MGE detailed information
MGE type: Conjugative plasmid MGE length: 98962 bp
Accession: NZ_CP058840 Location: 1..98962 Organism: Shigella flexneri strain STLEFF_34 Replicon: plasmid unnamed1
Accession: NZ_CP058840 Location: 1..98962 Organism: Shigella flexneri strain STLEFF_34 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT26_RS23305 (1) | 1..858 | + | 858 | WP_000130647.1 | incFII family plasmid replication initiator RepA | - |
| HZT26_RS23310 (1797) | 1797..2450 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HZT26_RS23315 (2543) | 2543..2800 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HZT26_RS23320 (2733) | 2733..3134 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HZT26_RS23325 (3383) | 3383..3798 | + | 416 | Protein_4 | IS1 family transposase IS1R | Transposase |
| HZT26_RS23330 (3834) | 3834..4379 | - | 546 | Protein_5 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HZT26_RS23335 (4445) | 4445..5149 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZT26_RS23340 (5214) | 5214..5894 | - | 681 | Protein_7 | IS91 family transposase ISAzo26 | Transposase |
| HZT26_RS23345 (6074) | 6074..6628 | + | 555 | WP_032488579.1 | aminoglycoside N-acetyltransferase AAC(6')-Ib3 | - |
| HZT26_RS23350 (6895) | 6895..8154 | + | 1260 | Protein_9 | Inner membrane transport protein YdhC | ARG |
| HZT26_RS23355 (8346) | 8346..8693 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| HZT26_RS23360 (8687) | 8687..8896 | + | 210 | Protein_11 | dihydropteroate synthase | - |
| HZT26_RS23365 (9085) | 9085..10086 | - | 1002 | WP_139003267.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| HZT26_RS23370 (10317) | 10317..10889 | + | 573 | Protein_13 | IS1380 family transposase ISEcp1 | Transposase |
| HZT26_RS23375 (10946) | 10946..11914 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| HZT26_RS23380 (11949) | 11949..12824 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| HZT26_RS23385 (13074) | 13074..13361 | - | 288 | Protein_16 | transposase | - |
| HZT26_RS23390 (13427) | 13427..14131 | + | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| HZT26_RS23395 (14454) | 14454..15938 | - | 1485 | WP_194280410.1 | IS91 family transposase ISVsa3 | Transposase |
| HZT26_RS23400 (16213) | 16213..16554 | - | 342 | WP_023909256.1 | 60 kDa chaperonin 2 | VF |
| HZT26_RS23405 (16515) | 16515..16964 | - | 450 | WP_013362817.1 | hypothetical protein | - |
| HZT26_RS23410 (17594) | 17594..18331 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| HZT26_RS23415 (18457) | 18457..18552 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| HZT26_RS23420 (18687) | 18687..19391 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZT26_RS23425 (19513) | 19513..20418 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| HZT26_RS23430 (20415) | 20415..21653 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| HZT26_RS23435 (21653) | 21653..22237 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| HZT26_RS23440 (22730) | 22730..23494 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| HZT26_RS23445 (23662) | 23662..24366 | - | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| HZT26_RS23450 (24391) | 24391..24915 | + | 525 | WP_050195267.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HZT26_RS23455 (24992) | 24992..26383 | + | 1392 | WP_000085084.1 | SIR2 family protein | - |
| HZT26_RS23460 (26380) | 26380..28452 | + | 2073 | WP_001084041.1 | DUF87 domain-containing protein | - |
| HZT26_RS23465 (28642) | 28642..28881 | - | 240 | WP_000371884.1 | hypothetical protein | - |
| HZT26_RS23470 (29155) | 29155..29646 | + | 492 | WP_000528930.1 | HEPN family nuclease | - |
| HZT26_RS23475 (29658) | 29658..30416 | + | 759 | WP_000494510.1 | hypothetical protein | - |
| HZT26_RS23480 (30707) | 30707..32230 | + | 1524 | WP_000921251.1 | hypothetical protein | - |
| HZT26_RS23485 (32265) | 32265..33389 | + | 1125 | WP_000386705.1 | DUF4238 domain-containing protein | - |
| HZT26_RS23490 (33389) | 33389..33679 | + | 291 | WP_000648897.1 | hypothetical protein | - |
| HZT26_RS23495 (34496) | 34496..34714 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HZT26_RS23500 (34716) | 34716..35021 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HZT26_RS23505 (35022) | 35022..35831 | + | 810 | WP_000016963.1 | site-specific integrase | - |
