NZ_CP0587401103839..1298421

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 194583 bp
Accession: NZ_CP058740        Location: 1103839..1298421         Organism: Streptococcus suis strain 16085/3b       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
SSU16085_RS05230 () 1099497..1100243 + 747 WP_002937637.1 potassium channel family protein -
SSU16085_RS05235 () 1100318..1100719 + 402 WP_009909989.1 Spx/MgsR family RNA polymerase-binding regulatory protein -
SSU16085_RS05240 () 1100734..1101012 + 279 WP_024383710.1 UPF0223 family protein -
SSU16085_RS05245 () 1101002..1101760 + 759 WP_024394633.1 inositol monophosphatase family protein -
SSU16085_RS05250 () 1101760..1103061 + 1302 WP_024394632.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase -
SSU16085_RS05255 () 1103199..1104068 + 870 WP_024387442.1 phosphate ABC transporter substrate-binding protein PstS family protein -
SSU16085_RS05260 () 1104071..1104988 + 918 WP_002937619.1 phosphate ABC transporter permease subunit PstC -
SSU16085_RS05265 () 1104978..1105865 + 888 WP_002937616.1 phosphate ABC transporter permease PstA -
SSU16085_RS05270 () 1105890..1106693 + 804 WP_002937615.1 phosphate ABC transporter ATP-binding protein -
SSU16085_RS05275 () 1106705..1107463 + 759 WP_002937614.1 Phosphate import ATP-binding protein PstB 3 VF
SSU16085_RS05280 () 1107492..1108148 + 657 WP_192062934.1 phosphate signaling complex protein PhoU -
SSU16085_RS05285 () 1108314..1108649 + 336 Protein_1009 hypothetical protein -
SSU16085_RS05290 () 1108843..1109514 + 672 WP_024385291.1 Response regulator ArlR VF
SSU16085_RS05295 () 1109507..1110886 + 1380 WP_024394629.1 HAMP domain-containing histidine kinase -
SSU16085_RS05300 () 1111210..1112439 + 1230 WP_024394628.1 transglutaminase -
SSU16085_RS05305 () 1112701..1112949 - 249 WP_012027069.1 30S ribosomal protein S20 -
SSU16085_RS05310 () 1113008..1113928 - 921 WP_024381359.1 type I pantothenate kinase -
SSU16085_RS05315 () 1114037..1114627 + 591 WP_009909951.1 class I SAM-dependent methyltransferase -
SSU16085_RS05320 () 1114624..1115901 + 1278 WP_024381358.1 pyrimidine-nucleoside phosphorylase -
SSU16085_RS05325 () 1115917..1116579 + 663 WP_002935276.1 deoxyribose-phosphate aldolase -
SSU16085_RS05330 () 1116566..1116955 + 390 WP_012775156.1 cytidine deaminase -
SSU16085_RS05335 () 1117036..1118103 + 1068 WP_192062935.1 BMP family protein -
SSU16085_RS05340 () 1118297..1119832 + 1536 WP_023370002.1 ABC transporter ATP-binding protein -
SSU16085_RS05345 () 1119825..1120886 + 1062 WP_024394627.1 ABC transporter permease -
SSU16085_RS05350 () 1120888..1121841 + 954 WP_012775589.1 ABC transporter permease -
SSU16085_RS05355 () 1122139..1122534 + 396 WP_012027059.1 dihydrofolate reductase family protein -
SSU16085_RS05360 () 1122538..1122771 + 234 WP_024394626.1 dihydrofolate reductase family protein -
SSU16085_RS05365 () 1122814..1123797 - 984 WP_002935259.1 L-lactate dehydrogenase -
SSU16085_RS05370 () 1123986..1126430 + 2445 WP_024383413.1 DNA gyrase subunit A -
SSU16085_RS05375 () 1126437..1127186 + 750 WP_023370009.1 hypothetical protein VF
SSU16085_RS05380 () 1127300..1127980 + 681 WP_002935253.1 DNA repair protein RadC -
