MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 121463 bp
Accession: NZ_CP058772 Location: 1..121463 Organism: Shigella flexneri strain STLIN_11 Replicon: plasmid unnamed1
Accession: NZ_CP058772 Location: 1..121463 Organism: Shigella flexneri strain STLIN_11 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZS97_RS23630 (1) | 1..858 | + | 858 | WP_000131009.1 | incFII family plasmid replication initiator RepA | - |
| HZS97_RS23635 (1797) | 1797..2450 | + | 654 | WP_284527040.1 | CPBP family intramembrane metalloprotease | - |
| HZS97_RS23640 (2543) | 2543..2800 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HZS97_RS23645 (2733) | 2733..3134 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HZS97_RS23650 (3419) | 3419..4729 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| HZS97_RS23655 (4758) | 4758..4856 | + | 99 | Protein_5 | IS1 family transposase | - |
| HZS97_RS23660 (5006) | 5006..5866 | - | 861 | WP_000027057.1 | broad-spectrum class A beta-lactamase TEM-1 | - |
| HZS97_RS23665 (6108) | 6108..6812 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HZS97_RS23670 (6861) | 6861..7766 | - | 906 | Protein_8 | IS4-like element ISVsa5 family transposase | - |
| HZS97_RS23675 (7876) | 7876..8838 | - | 963 | Protein_9 | IS4-like element ISVsa5 family transposase | - |
| HZS97_RS23680 (8981) | 8981..9841 | + | 861 | WP_000557454.1 | aminoglycoside N-acetyltransferase AAC(3)-IId | - |
| HZS97_RS23685 (9854) | 9854..10396 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| HZS97_RS23690 (10934) | 10934..11638 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HZS97_RS23695 (11828) | 11828..12643 | - | 816 | WP_000018321.1 | aminoglycoside O-phosphotransferase APH(3')-Ia | - |
| HZS97_RS23700 (12794) | 12794..13498 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HZS97_RS23705 (13555) | 13555..13800 | + | 246 | Protein_15 | hypothetical protein | - |
| HZS97_RS23710 (13946) | 13946..14808 | + | 863 | Protein_16 | SDR family oxidoreductase | - |
| HZS97_RS23715 (14846) | 14846..15091 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| HZS97_RS23720 (15560) | 15560..16351 | + | 792 | WP_000034420.1 | sulfonamide-resistant dihydropteroate synthase Sul3 | - |
| HZS97_RS23725 (16609) | 16609..17469 | - | 861 | WP_000027057.1 | broad-spectrum class A beta-lactamase TEM-1 | - |
| HZS97_RS23730 (17652) | 17652..18209 | - | 558 | WP_001235713.1 | recombinase family protein | - |
| HZS97_RS23735 (18502) | 18502..19206 | - | 705 | WP_169724930.1 | IS6-like element IS26 family transposase | - |
| HZS97_RS23740 (19359) | 19359..20180 | - | 822 | WP_284527041.1 | lincosamide nucleotidyltransferase Lnu(F) | - |
| HZS97_RS23745 (20265) | 20265..21103 | - | 839 | Protein_23 | AadA family aminoglycoside 3''-O-nucleotidyltransferase | - |
| HZS97_RS23750 (21249) | 21249..22047 | + | 799 | Protein_24 | class 1 integron integrase IntI1 | - |
| HZS97_RS23755 (22100) | 22100..22803 | - | 704 | Protein_25 | IS6-like element IS26 family transposase | - |
| HZS97_RS23760 (22912) | 22912..23169 | - | 258 | WP_231363335.1 | hypothetical protein | - |
| HZS97_RS23765 (23271) | 23271..24932 | - | 1662 | Protein_27 | Tn3 family transposase | - |
| HZS97_RS23770 (24895) | 24895..25329 | + | 435 | WP_223963367.1 | isochorismatase family cysteine hydrolase | - |
| HZS97_RS23775 (25467) | 25467..26351 | + | 885 | WP_284527042.1 | EamA family transporter | - |
| HZS97_RS23780 (26383) | 26383..27582 | - | 1200 | WP_001493765.1 | tetracycline efflux MFS transporter Tet(A) | - |
| HZS97_RS23785 (27688) | 27688..28338 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HZS97_RS23790 (28370) | 28370..28612 | - | 243 | WP_000844627.1 | transposase | - |