| HZT26_RS23510 (36003) | 36003..36356 | + | 354 | WP_000864813.1 | colicin M immunity protein | - |
| HZT26_RS23515 (36406) | 36406..36975 | - | 570 | Protein_42 | lipid II-degrading bacteriocin colicin M | - |
| HZT26_RS23520 (37032) | 37032..37729 | + | 698 | WP_240763292.1 | IS1 family transposase | - |
| HZT26_RS23525 (37887) | 37887..38759 | - | 873 | WP_000794337.1 | hypothetical protein | - |
| HZT26_RS23530 (38990) | 38990..39687 | + | 698 | WP_223200906.1 | IS1 family transposase IS1R | Transposase |
| HZT26_RS23535 (39703) | 39703..40293 | - | 591 | Protein_46 | colicin-like bacteriocin tRNase domain-containing protein | - |
| HZT26_RS23540 (40473) | 40473..40905 | + | 433 | Protein_47 | tyrosine-type recombinase/integrase | - |
| HZT26_RS23545 (41097) | 41097..41372 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| HZT26_RS23550 (41366) | 41366..42010 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| HZT26_RS23555 (42239) | 42239..43210 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| HZT26_RS23560 (43215) | 43215..43607 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| HZT26_RS23565 (43612) | 43612..44883 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| HZT26_RS23570 (44883) | 44883..45320 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HZT26_RS23575 (45317) | 45317..45565 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| HZT26_RS23580 (45983) | 45983..46885 | + | 903 | WP_001302618.1 | DUF1281 domain-containing protein | - |
| HZT26_RS23585 (46882) | 46882..47193 | + | 312 | WP_032317461.1 | hypothetical protein | - |
| HZT26_RS23590 (47270) | 47270..47953 | + | 684 | WP_113421878.1 | DNA methylase | - |
| HZT26_RS23595 (47954) | 47954..48175 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| HZT26_RS23600 (48156) | 48156..48623 | + | 468 | WP_023156300.1 | DUF1380 family protein | - |
| HZT26_RS23605 (48668) | 48668..49438 | + | 771 | WP_001006221.1 | hypothetical protein | - |
| HZT26_RS23610 (49856) | 49856..50281 | + | 426 | WP_001198872.1 | antirestriction protein | - |
| HZT26_RS23615 (50328) | 50328..50750 | + | 423 | WP_000271726.1 | DUF1380 family protein | - |
| HZT26_RS23620 (50747) | 50747..50938 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| HZT26_RS23625 (51210) | 51210..51458 | - | 249 | WP_077879799.1 | hypothetical protein | - |
| HZT26_RS23630 (51976) | 51976..52206 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| HZT26_RS23635 (52258) | 52258..53619 | + | 1362 | WP_000170675.1 | DUF3560 domain-containing protein | - |
| HZT26_RS23640 (53667) | 53667..54230 | + | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| HZT26_RS23645 (54382) | 54382..54753 | + | 372 | WP_223372515.1 | hypothetical protein | - |
| HZT26_RS23650 (54898) | 54898..55104 | + | 207 | WP_015059635.1 | hypothetical protein | - |
| HZT26_RS23655 (55130) | 55130..55582 | + | 453 | WP_063072992.1 | single-stranded DNA-binding protein | - |
| HZT26_RS23660 (55644) | 55644..55877 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| HZT26_RS23665 (55942) | 55942..57900 | + | 1959 | WP_063072993.1 | ParB/RepB/Spo0J family partition protein | - |
| HZT26_RS23670 (57955) | 57955..58389 | + | 435 | WP_000845907.1 | conjugation system SOS inhibitor PsiB | - |
| HZT26_RS23675 (58386) | 58386..59105 | + | 720 | WP_001276240.1 | plasmid SOS inhibition protein A | - |
| HZT26_RS23680 (59117) | 59117..59305 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - (59117) | 59117..59341 | + | 225 | NuclAT_0 | - | - |
| - (59117) | 59117..59341 | + | 225 | NuclAT_0 | - | - |
| - (59117) | 59117..59341 | + | 225 | NuclAT_0 | - | - |
| - (59117) | 59117..59341 | + | 225 | NuclAT_0 | - | - |
| HZT26_RS23685 (59327) | 59327..59476 | + | 150 | Protein_76 | plasmid maintenance protein Mok | - |
| HZT26_RS23690 (59418) | 59418..59543 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HZT26_RS23695 (59763) | 59763..59993 | + | 231 | WP_071845785.1 | hypothetical protein | - |
| HZT26_RS23700 (59991) | 59991..60164 | - | 174 | Protein_79 | hypothetical protein | - |
| HZT26_RS23705 (60234) | 60234..60440 | + | 207 | WP_063609967.1 | hypothetical protein | - |
| HZT26_RS23710 (60465) | 60465..60752 | + | 288 | WP_063072995.1 | hypothetical protein | - |
| HZT26_RS23715 (60871) | 60871..61692 | + | 822 | WP_001241365.1 | DUF932 domain-containing protein | - |