SSU16085_RS05385 () 1127977..1128669 - 693 WP_043032883.1 Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD VF
SSU16085_RS05390 () 1128673..1129311 - 639 WP_043032884.1 redox-sensing transcriptional repressor Rex -
SSU16085_RS05395 () 1129446..1129649 - 204 WP_002940737.1 DUF4649 family protein -
SSU16085_RS05400 () 1129651..1129995 - 345 WP_002935248.1 DUF1831 domain-containing protein -
SSU16085_RS05405 () 1129997..1131112 - 1116 WP_043032885.1 cysteine desulfurase -
SSU16085_RS05410 () 1131123..1132100 - 978 WP_043032886.1 ribose-phosphate diphosphokinase -
SSU16085_RS05415 () 1132245..1132811 - 567 WP_002935243.1 CYTH domain-containing protein -
SSU16085_RS05420 () 1132898..1133569 + 672 WP_002935242.1 GTP pyrophosphokinase family protein -
SSU16085_RS05425 () 1133544..1134371 + 828 WP_032497578.1 NAD kinase -
SSU16085_RS05430 () 1134371..1135264 + 894 WP_043032887.1 RluA family pseudouridine synthase -
SSU16085_RS05435 () 1135282..1136256 + 975 WP_002935239.1 phosphate acetyltransferase -
SSU16085_RS05440 () 1136258..1137997 + 1740 WP_043032888.1 ABC transporter ATP-binding protein/permease -
SSU16085_RS05445 () 1137984..1139726 + 1743 WP_044675557.1 putative ABC transporter ATP-binding protein VF
SSU16085_RS05450 () 1139710..1140102 + 393 WP_029693807.1 PaaI family thioesterase -
SSU16085_RS05455 () 1140286..1141446 + 1161 WP_024381349.1 A/G-specific adenine glycosylase -
SSU16085_RS05460 () 1142109..1142909 - 801 WP_043032890.1 XRE family transcriptional regulator -
SSU16085_RS05465 () 1143040..1143510 + 471 WP_024381347.1 hypothetical protein -
SSU16085_RS05470 () 1143530..1144072 + 543 WP_024381346.1 hypothetical protein -
SSU16085_RS05475 () 1144298..1145341 - 1044 WP_024394623.1 Tyrosine recombinase XerD ; Integrase Integrase
SSU16085_RS05480 () 1145716..1146471 - 756 WP_192062936.1 hypothetical protein -
SSU16085_RS05485 () 1146750..1147517 + 768 WP_024381344.1 DeoR/GlpR family DNA-binding transcription regulator -
SSU16085_RS05490 () 1147723..1148145 + 423 WP_024381343.1 galactose-6-phosphate isomerase subunit LacA -
SSU16085_RS05495 () 1148172..1148687 + 516 WP_002935224.1 galactose-6-phosphate isomerase subunit LacB -
SSU16085_RS05500 () 1148697..1149629 + 933 WP_009909911.1 tagatose-6-phosphate kinase -
SSU16085_RS05505 () 1149631..1150608 + 978 WP_013730384.1 tagatose-bisphosphate aldolase -
SSU16085_RS05510 () 1150899..1152155 + 1257 WP_002936698.1 ISL3 family transposase ISSsu6 Transposase
SSU16085_RS05515 () 1152220..1153053 + 834 WP_192062937.1 PRD domain-containing protein -
SSU16085_RS05520 () 1153085..1153402 + 318 WP_003048451.1 PTS lactose/cellobiose transporter subunit IIA -
SSU16085_RS05525 () 1153402..1155081 + 1680 WP_192062938.1 lactose-specific PTS transporter subunit EIIC -
SSU16085_RS05530 () 1155316..1156722 + 1407 WP_002935218.1 6-phospho-beta-galactosidase -
SSU16085_RS05535 () 1156787..1157680 + 894 WP_192062939.1 aldose 1-epimerase family protein -
SSU16085_RS05540 () 1158084..1158898 - 815 Protein_1060 IS5 family transposase IS1515 Transposase
SSU16085_RS05545 () 1159083..1160087 - 1005 WP_002935211.1 IS5 family transposase ISSth7 Transposase