| HZS97_RS23795 (28670) | 28670..30182 | - | 1513 | Protein_33 | Tn3-like element TnAs1 family transposase | - |
| HZS97_RS23800 (30248) | 30248..30952 | + | 705 | WP_281441346.1 | IS6 family transposase | - |
| HZS97_RS23805 (31200) | 31200..31487 | + | 288 | WP_230071785.1 | hypothetical protein | - |
| HZS97_RS23815 (32864) | 32864..33679 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| HZS97_RS23820 (33766) | 33766..34008 | + | 243 | Protein_38 | phosphoglucosamine mutase | - |
| HZS97_RS23825 (34244) | 34244..35737 | - | 1494 | WP_284527043.1 | IS91-like element ISVsa3 family transposase | - |
| HZS97_RS23830 (35849) | 35849..36154 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| HZS97_RS23835 (36182) | 36182..37396 | - | 1215 | WP_023300759.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| HZS97_RS23840 (37613) | 37613..38497 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| HZS97_RS23845 (38528) | 38528..39357 | - | 830 | Protein_43 | IS91-like element ISVsa3 family transposase | - |
| HZS97_RS23850 (39421) | 39421..40125 | + | 705 | WP_001067784.1 | IS6-like element IS1006 family transposase | - |
| HZS97_RS23855 (40210) | 40210..40686 | - | 477 | WP_223171565.1 | hypothetical protein | - |
| HZS97_RS23860 (40620) | 40620..43586 | - | 2967 | WP_001138064.1 | Tn3-like element TnAs3 family transposase | - |
| HZS97_RS23865 (43589) | 43589..44149 | - | 561 | WP_000147567.1 | recombinase family protein | - |
| HZS97_RS23870 (44275) | 44275..44625 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HZS97_RS23875 (44828) | 44828..45841 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| HZS97_RS23880 (45986) | 45986..46483 | + | 498 | WP_151292574.1 | trimethoprim-resistant dihydrofolate reductase DfrA12 | - |
| HZS97_RS23885 (46595) | 46595..46885 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| HZS97_RS23890 (46891) | 46891..47731 | + | 841 | Protein_52 | AadA family aminoglycoside 3''-O-nucleotidyltransferase | - |
| HZS97_RS23895 (47946) | 47946..49204 | + | 1259 | Protein_53 | CmlA family chloramphenicol efflux MFS transporter | - |
| HZS97_RS23900 (49297) | 49297..50134 | + | 838 | Protein_54 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| HZS97_RS23905 (50257) | 50257..50589 | + | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| HZS97_RS23910 (50836) | 50836..51468 | - | 633 | WP_020802982.1 | IS256 family transposase | - |
| HZS97_RS23915 (51491) | 51491..51721 | + | 231 | WP_136655701.1 | hypothetical protein | - |
| HZS97_RS23920 (51729) | 51729..51896 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| HZS97_RS23925 (52015) | 52015..53934 | - | 1920 | WP_025989258.1 | tetracycline resistance ribosomal protection protein Tet(M) | - |
| HZS97_RS23930 (53950) | 53950..54066 | - | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| HZS97_RS23935 (54311) | 54311..54778 | - | 468 | Protein_61 | conjugal transfer protein | - |
| HZS97_RS23940 (54832) | 54832..55536 | - | 705 | WP_169724930.1 | IS6-like element IS26 family transposase | - |
| HZS97_RS23945 (55599) | 55599..56009 | + | 411 | Protein_63 | IS3 family transposase | - |
| HZS97_RS23950 (56096) | 56096..56291 | + | 196 | Protein_64 | serine/threonine protein kinase | - |
| HZS97_RS23955 (56412) | 56412..57143 | + | 732 | Protein_65 | site-specific integrase | - |
| HZS97_RS23960 (57438) | 57438..58415 | - | 978 | WP_284527044.1 | RepB family plasmid replication initiator protein | - |
| HZS97_RS23965 (59161) | 59161..59484 | + | 324 | Protein_67 | IS21 family transposase | - |
| HZS97_RS23970 (59486) | 59486..59590 | + | 105 | Protein_68 | AAA family ATPase | - |