| HZT26_RS23720 (61989) | 61989..62579 | - | 591 | WP_222908884.1 | hypothetical protein | VF |
| HZT26_RS23725 (62982) | 62982..63365 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HZT26_RS23730 (63552) | 63552..64241 | + | 690 | WP_000283379.1 | conjugal transfer transcriptional regulator TraJ | - |
| HZT26_RS23735 (64334) | 64334..64735 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| HZT26_RS23740 (64768) | 64768..65133 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| HZT26_RS23745 (65148) | 65148..65459 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HZT26_RS23750 (65481) | 65481..66047 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| HZT26_RS23755 (66034) | 66034..66762 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| HZT26_RS23760 (66762) | 66762..68189 | + | 1428 | WP_000146638.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| HZT26_RS23765 (68179) | 68179..68763 | + | 585 | WP_000002795.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| HZT26_RS23770 (68750) | 68750..69070 | + | 321 | WP_001057302.1 | conjugal transfer protein TrbD | - |
| HZT26_RS23775 (69063) | 69063..69314 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| HZT26_RS23780 (69311) | 69311..69826 | + | 516 | WP_000809893.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HZT26_RS23785 (69961) | 69961..70182 | + | 222 | WP_072651814.1 | conjugal transfer protein TraR | - |
| HZT26_RS23790 (70342) | 70342..72969 | + | 2628 | WP_113421867.1 | type IV secretion system protein TraC | - |
| HZT26_RS23795 (72966) | 72966..73352 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| HZT26_RS23800 (73349) | 73349..73981 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| HZT26_RS23805 (73978) | 73978..74970 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| HZT26_RS23810 (75000) | 75000..75305 | + | 306 | WP_000224411.1 | hypothetical protein | - |
| HZT26_RS23815 (75314) | 75314..75952 | + | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HZT26_RS23820 (75949) | 75949..77757 | + | 1809 | WP_000821863.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HZT26_RS23825 (77784) | 77784..78041 | + | 258 | WP_000864320.1 | conjugal transfer protein TrbE | - |
| HZT26_RS23830 (78034) | 78034..78777 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HZT26_RS23835 (78793) | 78793..79131 | + | 339 | WP_001287905.1 | conjugal transfer protein TrbA | - |
| HZT26_RS23840 (79258) | 79258..79542 | + | 285 | WP_001448202.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HZT26_RS23845 (79529) | 79529..80074 | + | 546 | WP_000059824.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HZT26_RS23850 (80004) | 80004..80344 | + | 341 | Protein_109 | P-type conjugative transfer protein TrbJ | - |
| HZT26_RS23855 (80325) | 80325..80717 | + | 393 | WP_000660703.1 | F-type conjugal transfer protein TrbF | - |
| HZT26_RS23860 (80704) | 80704..82077 | + | 1374 | WP_112901602.1 | conjugal transfer pilus assembly protein TraH | - |
| HZT26_RS23865 (82074) | 82074..84893 | + | 2820 | WP_113421866.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| HZT26_RS23870 (84912) | 84912..85409 | + | 498 | WP_000605861.1 | hypothetical protein | - |
| HZT26_RS23875 (85441) | 85441..86172 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| HZT26_RS23880 (86425) | 86425..88623 | + | 2199 | WP_000009360.1 | type IV conjugative transfer system coupling protein TraD | - |
| HZT26_RS23885 (88623) | 88623..93893 | + | 5271 | WP_000986934.1 | Multifunctional conjugation protein TraI | Relaxase |
| HZT26_RS23890 (93913) | 93913..94659 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| HZT26_RS23895 (94718) | 94718..95578 | + | 861 | WP_000704528.1 | putative protein YcjY | VF |
| HZT26_RS23900 (95681) | 95681..96241 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| HZT26_RS23905 (96370) | 96370..96582 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| HZT26_RS23910 (96827) | 96827..97288 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| HZT26_RS23915 (97334) | 97334..97543 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| HZT26_RS23920 (97581) | 97581..98171 | + | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| HZT26_RS23925 (98411) | 98411..98671 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| HZT26_RS23930 (98765) | 98765..98950 | + | 186 | WP_012615301.1 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|