SSU16085_RS05550 () 1160324..1161277 - 954 WP_002935210.1 IS30 family transposase ISStin9 Transposase
SSU16085_RS05555 () 1161384..1162166 + 783 Protein_1063 IS982 family transposase ISSpy2 Transposase
SSU16085_RS05560 () 1162258..1163022 - 765 WP_002935208.1 DeoR/GlpR family DNA-binding transcription regulator -
SSU16085_RS05565 () 1163199..1164602 + 1404 WP_002935207.1 rhamnulokinase -
SSU16085_RS05570 () 1164713..1165351 + 639 WP_024405815.1 L-fuculose-phosphate aldolase -
SSU16085_RS05575 () 1165363..1165803 + 441 WP_002935205.1 RbsD/FucU family protein -
SSU16085_RS05580 () 1165796..1166227 + 432 WP_014637023.1 PTS sugar transporter subunit IIA -
SSU16085_RS05585 () 1166218..1166688 + 471 WP_002935202.1 PTS sugar transporter subunit IIB -
SSU16085_RS05590 () 1166711..1167484 + 774 WP_002935201.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
SSU16085_RS05595 () 1167481..1168281 + 801 WP_014637022.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
SSU16085_RS05600 () 1168339..1170630 + 2292 WP_002935195.1 glycoside hydrolase family 95 protein -
SSU16085_RS05605 () 1170734..1171597 + 864 Protein_1073 IS982 family transposase ISSpy2 Transposase
SSU16085_RS05610 () 1171638..1173404 + 1767 WP_002935191.1 L-fucose isomerase -
SSU16085_RS05615 () 1173540..1173980 + 441 Protein_1075 iron-containing alcohol dehydrogenase -
SSU16085_RS05625 () 1174870..1175589 + 720 Protein_1077 1,3-propanediol dehydrogenase VF
SSU16085_RS05630 () 1175801..1176424 - 624 Protein_1078 IS66 family transposase ISSwo2 Transposase
SSU16085_RS05635 () 1176500..1177252 - 753 WP_002935185.1 IS66 family transposase ISSwo2 Transposase
SSU16085_RS05640 () 1177227..1177411 - 185 Protein_1080 IS66 family transposase ISCsc1 Transposase
SSU16085_RS05645 () 1177463..1177813 - 351 WP_002935183.1 IS66 family transposase ISDeal1 Transposase
SSU16085_RS05650 () 1177794..1177979 - 186 WP_002935182.1 hypothetical protein -
SSU16085_RS05655 () 1178791..1179519 - 729 Protein_1083 Tyrosine recombinase XerC ; Integrase Integrase
SSU16085_RS05660 () 1179767..1180576 - 810 WP_002935179.1 Levansucrase VF
SSU16085_RS05665 () 1180761..1181351 - 591 WP_029694380.1 Tn3 family transposase TnpR_TnAs2 Transposase
SSU16085_RS05670 () 1181400..1182247 + 848 WP_114876528.1 IS630 family transposase -
SSU16085_RS05675 () 1182524..1182664 - 141 WP_014635984.1 hypothetical protein -
SSU16085_RS05680 () 1183017..1184297 + 1281 Protein_1088 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase -
SSU16085_RS05685 () 1184375..1185907 - 1533 WP_002935173.1 ATP-binding cassette domain-containing protein -
SSU16085_RS05690 () 1186207..1186698 + 492 WP_002935171.1 GNAT family N-acetyltransferase -
SSU16085_RS05695 () 1186754..1187494 - 741 WP_002940438.1 Arginine transport ATP-binding protein ArtM VF
SSU16085_RS05700 () 1187494..1189692 - 2199 WP_024394618.1 ABC transporter substrate-binding protein/permease -
SSU16085_RS05705 () 1189890..1191875 + 1986 WP_024394617.1 excinuclease ABC subunit B -
SSU16085_RS05710 () 1192109..1197844 + 5736 WP_074411038.1 Immunoglobulin A1 protease VF
SSU16085_RS05715 () 1197918..1198421 + 504 WP_014637015.1 GNAT family N-acetyltransferase -
SSU16085_RS05720 () 1198414..1198569 + 156 WP_024381332.1 DNA mismatch repair protein MutT -
