NZ_CP0589482013878..2025478

MGE detailed information

MGE type: Genomic_island        MGE length: 11601 bp
Accession: NZ_CP058948        Location: 2013878..2025478         Organism: Escherichia coli strain SY3626C5       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HZ988_RS09745 () 2010693..2012378 - 1686 WP_000628576.1 ABC transporter ATP-binding protein/permease -
HZ988_RS09750 () 2012581..2012703 + 123 WP_120795387.1 protein YneP -
HZ988_RS09755 () 2012669..2013826 - 1158 WP_001301030.1 anaerobic sulfatase maturase -
HZ988_RS09760 () 2013878..2015560 - 1683 WP_001295684.1 sulfatase -
HZ988_RS09765 () 2015962..2016723 - 762 WP_000060495.1 acid stress response transcriptional regulator YdeO -
HZ988_RS09770 () 2016798..2016995 - 198 WP_000543384.1 two-component system connector SafA -
HZ988_RS09775 () 2017243..2019522 - 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
HZ988_RS09780 () 2019856..2020770 - 915 WP_000520676.1 Type 1 fimbrin D-mannose specific adhesin VF
HZ988_RS09785 () 2020829..2021332 - 504 WP_000825452.1 Protein FimG VF
HZ988_RS09790 () 2021345..2021875 - 531 WP_000876763.1 Protein FimF VF
HZ988_RS09795 () 2021889..2023115 - 1227 Protein_1918 Outer membrane usher protein FimD VF
HZ988_RS09800 () 2023370..2023578 - 209 Protein_1919 helix-turn-helix transcriptional regulator -
HZ988_RS09805 () 2023890..2025212 - 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
HZ988_RS09810 () 2025212..2025478 - 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
HZ988_RS09815 () 2025701..2027101 - 1401 WP_001083595.1 autotransporter outer membrane beta-barrel domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.002
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0