| HZS97_RS23975 (59651) | 59651..60157 | + | 507 | Protein_69 | DUF4113 domain-containing protein | - |
| HZS97_RS23985 (61409) | 61409..62323 | + | 915 | WP_284527026.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| HZS97_RS23990 (62323) | 62323..63150 | + | 828 | WP_284527027.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| HZS97_RS23995 (63147) | 63147..64004 | + | 858 | WP_284527028.1 | iron/manganese ABC transporter permease subunit SitC | - |
| HZS97_RS24000 (64001) | 64001..64857 | + | 857 | Protein_74 | iron/manganese ABC transporter permease subunit SitD | - |
| HZS97_RS24005 (65091) | 65091..65348 | - | 258 | Protein_75 | Tn3 family transposase | - |
| HZS97_RS24010 (65346) | 65346..65759 | + | 414 | Protein_76 | phosphopyruvate hydratase | - |
| HZS97_RS24020 (66877) | 66877..67257 | + | 381 | WP_284527029.1 | fluoride efflux transporter CrcB | - |
| HZS97_RS24025 (67637) | 67637..68830 | - | 1194 | WP_097509567.1 | MFS transporter | - |
| HZS97_RS24030 (68966) | 68966..70690 | + | 1725 | WP_284527030.1 | NIS family aerobactin synthetase IucA | - |
| HZS97_RS24035 (70691) | 70691..71639 | + | 949 | Protein_81 | N(6)-hydroxylysine O-acetyltransferase IucB | - |
| HZS97_RS24040 (71639) | 71639..73380 | + | 1742 | Protein_82 | NIS family aerobactin synthetase IucC | - |
| HZS97_RS24045 (73377) | 73377..74654 | + | 1278 | WP_284527031.1 | NADPH-dependent L-lysine N(6)-monooxygenase IucD | - |
| HZS97_RS24050 (74743) | 74743..76936 | + | 2194 | Protein_84 | ferric aerobactin receptor IutA | - |
| HZS97_RS24055 (77462) | 77462..78148 | + | 687 | Protein_85 | IS1 family transposase | - |
| HZS97_RS24060 (78400) | 78400..79423 | - | 1024 | Protein_86 | DNA helicase UvrD | - |
| HZS97_RS24065 (79408) | 79408..80973 | - | 1566 | WP_151316214.1 | AAA family ATPase | - |
| HZS97_RS24070 (81048) | 81048..81463 | - | 416 | Protein_88 | type II toxin-antitoxin system VapC family toxin | - |
| HZS97_RS24075 (81460) | 81460..81690 | - | 231 | WP_284527032.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| HZS97_RS24080 (82250) | 82250..82468 | + | 219 | WP_284527033.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HZS97_RS24085 (82470) | 82470..82775 | + | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HZS97_RS24090 (82776) | 82776..83582 | + | 807 | WP_284527034.1 | site-specific integrase | - |
| HZS97_RS24095 (84304) | 84304..85060 | + | 757 | Protein_93 | replication initiation protein RepE | - |
| HZS97_RS24100 (85648) | 85648..86815 | + | 1168 | Protein_94 | plasmid-partitioning protein SopA | - |
| HZS97_RS24105 (86815) | 86815..87786 | + | 972 | WP_284527035.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HZS97_RS24110 (88521) | 88521..89423 | + | 903 | WP_001302618.1 | DUF1281 domain-containing protein | - |
| HZS97_RS24115 (89420) | 89420..89731 | + | 312 | WP_032317461.1 | hypothetical protein | - |
| HZS97_RS24120 (89808) | 89808..90491 | + | 684 | WP_063072991.1 | DNA methylase | - |
| HZS97_RS24125 (90492) | 90492..90713 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| HZS97_RS24130 (90694) | 90694..91161 | + | 468 | WP_023156300.1 | DUF1380 family protein | - |
| HZS97_RS24135 (91206) | 91206..91976 | + | 771 | WP_001006212.1 | hypothetical protein | - |
| HZS97_RS24140 (92389) | 92389..92814 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| HZS97_RS24145 (92861) | 92861..93283 | + | 423 | WP_000271684.1 | DUF1380 family protein | - |
| HZS97_RS24150 (93280) | 93280..93471 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| HZS97_RS24155 (93900) | 93900..94604 | - | 705 | WP_151295400.1 | IS6-like element IS26 family transposase | - |