SSU16085_RS05725 () 1198706..1198846 + 141 WP_002935125.1 hypothetical protein -
SSU16085_RS05730 () 1198843..1199646 + 804 WP_024394785.1 replication initiator protein A -
SSU16085_RS05735 () 1199795..1201150 + 1356 WP_002935123.1 DNA (cytosine-5-)-methyltransferase -
SSU16085_RS05740 () 1201134..1201562 + 429 WP_192062941.1 hypothetical protein -
SSU16085_RS05745 () 1201573..1201956 + 384 WP_192062942.1 hypothetical protein -
SSU16085_RS05750 () 1201965..1202198 + 234 WP_001005708.1 hypothetical protein -
SSU16085_RS05755 () 1202201..1202785 + 585 WP_192062943.1 CPBP family intramembrane metalloprotease -
SSU16085_RS05760 () 1202863..1203351 + 489 WP_192062944.1 hypothetical protein -
SSU16085_RS05765 () 1203351..1204625 + 1275 Protein_1105 type IV secretory system conjugative DNA transfer family protein -
SSU16085_RS05770 () 1205434..1207343 + 1910 Protein_1106 group II intron reverse transcriptase/maturase -
SSU16085_RS05775 () 1207366..1207986 + 621 WP_192062945.1 TraM recognition domain-containing protein -
SSU16085_RS05780 () 1208004..1208246 + 243 WP_001072171.1 hypothetical protein -
SSU16085_RS05785 () 1208265..1209119 + 855 WP_192062946.1 conjugal transfer protein TrbL -
SSU16085_RS05790 () 1209181..1209534 + 354 WP_001097579.1 PrgI family protein -
SSU16085_RS05795 () 1209491..1211842 + 2352 WP_192062947.1 AAA family ATPase -
SSU16085_RS05800 () 1211844..1214645 + 2802 WP_192062948.1 CHAP domain-containing protein -
SSU16085_RS05805 () 1214783..1215793 + 1011 WP_192062949.1 Abi family protein -
SSU16085_RS05810 () 1215908..1216192 + 285 Protein_1114 CHAP domain-containing protein -
SSU16085_RS05815 () 1216278..1217123 - 846 WP_192062950.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin Detail
SSU16085_RS05820 () 1217120..1217710 - 591 WP_192062951.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein Antitoxin Detail
SSU16085_RS05825 () 1217989..1222884 + 4896 WP_192062952.1 Agglutinin receptor VF
SSU16085_RS05830 () 1222885..1223076 + 192 WP_001068448.1 calcium-binding protein -
SSU16085_RS05835 () 1223060..1223611 + 552 WP_014636943.1 hypothetical protein -
SSU16085_RS05840 () 1223660..1229122 + 5463 WP_192062953.1 DEAD/DEAH box helicase family protein -
SSU16085_RS05845 () 1229620..1231398 + 1779 WP_192062954.1 reverse transcriptase/maturase family protein -
SSU16085_RS05850 () 1231491..1232003 + 513 Protein_1122 hypothetical protein -
SSU16085_RS05855 () 1231984..1232358 + 375 WP_001140406.1 TnpV protein -
SSU16085_RS05860 () 1232725..1234644 + 1920 WP_000691759.1 Tetracycline resistance protein TetO VF
SSU16085_RS05865 () 1234696..1234869 + 174 WP_011528024.1 cysteine-rich KTR domain-containing protein -
SSU16085_RS05870 () 1235359..1235868 + 510 WP_000872511.1 hypothetical protein VF
SSU16085_RS05875 () 1235963..1236388 + 426 WP_000323896.1 sigma-70 family RNA polymerase sigma factor -
SSU16085_RS05880 () 1236472..1236945 + 474 WP_000323521.1 sigma-70 family RNA polymerase sigma factor -
SSU16085_RS05885 () 1237099..1238130 + 1032 WP_001170965.1 AAA family ATPase -
SSU16085_RS05890 () 1238376..1238642 + 267 WP_162495498.1 hypothetical protein -
