 | Transposase |
| H0E72_RS25405 () | 38645..39505 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| H0E72_RS25410 () | 39655..39933 | + | 279 | Protein_51 | IS91 family transposase | - |
| H0E72_RS25415 () | 40103..40807 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H0E72_RS25420 () | 40861..41909 | - | 1049 | Protein_53 | IS3 family transposase ISKpn11 | Transposase |
| H0E72_RS25425 () | 42001..42543 | - | 543 | WP_002063889.1 | AAA family ATPase | - |
| H0E72_RS25430 () | 42556..43416 | - | 861 | WP_000557452.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| H0E72_RS25435 () | 43523..44227 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H0E72_RS25440 () | 44293..44838 | + | 546 | Protein_57 | Tn3 family transposase TnpA_Tn3 | Transposase |
| H0E72_RS25445 () | 44874..45289 | - | 416 | Protein_58 | IS1 family transposase IS1R | Transposase |
| H0E72_RS25450 () | 45538..45939 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| H0E72_RS25455 () | 45872..46129 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| H0E72_RS25460 () | 46222..46875 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| H0E72_RS25465 () | 48089..48301 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| H0E72_RS25470 () | 48432..48794 | - | 363 | Protein_63 | fertility inhibition protein FinO | - |
| H0E72_RS25475 () | 48790..52041 | - | 3252 | Protein_64 | Multifunctional conjugation protein TraI | Relaxase |
| H0E72_RS25480 () | 52041..53741 | - | 1701 | WP_059290292.1 | type IV conjugative transfer system coupling protein TraD | - |
| H0E72_RS25485 () | 53725..55335 | - | 1611 | Protein_66 | conjugal transfer mating pair stabilization protein TraG | - |
| H0E72_RS25490 () | 55383..55473 | - | 91 | Protein_67 | conjugal transfer protein TraB | - |
| H0E72_RS25495 () | 55469..55921 | - | 453 | Protein_68 | DNA methylase | - |
| H0E72_RS25500 () | 55998..56302 | - | 305 | Protein_69 | hypothetical protein | - |
| H0E72_RS25505 () | 56306..57208 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| H0E72_RS25510 () | 58075..59046 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| H0E72_RS25515 () | 59046..60212 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| H0E72_RS25520 () | 60800..61555 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| H0E72_RS25525 () | 62329..63135 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| H0E72_RS25530 () | 63136..63441 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| H0E72_RS25535 () | 63443..63661 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| H0E72_RS25540 () | 64369..65364 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| H0E72_RS25545 () | 65368..66300 | + | 933 | WP_000991831.1 | hypothetical protein | - |
| H0E72_RS25550 () | 66593..66778 | + | 186 | WP_001586223.1 | hypothetical protein | - |
| H0E72_RS25555 () | 66779..67681 | + | 903 | WP_024187432.1 | hypothetical protein | - |
| H0E72_RS25560 () | 67683..68552 | + | 870 | WP_001586225.1 | hypothetical protein | - |
| H0E72_RS25565 () | 68609..70174 | - | 1566 | WP_001586226.1 | ATP-binding protein | - |
| H0E72_RS25570 () | 70461..70973 | + | 513 | WP_001586228.1 | hypothetical protein | - |
| H0E72_RS25575 () | 71007..72140 | - | 1134 | WP_000545985.1 | DUF3800 domain-containing protein | - |
| H0E72_RS25580 () | 72307..73079 | - | 773 | Protein_85 | hypothetical protein | - |
| H0E72_RS25585 () | 73108..73593 | - | 486 | WP_001403958.1 | hypothetical protein | - |
| H0E72_RS25590 () | 73984..76605 | + | 2622 | WP_001586230.1 | hypothetical protein | - |
| H0E72_RS25595 () | 76804..77034 | + | 231 | WP_001261274.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| H0E72_RS25600 () | 77123..77398 | + | 276 | WP_001403920.1 | type II toxin-antitoxin system VapC family toxin | - |
| H0E72_RS25605 () | 77403..77620 | - | 218 | Protein_90 | transposase | - |
| H0E72_RS25610 () | 77621..78151 | - | 531 | WP_000348883.1 | GNAT family N-acetyltransferase | - |
| H0E72_RS25615 () | 78155..78424 | - | 270 | WP_001275013.1 | DUF1778 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|