| HZS97_RS24160 (94668) | 94668..96422 | + | 1755 | Protein_106 | type IV conjugative transfer system coupling protein TraD | - |
| HZS97_RS24165 (96422) | 96422..101542 | + | 5121 | WP_284527036.1 | conjugative transfer relaxase/helicase TraI | - |
| HZS97_RS24170 (101562) | 101562..102305 | + | 744 | WP_000205704.1 | conjugal transfer pilus acetylase TraX | - |
| HZS97_RS24175 (102360) | 102360..102920 | + | 561 | WP_024184455.1 | fertility inhibition protein FinO | - |
| HZS97_RS24180 (103056) | 103056..103268 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| HZS97_RS24185 (103570) | 103570..103659 | - | 90 | Protein_111 | IS1 family transposase | - |
| HZS97_RS24190 (103714) | 103714..104391 | + | 678 | WP_001339397.1 | IS66-like element accessory protein TnpA | - |
| HZS97_RS24195 (104391) | 104391..104739 | + | 349 | Protein_113 | IS66 family insertion sequence element accessory protein TnpB | - |
| HZS97_RS24200 (104759) | 104759..106330 | + | 1572 | WP_284527037.1 | IS66 family transposase | - |
| HZS97_RS24205 (106368) | 106368..106984 | - | 617 | Protein_115 | IS1-like element IS1A family transposase | - |
| HZS97_RS24210 (107085) | 107085..107267 | + | 183 | WP_000968309.1 | hypothetical protein | - |
| - (107406) | 107406..107467 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (107406) | 107406..107467 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (107406) | 107406..107467 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (107406) | 107406..107467 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| HZS97_RS24215 (107511) | 107511..107660 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| HZS97_RS24220 (107944) | 107944..108201 | + | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| HZS97_RS24225 (108436) | 108436..108510 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| HZS97_RS24230 (108503) | 108503..108949 | + | 447 | Protein_120 | plasmid replication initiator RepA | - |
| HZS97_RS24235 (108949) | 108949..109563 | - | 615 | Protein_121 | VENN motif pre-toxin domain-containing protein | - |
| HZS97_RS24240 (110270) | 110270..111489 | + | 1220 | Protein_122 | arginine deiminase | - |
| HZS97_RS24245 (111500) | 111500..112410 | + | 911 | Protein_123 | carbamate kinase | - |
| HZS97_RS24250 (112495) | 112495..113499 | + | 1005 | WP_000154545.1 | ornithine carbamoyltransferase | - |
| HZS97_RS24255 (113547) | 113547..114950 | + | 1404 | WP_000514417.1 | YfcC family protein | - |
| HZS97_RS24260 (115031) | 115031..115510 | + | 480 | WP_001496175.1 | ArgR family transcriptional regulator | - |
| HZS97_RS24265 (115574) | 115574..115915 | - | 342 | Protein_127 | transposase | - |
| HZS97_RS24270 (115867) | 115867..116088 | - | 222 | WP_000080227.1 | hypothetical protein | - |
| HZS97_RS24275 (116119) | 116119..116469 | - | 351 | WP_284527038.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| HZS97_RS24280 (116466) | 116466..116822 | - | 357 | WP_000229735.1 | transposase | - |
| HZS97_RS24285 (116937) | 116937..117633 | - | 697 | Protein_131 | IS1-like element IS1A family transposase | - |
| HZS97_RS24290 (117666) | 117666..118244 | + | 579 | WP_032142246.1 | DUF2726 domain-containing protein | - |
| HZS97_RS24295 (118657) | 118657..119010 | - | 354 | WP_000005489.1 | hypothetical protein | - |
| HZS97_RS24300 (119476) | 119476..120498 | - | 1023 | WP_284527039.1 | IS110 family transposase | - |
| HZS97_RS24305 (120905) | 120905..121162 | + | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| HZS97_RS24310 (121266) | 121266..121451 | + | 186 | Protein_136 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|