SSU16085_RS05895 () 1238649..1239614 + 966 WP_001145977.1 plasmid recombination protein -
SSU16085_RS05900 () 1239622..1240476 + 855 WP_000743701.1 ParB/RepB/Spo0J family partition protein -
SSU16085_RS05905 () 1240553..1240783 + 231 WP_000659121.1 hypothetical protein -
SSU16085_RS05910 () 1240854..1241045 + 192 WP_000503424.1 hypothetical protein -
SSU16085_RS05915 () 1241099..1242202 + 1104 Protein_1135 IS607 family transposase ISTsi1 Transposase
SSU16085_RS05920 () 1242291..1242530 + 240 WP_000635249.1 peptide-binding protein -
SSU16085_RS05925 () 1242579..1242662 + 84 WP_001814874.1 23S rRNA methyltransferase attenuation leader peptide -
SSU16085_RS05930 () 1242787..1243524 + 738 WP_001038795.1 rRNA adenine N-6-methyltransferase ARG
SSU16085_RS05935 () 1243694..1243954 + 261 Protein_1139 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
SSU16085_RS05940 () 1244057..1244953 + 897 WP_002326827.1 ParA family protein -
SSU16085_RS05945 () 1245072..1245281 + 210 WP_000527318.1 peptide-binding protein -
SSU16085_RS05950 () 1245299..1245571 + 273 WP_002326825.1 antitoxin Antitoxin Detail
SSU16085_RS05955 () 1245573..1245842 + 270 WP_002943355.1 zeta toxin family protein Toxin Detail
SSU16085_RS05960 () 1245940..1246287 + 348 Protein_1144 DUF4368 domain-containing protein -
SSU16085_RS05965 () 1246254..1247213 + 960 Protein_1145 hypothetical protein -
SSU16085_RS05970 () 1247284..1247583 + 300 WP_024408864.1 hypothetical protein -
SSU16085_RS05975 () 1247597..1247887 + 291 WP_024408865.1 membrane protein -
SSU16085_RS05980 () 1247983..1248621 + 639 WP_192062955.1 peptidylprolyl isomerase -
SSU16085_RS05985 () 1248660..1249736 + 1077 WP_044763948.1 toprim domain-containing protein -
SSU16085_RS05990 () 1249790..1250017 + 228 WP_000110922.1 hypothetical protein -
SSU16085_RS05995 () 1250014..1250403 + 390 WP_000048066.1 hypothetical protein -
SSU16085_RS06000 () 1250453..1250749 + 297 WP_002936411.1 hypothetical protein -
SSU16085_RS06005 () 1250942..1252354 + 1413 WP_192062956.1 hypothetical protein -
SSU16085_RS06010 () 1252822..1253184 + 363 WP_023370192.1 hypothetical protein -
SSU16085_RS06015 () 1253187..1253552 + 366 WP_023370194.1 plasmid mobilization relaxosome protein MobC -
SSU16085_RS06020 () 1253539..1255422 + 1884 WP_024383752.1 relaxase/mobilization nuclease domain-containing protein -
SSU16085_RS06025 () 1256534..1256974 + 441 WP_023370198.1 hypothetical protein -
SSU16085_RS06030 () 1257009..1257347 + 339 WP_024383751.1 hypothetical protein -
SSU16085_RS06035 () 1257631..1259769 + 2139 WP_023370200.1 ABC transporter ATP-binding protein YtrE VF
SSU16085_RS06040 () 1260231..1261421 - 1191 Protein_1160 IS110 family transposase ISSsu7 Transposase
SSU16085_RS06045 () 1261813..1262010 + 198 WP_023370204.1 helix-turn-helix transcriptional regulator -
SSU16085_RS06050 () 1262283..1262423 + 141 WP_023370206.1 hypothetical protein -
SSU16085_RS06055 () 1262522..1264096 + 1575 Protein_1163 IS607 family transposase ISCbt3 Transposase
SSU16085_RS06060 () 1264096..1265712 + 1617 WP_192062957.1 hypothetical protein ; Integrase Integrase
SSU16085_RS06065 () 1265705..1267141 + 1437 WP_192062958.1 hypothetical protein ; Integrase Integrase
SSU16085_RS06070 () 1267251..1267595 + 345 Protein_1166 8-oxo-dGTP diphosphatase -
SSU16085_RS06075 () 1267794..1268126 + 333 WP_192063042.1 transporter substrate-binding domain-containing protein -
SSU16085_RS06080 () 1268105..1268365 - 261 Protein_1168 transporter substrate-binding domain-containing protein -
SSU16085_RS06085 () 1268313..1268606 + 294 WP_002935161.1 transporter substrate-binding domain-containing protein -
SSU16085_RS06090 () 1268778..1269578 + 801 WP_024394614.1 transporter substrate-binding domain-containing protein -
SSU16085_RS06095 () 1269852..1271690 - 1839 WP_009909892.1 1,4-alpha-glucan branching protein GlgB -
SSU16085_RS06100 () 1271763..1273208 - 1446 WP_024394613.1 glycogen synthase GlgA -
SSU16085_RS06105 () 1273217..1274332 - 1116 WP_011922501.1 glucose-1-phosphate adenylyltransferase subunit GlgD -
SSU16085_RS06110 () 1274345..1275472 - 1128 WP_192062959.1 glucose-1-phosphate adenylyltransferase -
SSU16085_RS06115 () 1275636..1276547 - 912 WP_012775137.1 HTH-type transcriptional regulator GltC VF
SSU16085_RS06120 () 1276644..1277534 + 891 WP_079269348.1 dihydroorotate dehydrogenase electron transfer subunit -
SSU16085_RS06125 () 1277544..1278485 + 942 WP_043032921.1 dihydroorotate dehydrogenase -
SSU16085_RS06130 () 1278650..1279345 + 696 WP_043032920.1 orotidine-5'-phosphate decarboxylase -
SSU16085_RS06135 () 1279338..1279664 + 327 WP_029175038.1 inorganic diphosphatase -
SSU16085_RS06140 () 1279801..1280433 + 633 WP_014637891.1 orotate phosphoribosyltransferase -
SSU16085_RS06145 () 1280542..1281468 + 927 WP_029175039.1 Putative glycosyltransferase CsbB VF
SSU16085_RS06150 () 1281478..1282131 + 654 WP_024387776.1 uracil-DNA glycosylase -
SSU16085_RS06155 () 1282171..1283442 + 1272 WP_029175040.1 dihydroorotase -
SSU16085_RS06160 () 1283573..1285687 + 2115 WP_032512641.1 Mannosylglucosyl-3-phosphoglycerate phosphatase VF
SSU16085_RS06165 () 1285739..1286386 + 648 WP_024394605.1 Maf family protein -
SSU16085_RS06170 () 1286438..1286926 + 489 WP_002936504.1 YkgJ family cysteine cluster protein -
SSU16085_RS06175 () 1287376..1288335 + 960 WP_024394604.1 hypothetical protein -
SSU16085_RS06180 () 1288332..1290884 + 2553 WP_114876508.1 G5 domain-containing protein -
SSU16085_RS06185 () 1290874..1291368 + 495 WP_024394602.1 PcfB family protein -
SSU16085_RS06190 () 1291389..1292711 + 1323 WP_192063043.1 type IV secretory system conjugative DNA transfer family protein -
SSU16085_RS06195 () 1293463..1295372 + 1910 Protein_1191 group II intron reverse transcriptase/maturase -
SSU16085_RS06200 () 1295398..1295985 + 588 WP_074413321.1 TraM recognition domain-containing protein -
SSU16085_RS06205 () 1296058..1296366 + 309 WP_014637004.1 single-stranded DNA-binding protein -
SSU16085_RS06210 () 1296366..1296581 + 216 WP_014637003.1 Maff2 family protein -
SSU16085_RS06215 () 1296590..1297453 + 864 WP_024394600.1 hypothetical protein -
SSU16085_RS06220 () 1297466..1297834 + 369 WP_023370251.1 PrgI family protein -
SSU16085_RS06225 () 1297791..1300220 + 2430 Protein_1197 ATP-binding protein -
SSU16085_RS06230 () 1300228..1300788 + 561 WP_024394599.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance